Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001695-TA|BGIBMGA001695-PA|IPR011682|Glycosyl hydrolases
38, C-terminal, IPR011013|Galactose mutarotase-like
(650 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 192 7e-49
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 71 3e-12
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 71 3e-12
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 45 2e-04
U39849-6|AAM81124.1| 642|Caenorhabditis elegans Hypothetical pr... 33 0.83
U39849-5|AAA81048.2| 663|Caenorhabditis elegans Hypothetical pr... 33 0.83
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 33 0.83
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 33 0.83
U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical pr... 32 1.5
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 30 4.4
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 30 4.4
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 30 4.4
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 30 4.4
Z92806-8|CAJ43452.1| 307|Caenorhabditis elegans Hypothetical pr... 29 7.8
AL021501-3|CAJ43442.1| 307|Caenorhabditis elegans Hypothetical ... 29 7.8
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 7.8
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ... 29 7.8
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 192 bits (468), Expect = 7e-49
Identities = 124/338 (36%), Positives = 187/338 (55%), Gaps = 23/338 (6%)
Query: 259 KGTMKKRETDDFKISFAYYPGCLGNNEVPANRSSGAYIFRPNSTKAIGLNVESVSEI-SG 317
K T KKR + F YY G ++ P SGAYIFRP + + I L + E+ G
Sbjct: 596 KATKKKRS---IRQEFFYYEGIDSKDDQP----SGAYIFRPKTQQPIALTSKLALEVVPG 648
Query: 318 DLLSEVRTKIRGNVLSIKRVYKEFDFIEHEWLVGPISVD--DGIGKEYVVKYQTDIINNG 375
+++EVR K+ V R+ + ++IE EW+VGPI + + I KE+V +Y T++ +
Sbjct: 649 AIINEVRQKVSPFVSQQIRLPRGKNYIEFEWIVGPIPKETKNPITKEFVTRYTTEVHSKN 708
Query: 376 EFYTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYYPVTNEIYI-ENGERFTVLTDRSQGG 434
+ +TDSNGRQ ++R + + + TEP+ GNYYP+T+ YI + +F+V+TDR+QG
Sbjct: 709 QSFTDSNGRQAMERFFDGATSFEYSDTEPIAGNYYPITSFGYIKDENAQFSVITDRAQGM 768
Query: 435 TSLVEGEVELMLHRRLLHDDAFGVGEALNETVL-GSGLVVRGKHRILRSKDPVEIAK--- 490
+ +G VE+MLHRR +DD FGV EAL+E G+GLV GKH +L + ++
Sbjct: 769 VA-SDGVVEIMLHRRCFYDDHFGVEEALDEPGKDGAGLVAMGKHIVLFTDVKASTSQLRP 827
Query: 491 -SVFQMHLPPVVFVSDASGLSYEQWMRLENCKKFVKTPMPDGLHLLTLEPWGDQ-ILLRI 548
++ H P + F + + + + +K +P G+HLLTLE W + L+R
Sbjct: 828 LAIDNFHQPVLAFNKNPEKFEFNRLLEYSG----LKFELPIGIHLLTLEKWHKKSSLIRF 883
Query: 549 ENYKTGAEDSTI-EIDLQGIFNGIHIKSVKETTLAANQ 585
EN G E ++I E D IF I S KE L AN+
Sbjct: 884 ENIYHGEEGNSIKEFDPTHIFTNFDIVSFKELLLGANR 921
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 1 MQHHDAITGTEKQHVAHDYERILSTAIDD 29
+QHHDA+TGT K++V DYE+ L+ + +
Sbjct: 409 VQHHDAVTGTAKENVTRDYEKQLAKGVSE 437
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 70.5 bits (165), Expect = 3e-12
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 282 GNNEVPANRSSGAYIFRPNSTKAIGLNVESVSEI--SGDLLSEVRTKIRGNVLSIKRVYK 339
GN + PA GAY+F P+ +A L +S I G+++ +V N L I + Y
Sbjct: 805 GNEDNPA----GAYLFLPDG-EARELKKQSSDWILVKGEVVQKVFAT-PNNDLKILQTYT 858
Query: 340 EFDFIEHEWLVGPISVDDGIGKEYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQWNL 399
+ + L + V E +++ + + + EF+TD NG QM+KR R Q L
Sbjct: 859 LYQGLPWIDLDNEVDVRSKENFELALRFSSSVNSGDEFFTDLNGMQMIKR----RRQTKL 914
Query: 400 TLTEPVPGNYYPVTNEIYIENG-ERFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGV 458
P N+YP++ +YIE+ R ++ + ++ G +SL G++E+ML RRL DD G+
Sbjct: 915 ----PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGL 970
Query: 459 GEALNE 464
+ + +
Sbjct: 971 QQGVRD 976
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAID 28
QHHD +TGT K HV DY + + A++
Sbjct: 575 QHHDGVTGTAKDHVVLDYGQKMIDALN 601
