Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001695-TA|BGIBMGA001695-PA|IPR011682|Glycosyl hydrolases
38, C-terminal, IPR011013|Galactose mutarotase-like
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0) 219 4e-57
SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0) 219 4e-57
SB_41673| Best HMM Match : Glyco_hydro_38 (HMM E-Value=2.3e-24) 60 5e-09
SB_33863| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.54
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 31 2.2
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 31 2.2
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 31 3.8
SB_57753| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 3.8
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 3.8
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_39038| Best HMM Match : BEX (HMM E-Value=3) 30 5.0
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 30 5.0
SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_56312| Best HMM Match : Calx-beta (HMM E-Value=2) 30 6.7
SB_56290| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_58667| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.8
SB_708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.8
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.8
>SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0)
Length = 965
Score = 219 bits (536), Expect = 4e-57
Identities = 194/614 (31%), Positives = 293/614 (47%), Gaps = 99/614 (16%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAIDDAYSSPDRPSTYDRLNRTTTFSKAAQGDSGKAP 61
QHHDA++GT KQHVA DY + L+ D + L K+ + P
Sbjct: 361 QHHDAVSGTSKQHVADDYAKRLAIGAADCQA----------LMSNVIGKKSIKSKGNAPP 410
Query: 62 LFSYDRCH-FNESRCHTSETSETFMRLRGSESGSVVGRISTKRLDAAYKPAVLQVTVYNP 120
+FS C+ N S C ++E S++F VV AY P +T Y
Sbjct: 411 VFS--SCNLLNVSSCPSTEDSKSF----------VVN---------AYNPIARDITSY-- 447
Query: 121 LAWGVREAVKLPVTYGHYEVYAPNGDKIVTQLVEIPDEVKRIPNRR----SEATHELVFI 176
+R V LP++ VY P G I +QL+ I E + + S + +EL+F
Sbjct: 448 ----IRVPVNLPMS-----VYNPQGAAIKSQLLPISQETMTLRRMQKLSASNSKYELIFK 498
Query: 177 AHLHPLGVKSFYVKRVSTTKRAIANGSYLE---WISGEGVRSDGYLDRLNQIADVKDLTN 233
L PLG S++V T+ + ++ I E ++ L+ + +T+
Sbjct: 499 VKLPPLGFASYFVNTSKTSSKMYGKSFAVDPSTVIQNEFIK----LEFSRDTGRLTSMTD 554
Query: 234 LGLDAIVDEGKEPLWEDANGTGAAFKGTMKKRETDDFKISFAYYPGCLGNNEVPANRSSG 293
L + ++ LW +A+ D + S AY ++ P N + G
Sbjct: 555 LVSEVTTQVDQQFLWYNAS--------------VDQGQPSGAYIFRPNTSSTTPVN-AGG 599
Query: 294 AYIFRPNSTKAIGLNVESVSEISGDLLSEVRTKIRGNVLSIKRVYKEFDFIEHEWLVGPI 353
F T G V+ V ++ +S+V +R L + + EF++ VGPI
Sbjct: 600 KATF----TVYQGPLVQEVRQVFSPYVSQV---VR---LYYGQKHAEFEY-----TVGPI 644
Query: 354 SVDDGIGKEYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYYPVT 413
D +G+E + ++ +DI +N FYTD+NGR+M R + RP W L TEPV GNYYPV
Sbjct: 645 --PDDLGREVITRFDSDIKSNKVFYTDANGREMQLRTRDFRPTWKLNNTEPVAGNYYPVN 702
Query: 414 NEIYIENGER-FTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNET-VLGSGL 471
+ I++++ R T+LTDRS GG+SL +G VELMLHRRLL DD GV E LNE+ + G GL
Sbjct: 703 SRIFVKDSNRQLTLLTDRSLGGSSLKDGSVELMLHRRLLVDDKRGVDEPLNESGISGKGL 762
Query: 472 VVRGKHRILRSKDPVEIA---KSVFQMHLPPVV-FVSDASGLSYEQWM-RLENCKKFVKT 526
+VRGK ++ + A + QM L P+V F + S + E+W+ + + V
Sbjct: 763 IVRGKVNVVLAPPATSAATHRELGEQMMLEPIVSFAQNPS--TVEKWLAKYNSLYTGVAR 820
