Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001695-TA|BGIBMGA001695-PA|IPR011682|Glycosyl hydrolases
38, C-terminal, IPR011013|Galactose mutarotase-like
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_05_0014 + 18392622-18392834,18393064-18393147,18393709-183937... 209 5e-54
10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245... 145 1e-34
06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850 78 3e-14
03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187 34 0.31
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 33 0.94
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680... 31 3.8
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 31 3.8
05_03_0145 + 8881484-8882377 31 3.8
11_03_0063 + 9515666-9516656,9517503-9518599 30 5.0
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 30 5.0
02_02_0599 - 12010099-12010134,12010429-12010542,12011873-120119... 30 6.6
02_05_0564 + 30003817-30005778 29 8.8
>11_05_0014 +
18392622-18392834,18393064-18393147,18393709-18393797,
18393889-18394063,18394370-18394489,18394591-18394677,
18394755-18394826,18395166-18395279,18395387-18395487,
18395576-18395669,18395794-18395961,18396287-18396352,
18396475-18396531,18396708-18396927,18397015-18397151,
18397573-18397641,18397722-18397781,18397927-18397998,
18398171-18398218,18398376-18398495,18398743-18398808,
18399341-18399453,18399821-18399905,18400246-18400356,
18400436-18400531,18401075-18401143,18401235-18401453
Length = 974
Score = 209 bits (511), Expect = 5e-54
Identities = 159/502 (31%), Positives = 254/502 (50%), Gaps = 46/502 (9%)
Query: 113 LQVTVYNPLAWGVREAVKLPVTYGHYEVYAPNGDKIVTQLVEIPDEVKRIPNRRSEATHE 172
L V VYN L W + +++PV V+ G ++ +QL+ I + + + H
Sbjct: 461 LVVLVYNSLGWKREDVLRIPVISDSIVVHDSEGREVESQLLPIANASLYMREK-----HV 515
Query: 173 LVFIAHLHPLGVKSFYVKRVSTTKRAIANGSYLEWISGEGVRSDGYLDRLNQIADVKDLT 232
++ L P F++ + N ++ SG+ S + L+ + + +
Sbjct: 516 KAYLGML-PAAKPKFWLAFPVSVPPLGFNTYFIS--SGKKSASVSLMSTLHS-SQGSENS 571
Query: 233 NLGLDAIVDEGKEPLWEDANGTGAAFKGTMKKRETDDFKISFAYYPGCLGNNEVPANRSS 292
N+ + +G+ L +A G + + + + E + F+ + YY G GN P ++S
Sbjct: 572 NMQ----IGQGQLKLQYNAAGALSLYSNSKTQVEAN-FEQKYKYYIGQDGNGSDP--QAS 624
Query: 293 GAYIFRPNSTKAIGLNVE-SVSEISGDLLSEVRTKIRGNVLSIKRVYKEFDFIEHEWLVG 351
GAYIFRPN T I + + ++ + G +L EV +I + I RVYK D++E E++VG
Sbjct: 625 GAYIFRPNGTVPIKTDGQVPLTVLRGSILDEVHQQINPWIYQINRVYKGKDYVETEFIVG 684
Query: 352 PISVDDGIGKEYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYYP 411
PI VDDG GKE + T++ N FYTDS+GR +KR + R +W + + +P+ GNYYP
Sbjct: 685 PIPVDDGNGKELSTEVVTNMATNKTFYTDSSGRDFIKRIRDYRSEWKIEVHQPIAGNYYP 744
Query: 412 VTNEIYIENGER-FTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNETVL--- 467
V IY+E+G R ++L DRS GG S+ +G++ELMLHRRLLHDD GV EALNET
Sbjct: 745 VNLGIYVEDGSRELSILVDRSVGGASIKDGQIELMLHRRLLHDDGRGVAEALNETTCFDN 804
Query: 468 -GSGLVVRGKHRILRSKDPVEIA--KSVF--QMHLPPVVFVSDASGLSYEQWMRLENCKK 522
GLV++GK+ L+ E A + F +++ P ++ ++ G W+ K
Sbjct: 805 QCEGLVIQGKY-YLKIDPQGEGARWRRTFGQEIYSPLLIAFAEQDG---GNWVNSHVTKF 860
Query: 523 FVKTP---MPDGLHLLTLEPWGDQILLRIENYKTGAEDSTIEIDLQGIFNGIHIKSVKET 579
P +PD + LLTL+ + L + +DL+ +F I + ET
Sbjct: 861 SAMDPAYSLPDNVALLTLQAGEHKDL-----------SALASVDLKRVFPDKKIVKIVET 909
Query: 580 TLAANQWLDDYDK--WTWNTEG 599
+L+ANQ +K W EG
Sbjct: 910 SLSANQERSAMEKKRLKWKVEG 931
Score = 44.8 bits (101), Expect = 2e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Query: 2 QHHDAITGTEKQHVAHDYERILS 24