Query: 527 PMPDGLHLLTLEPWGDQILLRIENYKTGAEDS----TIEIDLQGIFNGIHIKSVKETTLA 582
+P +H+LTLE L+R+E+ EDS + + LQG+F + + V+E LA
Sbjct: 821 QLPSNVHMLTLETSNQYALIRLEHQFEADEDSKLSMPVNVSLQGLFTDLEVSKVEELNLA 880
Query: 583 ANQWLDDYDKWTWN 596
ANQ L D WN
Sbjct: 881 ANQLLKDKHPMQWN 894
>SB_40313| Best HMM Match : Glyco_hydro_38 (HMM E-Value=0)
Length = 887
Score = 219 bits (536), Expect = 4e-57
Identities = 194/614 (31%), Positives = 293/614 (47%), Gaps = 99/614 (16%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAIDDAYSSPDRPSTYDRLNRTTTFSKAAQGDSGKAP 61
QHHDA++GT KQHVA DY + L+ D + L K+ + P
Sbjct: 349 QHHDAVSGTSKQHVADDYAKRLAIGAADCQA----------LMSNVIGKKSIKSKGNAPP 398
Query: 62 LFSYDRCH-FNESRCHTSETSETFMRLRGSESGSVVGRISTKRLDAAYKPAVLQVTVYNP 120
+FS C+ N S C ++E S++F VV AY P +T Y
Sbjct: 399 VFS--SCNLLNVSSCPSTEDSKSF----------VVN---------AYNPIARDITSY-- 435
Query: 121 LAWGVREAVKLPVTYGHYEVYAPNGDKIVTQLVEIPDEVKRIPNRR----SEATHELVFI 176
+R V LP++ VY P G I +QL+ I E + + S + +EL+F
Sbjct: 436 ----IRVPVNLPMS-----VYNPQGAAIKSQLLPISQETMTLRRMQKLSASNSKYELIFK 486
Query: 177 AHLHPLGVKSFYVKRVSTTKRAIANGSYLE---WISGEGVRSDGYLDRLNQIADVKDLTN 233
L PLG S++V T+ + ++ I E ++ L+ + +T+
Sbjct: 487 VKLPPLGFASYFVNTSKTSSKMYGKSFAVDPSTVIQNEFIK----LEFSRDTGRLTSMTD 542
Query: 234 LGLDAIVDEGKEPLWEDANGTGAAFKGTMKKRETDDFKISFAYYPGCLGNNEVPANRSSG 293
L + ++ LW +A+ D + S AY ++ P N + G
Sbjct: 543 LVSEVTTQVDQQFLWYNAS--------------VDQGQPSGAYIFRPNTSSTTPVN-AGG 587
Query: 294 AYIFRPNSTKAIGLNVESVSEISGDLLSEVRTKIRGNVLSIKRVYKEFDFIEHEWLVGPI 353
F T G V+ V ++ +S+V +R L + + EF++ VGPI
Sbjct: 588 KATF----TVYQGPLVQEVRQVFSPYVSQV---VR---LYYGQKHAEFEY-----TVGPI 632
Query: 354 SVDDGIGKEYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYYPVT 413
D +G+E + ++ +DI +N FYTD+NGR+M R + RP W L TEPV GNYYPV
Sbjct: 633 --PDDLGREVITRFDSDIKSNKVFYTDANGREMQLRTRDFRPTWKLNNTEPVAGNYYPVN 690
Query: 414 NEIYIENGER-FTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNET-VLGSGL 471
+ I++++ R T+LTDRS GG+SL +G VELMLHRRLL DD GV E LNE+ + G GL
Sbjct: 691 SRIFVKDSNRQLTLLTDRSLGGSSLKDGSVELMLHRRLLVDDKRGVDEPLNESGISGKGL 750
Query: 472 VVRGKHRILRSKDPVEIA---KSVFQMHLPPVV-FVSDASGLSYEQWM-RLENCKKFVKT 526
+VRGK ++ + A + QM L P+V F + S + E+W+ + + V
Sbjct: 751 IVRGKVNVVLAPPATSAATHRELGEQMMLEPIVSFAQNPS--TVEKWLAKYNSLYTGVAR 808
Query: 527 PMPDGLHLLTLEPWGDQILLRIENYKTGAEDS----TIEIDLQGIFNGIHIKSVKETTLA 582
+P +H+LTLE L+R+E+ EDS + + LQG+F + + V+E LA
Sbjct: 809 QLPSNVHMLTLETSNQYALIRLEHQFEADEDSKLSMPVNVSLQGLFTDLEVSKVEELNLA 868
Query: 583 ANQWLDDYDKWTWN 596
ANQ L D WN
Sbjct: 869 ANQLLKDKHPMQWN 882
>SB_41673| Best HMM Match : Glyco_hydro_38 (HMM E-Value=2.3e-24)
Length = 687
Score = 60.1 bits (139), Expect = 5e-09
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
Query: 361 KEYVVKYQTDIIN-NGEFYTDSNGRQMLKRKLNARPQWNLTLTE-PVPGNYYPVTNEIYI 418
KE+V++ +TDI N N EFY+D NG +R+ TL + P+ N+YP+ ++
Sbjct: 569 KEFVMRLRTDIQNKNREFYSDLNGFSYQRRR---------TLDKLPIQANFYPMPTMAFL 619
Query: 419 ENGE-RFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNE 464
E+ R ++L+ + G L G +E+++ RRLL DD G+G+ + +
Sbjct: 620 EDSNHRLSLLSAQPNGVAGLQTGMLEVVMDRRLLQDDNRGLGQGVTD 666
Score = 33.9 bits (74), Expect = 0.41
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAIDD 29
QHHDAITGT K V DY L ++ D
Sbjct: 301 QHHDAITGTAKDFVVVDYGNRLHRSLQD 328
>SB_33863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 33.5 bits (73), Expect = 0.54
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 419 ENGERFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNE 464
++ R ++L+ + G L G +E+++ RRLL DD G+G+ + +
Sbjct: 6 DSNHRLSLLSAQPNGVAGLQTGMLEVVMDRRLLQDDNRGLGQGVTD 51
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ +EG+E
Sbjct: 985 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEEEGEE 1031
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 410 YPVTNEIYIENGERFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGE 460
Y + N+ YI NGE F VL + G +L E +++ ++ + +L+ D G G+
Sbjct: 120 YDMDNDGYISNGELFQVL--KMMVGNNLKETQLQQIVDKTILNADKDGDGK 168
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKEPLWED 250
A +++ W GEG+ + + +A + KD +G+D++ EG+E E+
Sbjct: 337 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 388
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKEPLWED 250
A +++ W GEG+ + + +A + KD +G+D++ EG+E E+
Sbjct: 833 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 884
>SB_57753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 30.7 bits (66), Expect = 3.8
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 219 LDRLNQIADVKDLTNLGLDAIVDEGKEPLWEDANGTGAAFKGTMKKRETDD 269
+D+L +++ V+ + LD + + ++ L ED G AA K +KKRE DD
Sbjct: 26 MDQLQRLSTVEKNLHETLDLYIMQERKRL-EDLKGIYAAKKEELKKRERDD 75
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKEPLWED 250
A +++ W GEG+ + + +A + KD +G+D++ EG+E E+
Sbjct: 325 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 376
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKEPLWED 250
A +++ W GEG+ + + +A + KD +G+D++ EG+E E+
Sbjct: 198 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 249
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 30.3 bits (65), Expect = 5.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ EG+E
Sbjct: 14 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEE 60
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 30.3 bits (65), Expect = 5.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ EG+E
Sbjct: 1180 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEE 1226
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 594 TWNTEGDFYE----SFNKKYGSFEAVNKAVDGPDVREDEGLKIKLKAKEIRSFIADIE 647
T+NT+G+ E SFNKK S + ++D P + + L+ K KE + ++I+
Sbjct: 245 TFNTKGEISERKEESFNKKTNSSSQTDLSIDTPPDKRELKLEYKESVKERQRLQSEID 302
>SB_39038| Best HMM Match : BEX (HMM E-Value=3)
Length = 349
Score = 30.3 bits (65), Expect = 5.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 17/72 (23%)
Query: 319 LLSEVRTKIRGNVLSIKRVYKEFDFIEHEWLVGPISVDDGIGKEYVVKYQTDIINNGEFY 378
++ VR + G++ ++ RV + EW+VGPI G YVV + GE Y
Sbjct: 47 MIPSVRESLEGSIPTVDRV-------KQEWVVGPIGAS---GLRYVV-------HPGEVY 89
Query: 379 TDSNGRQMLKRK 390
D GR + + K
Sbjct: 90 IDRGGRGLFESK 101
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 30.3 bits (65), Expect = 5.0
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ EG+E
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEE 446
>SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 29.9 bits (64), Expect = 6.7
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 487 EIAKSVFQMHLPPVVFVSDASGLSYEQWMRLENCKKFVKTPMPDGLHLLTLEPWGDQILL 546
E + S F+M LP V + + L + C+ + + L PW +I L