QHHDA+TGTEKQHVA+DY + LS
Sbjct: 412 QHHDAVTGTEKQHVANDYAKRLS 434
>10_01_0232 +
2456449-2456652,2456814-2456897,2459113-2459201,
2459245-2459452,2459764-2459883,2460004-2460087,
2460171-2460242,2460342-2460455,2460852-2460952,
2461024-2461117,2461265-2461432,2461539-2461616,
2461908-2461973,2462052-2462108,2462353-2462572,
2462867-2463003,2465379-2465450,2465530-2465577,
2465681-2465806,2465982-2466047,2466508-2466620,
2467348-2467432,2467885-2467980,2468067-2468114,
2468190-2468258,2468393-2468581
Length = 935
Score = 145 bits (351), Expect = 1e-34
Identities = 72/155 (46%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 315 ISGDLLSEVRTKIRGNVLSIKRVYKEFDFIEHEWLVGPISVDDG--IGKEYVVKYQTDII 372
I G L+ EV + + + R+YK + E E+ +GPI VDD IGKE V + T++
Sbjct: 638 IHGPLVDEVHQQFSSWIYQVTRLYKNKEHAEVEYTIGPIPVDDDDDIGKEVVTRLTTNMA 697
Query: 373 NNGEFYTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYYPVTNEIYIENGE-RFTVLTDRS 431
N FYTDSNGR L+R N R W+L L++PV GNYYPV IY+ +G+ +VL D +
Sbjct: 698 TNKIFYTDSNGRDFLERVRNHRDDWDLNLSQPVAGNYYPVNQGIYVADGKYELSVLVDHA 757
Query: 432 QGGTSLVEGEVELMLHRRLLHDDAFGVGEALNETV 466
G +S+ +G++E+MLHRRL DD GVGE LNE V
Sbjct: 758 VGASSIQDGQIEVMLHRRLSADDGRGVGEPLNEVV 792
Score = 38.7 bits (86), Expect = 0.014
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 113 LQVTVYNPLAWGVREAVKLPVTYGHYEVYAPNGDKIVTQLVEIPDEVKRIPNRRSEA--- 169
L + VYNPL W + V++PV + V +G + +QLVE+ R+ +A
Sbjct: 494 LVIVVYNPLGWERSDFVRVPVNDANLIVKTSDGTSLESQLVEVDIVTARLRKLYIKAYLG 553
Query: 170 -------THELVFIAHLHPLGVKSFYVKRVSTT 195
+ LVF A + PLG ++++ + + T
Sbjct: 554 ITSDKPPKYWLVFQASVPPLGWNTYFISKSTGT 586
Score = 36.7 bits (81), Expect = 0.058
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAI 27
QHHDA++GT KQH DY + L+ +
Sbjct: 419 QHHDAVSGTAKQHTTDDYSKRLAIGV 444
>06_01_0976 - 7576334-7579090,7581001-7581150,7581236-7581850
Length = 1173
Score = 77.8 bits (183), Expect = 3e-14
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 28/190 (14%)
Query: 289 NRSSGAYIFRP-NSTKAI----GLNVESVSEISGDLLSEVRTKIRGNVLSIK-RVYKEFD 342
+ SGAY+F+P ++I G + S + + S +T+ + +S R+Y D
Sbjct: 800 SHGSGAYLFKPIGEAQSIVEEGGYFILSEGPLVQEAHSLPKTQWHKSPISHSTRIYSCGD 859
Query: 343 FIE--------HEWLVGPISVDDGIGKEYVVKYQTDIINNGEFYTDSNGRQMLKRKLNAR 394
I+ H LVG + D KE +V+++TDI N G FY+D NG QM +R+ +
Sbjct: 860 SIQDMLIEKEYHVELVGHVFND----KELIVRFKTDIDNQGVFYSDLNGFQMSRRQTYDK 915
Query: 395 PQWNLTLTEPVPGNYYPVTNEIYIEN--GERFTVLTDRSQGGTSLVEGEVELMLHRRLLH 452
P+ GNYYP+ + ++++ G RF+V + +S G SL G +E+ML RRL
Sbjct: 916 I--------PLQGNYYPMPSLAFLQDSLGNRFSVHSKQSLGAASLKNGWLEIMLDRRLTQ 967
Query: 453 DDAFGVGEAL 462
DD G+G+ +
Sbjct: 968 DDGRGLGQGV 977
Score = 36.7 bits (81), Expect = 0.058
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAIDD 29
QHHD +TGT K HV DY + T++ D
Sbjct: 564 QHHDGVTGTAKDHVVVDYGTRMHTSLQD 591
>03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187
Length = 297
Score = 34.3 bits (75), Expect = 0.31
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 35 DRPSTY-DRLNRTTTFSKAAQGDSGKAPLFSYDRCHFNESRCHTSETSETFMRLR-GSE- 91
DR +T D LNRTTT + + KA S C E++C T ET+ +R R GSE
Sbjct: 196 DRGATVEDILNRTTTVEDISLAAASKAT--SDHHCVAGEAQCGTHETARLDLRRRSGSEA 253
Query: 92 -SGS-VVGR 98
+GS VVGR
Sbjct: 254 VAGSRVVGR 262
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 32.7 bits (71), Expect = 0.94
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 370 DIINNGEFYTDSNGRQMLKRKL---NARPQWNLTLTEPVPGNYYPVTNEIY 417