Sbjct: 20 ENSASSFKMQLPSQVRLDEDWELGLSNIIYPHTCQNVLDNDIFYNLESTGEFPWNARIYL 79
Query: 547 RIENYKTGAE-DSTIEIDLQGIFNGIHIKS 575
NYKT S + + L N IH KS
Sbjct: 80 PSGNYKTVDNLISAMVVGLHSSLNDIHDKS 109
>SB_56312| Best HMM Match : Calx-beta (HMM E-Value=2)
Length = 311
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 412 VTNEIYIENGERFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGVGEALNETVLGSGL 471
VT E ++E+ ERF ++ +Q ++VE + +H + +DDA GV +T +G
Sbjct: 101 VTKEAFVEHPERFDIVMTTNQPFVTVVENKSMSEIH--VQNDDA-GVSTTHIDTTVGRDF 157
Query: 472 V 472
+
Sbjct: 158 I 158
>SB_56290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 29.9 bits (64), Expect = 6.7
Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 12/165 (7%)
Query: 110 PAVLQVTVYNPLAWGVREAVKLPVTYGHYEV----YAPNGDKIVTQLVEIPDEVKRIPNR 165
P +LQV P A E V L YG Y+ YA N + + + D V
Sbjct: 300 PGILQVYRATPHARKDTETVNLEERYGQYQQKLRDYAENRRGAIPHDLSVGDIVFVANMN 359
Query: 166 RSEATHELVFIAH--LHPLGVKSFYVKRVSTTKRAIANGSYLEWISGEGVRSDGYLDRLN 223
RS+ + H L G +F V V++ K ++ N YL V L
Sbjct: 360 RSKLDPRYLGDRHVILRQKGDGAFDVVNVNSGKLSVRNAKYLRKAPTHQVNLPALLTENG 419
Query: 224 QIADVKDLTNLGLDAIVDEGKEPLWEDANGTGAAFKGTMKKRETD 268
+A + +T GL E + L D+ + K +RE D
Sbjct: 420 AVAQ-QSVTPEGL-----ENHDLLTGDSGREVSTEKAVQSEREVD 458
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 29.9 bits (64), Expect = 6.7
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 362 EYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYY 410
E+ + Y TD I N YT++ ++ + + R N+T++ P+ G ++
Sbjct: 881 EFYLSY-TDDITNWSNYTEAGTTKIFQGNTDGRNTKNITISPPIVGQFF 928
>SB_58667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 8.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 409 YYPVTNEIYIENGERFTVLTDRSQGGTSLVEGEVELMLH 447
Y+PV N+ +EN ERF V ++ G + +H
Sbjct: 35 YFPVVNDQLVENTERFNVTLSTEDPRVTINPGYASIHIH 73
>SB_708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.5 bits (63), Expect = 8.8
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 538 EPWGDQILLRIENYKTGAEDST-IEIDLQGIFNGIHIKSVKETTLAANQWLDDYDKWTWN 596
E WGD+ ++IE + + E D Q +F + K W D D W+
Sbjct: 6 EDWGDEFSIKIEPTSPPPDSAQHAETDEQDLFKDMTPVFQKPKKADLGSWEDGDDSGGWD 65
Query: 597 TEG 599
EG
Sbjct: 66 AEG 68
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 29.5 bits (63), Expect = 8.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 409 YYPVTNEIYIENGERFTVLTDRSQGGTSLVEGEVELMLH 447
Y+PV N+ +EN ERF V ++ G + +H
Sbjct: 3919 YFPVVNDQLVENTERFNVTLSTEDPRVTINPGYASIHIH 3957
Score = 29.5 bits (63), Expect = 8.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 409 YYPVTNEIYIENGERFTVLTDRSQGGTSLVEGEVELMLH 447
Y+PV N+ +EN ERF V ++ G + +H
Sbjct: 5153 YFPVVNDQLVENTERFNVTLSTEDPRVTINPGYASIHIH 5191
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,720,018
Number of Sequences: 59808
Number of extensions: 1000333
Number of successful extensions: 2067
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2033
Number of HSP's gapped (non-prelim): 36
length of query: 650
length of database: 16,821,457
effective HSP length: 87
effective length of query: 563
effective length of database: 11,618,161
effective search space: 6541024643
effective search space used: 6541024643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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