DI+++ + + G+Q K K+ N P WN LT VP Y P+ ++Y
Sbjct: 982 DILSSDPYVVLTLGQQKAKTKVIKSNLNPVWNEVLTLSVPQKYGPLKLQVY 1032
>09_06_0205 -
21567467-21567655,21567791-21567876,21567965-21568037,
21568267-21568326,21568887-21568935,21569328-21569431,
21569587-21569640,21569719-21569763,21569817-21569879,
21570415-21570615,21570620-21570797,21570900-21570993,
21571075-21572478,21572560-21572604,21572710-21572788,
21573424-21573589,21573679-21573771,21573872-21573929,
21574063-21574120,21574210-21574367,21575130-21575177,
21575269-21575320,21575404-21575529
Length = 1160
Score = 30.7 bits (66), Expect = 3.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 301 STKAIGLNVESVSEISGDLLSEVRTKIRGNVLSIKRVYK 339
S+++ GLN E+++ +S + EVRTK RG S ++ K
Sbjct: 90 SSRSFGLNGEALASLSDISVVEVRTKARGRPNSYCKIIK 128
>07_03_1486 +
26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 30.7 bits (66), Expect = 3.8
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 321 SEVRTKIRGNVLSIKRVYKEFDFIEHEWLVGPISVDDGIGKEYVVKYQTDIINNGEFYTD 380
S +R+ +R + S R + ++ + P D+G+GK VV Y + NG +
Sbjct: 28 SSIRSPVRPVISSRSRSTSP---LSNQRIDSPADYDNGMGKRRVVNYADPLFENGSAPIE 84
Query: 381 SNGRQMLKRKLNAR-PQWNLTLT-EPVPG--NYYPV 412
Q + AR P N+T P G NY+PV
Sbjct: 85 DMRTQPSEFGKTARSPTSNITSKFRPPSGFQNYHPV 120
>05_03_0145 + 8881484-8882377
Length = 297
Score = 30.7 bits (66), Expect = 3.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 566 GIFNGIHIKSVKETTLAANQWLDDYDKW 593
G+F+ IH+K + A+ W+ + KW
Sbjct: 204 GLFHRIHVKKFSDGRCPASSWIQSFQKW 231
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 3 HHDAITGTEKQHVAHDYERILSTAIDDAYSSPDRPSTYDRLNRTTTFSK 51
H + + G K + +Y+R+ I+DAY+ P++ +R+ + FSK
Sbjct: 621 HAEEVRG--KSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSK 667
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 30.3 bits (65), Expect = 5.0
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 3 HHDAITGTEKQHVAHDYERILSTAIDDAYSSPDRPSTYDRLNRTTTFSK 51
H + + G K + +Y+R+ I+DAY+ P++ +R+ + FSK
Sbjct: 395 HAEEVIG--KSRMVINYKRLNDNTIEDAYNIPNKQEWINRIQGSKYFSK 441
>02_02_0599 -
12010099-12010134,12010429-12010542,12011873-12011980,
12012327-12012440,12013935-12014062,12014228-12014519
Length = 263
Score = 29.9 bits (64), Expect = 6.6
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 252 NGTGAAFKGTMKKRETDDFKISFAYYPGCLGNNEVPANRSSGAYIFRPNSTKAIGLNVES 311
+G GA F+G ++ + + K+ A NN P + SG +A+GL+++S
Sbjct: 74 DGEGA-FRGEVRS-DIEQLKLQLARLESMWDNNSKPLDGKSGPLEEDGEVVRAMGLDIQS 131
Query: 312 V----SEISGDLLSEVRTKIRGNVLSIKRVYKEFD 342
+ I +L + K+ N+ +I + K+ D
Sbjct: 132 LINEHENIKIQILMDESRKMNSNIHNIWSMAKDTD 166
>02_05_0564 + 30003817-30005778
Length = 653
Score = 29.5 bits (63), Expect = 8.8
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 406 PGNYYPV-TNEIYIENGERFTVLTDRSQGGTSLVEGEVELM 445
P Y P +NE+YI N +F VL R +GG V G E M
Sbjct: 153 PVGYTPEGSNEVYIINHLKFKVLVHRYEGGKVKVVGTGEGM 193
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,854,868
Number of Sequences: 37544
Number of extensions: 892772
Number of successful extensions: 1808
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1786
Number of HSP's gapped (non-prelim): 19
length of query: 650
length of database: 14,793,348
effective HSP length: 87
effective length of query: 563
effective length of database: 11,527,020
effective search space: 6489712260
effective search space used: 6489712260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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