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 70.5 bits (165), Expect = 3e-12
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)
Query: 282 GNNEVPANRSSGAYIFRPNSTKAIGLNVESVSEI--SGDLLSEVRTKIRGNVLSIKRVYK 339
GN + PA GAY+F P+ +A L +S I G+++ +V N L I + Y
Sbjct: 803 GNEDNPA----GAYLFLPDG-EARELKKQSSDWILVKGEVVQKVFAT-PNNDLKILQTYT 856
Query: 340 EFDFIEHEWLVGPISVDDGIGKEYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQWNL 399
+ + L + V E +++ + + + EF+TD NG QM+KR R Q L
Sbjct: 857 LYQGLPWIDLDNEVDVRSKENFELALRFSSSVNSGDEFFTDLNGMQMIKR----RRQTKL 912
Query: 400 TLTEPVPGNYYPVTNEIYIENG-ERFTVLTDRSQGGTSLVEGEVELMLHRRLLHDDAFGV 458
P N+YP++ +YIE+ R ++ + ++ G +SL G++E+ML RRL DD G+
Sbjct: 913 ----PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGL 968
Query: 459 GEALNE 464
+ + +
Sbjct: 969 QQGVRD 974
Score = 33.9 bits (74), Expect = 0.36
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAID 28
QHHD +TGT K HV DY + + A++
Sbjct: 573 QHHDGVTGTAKDHVVLDYGQKMIDALN 599
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 44.8 bits (101), Expect = 2e-04
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 378 YTDSNGRQMLKRKLNARPQWNLTLTEPVPGNYYPVTNEIYIENG-ERFTVLTDRSQGGTS 436
YTDS G Q+L+R + L PV NYYP+ +++G +R +++++ G
Sbjct: 822 YTDSVGMQLLRRDF-----YKL----PVQSNYYPMPTAAVLQSGKQRLSIVSNVEHGARF 872
Query: 437 LVEGEVELMLHRRLLHDDAFGVG 459
L G VE+ + R L DD G+G
Sbjct: 873 LESGTVEINIDRILNQDDGKGLG 895
Score = 33.5 bits (73), Expect = 0.48
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 2 QHHDAITGTEKQHVAHDYERILSTAI 27
QHHDAITGT K V +Y +L +I
Sbjct: 524 QHHDAITGTSKVSVMDNYSELLHASI 549
>U39849-6|AAM81124.1| 642|Caenorhabditis elegans Hypothetical
protein C06A8.1b protein.
Length = 642
Score = 32.7 bits (71), Expect = 0.83
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 552 KTGAEDSTIEIDLQGIFNGIHI-KSVKETTLAANQWLDD-YDKWTWNTEGDFYESFNKKY 609
KT +E++T G+F G I + L+ W D+ Y W GDFY +K Y
Sbjct: 545 KTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQW-GDFYPKESKSY 603
Query: 610 GSFEAVN 616
G +AV+
Sbjct: 604 GVIKAVH 610
>U39849-5|AAA81048.2| 663|Caenorhabditis elegans Hypothetical
protein C06A8.1a protein.
Length = 663
Score = 32.7 bits (71), Expect = 0.83
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 552 KTGAEDSTIEIDLQGIFNGIHI-KSVKETTLAANQWLDD-YDKWTWNTEGDFYESFNKKY 609
KT +E++T G+F G I + L+ W D+ Y W GDFY +K Y
Sbjct: 566 KTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQW-GDFYPKESKSY 624
Query: 610 GSFEAVN 616
G +AV+
Sbjct: 625 GVIKAVH 631
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 32.7 bits (71), Expect = 0.83
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 139 EVYAPNGDKIVTQLVEIPDEVKRIPNRRSEATHELVFIAHLHPLGVKSFYVKRVSTTKRA 198
E + NG ++ Q+ + + +R P +A +LV L P V +F++ R ++A
Sbjct: 1072 EEHRTNGTELPKQMKLLHEAYQRCPLLDEDARRDLVEKTQLLPKWVTNFFINRSRKAQKA 1131
Query: 199 IANGSYLEWISGEGVRSDGYLD 220
N + DG+ D
Sbjct: 1132 AENAAEPSTSDATTTSDDGFFD 1153
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 32.7 bits (71), Expect = 0.83
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 139 EVYAPNGDKIVTQLVEIPDEVKRIPNRRSEATHELVFIAHLHPLGVKSFYVKRVSTTKRA 198
E + NG ++ Q+ + + +R P +A +LV L P V +F++ R ++A
Sbjct: 1070 EEHRTNGTELPKQMKLLHEAYQRCPLLDEDARRDLVEKTQLLPKWVTNFFINRSRKAQKA 1129
Query: 199 IANGSYLEWISGEGVRSDGYLD 220
N + DG+ D
Sbjct: 1130 AENAAEPSTSDATTTSDDGFFD 1151
>U23510-6|AAC46784.2| 236|Caenorhabditis elegans Hypothetical
protein R12C12.5 protein.
Length = 236
Score = 31.9 bits (69), Expect = 1.5
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 517 LENCKKFVKTPMPDGLHLLTLEPWGDQILLRIENYKTGAEDSTIEIDLQGIFNGIHIKSV 576
+E+ KK++KT L L + +Q L RI+ T E ++ G+ N + I +
Sbjct: 65 VESAKKYMKTNKKMALAALRKKKHYEQELSRIDGVLTKLEAQRTALENVGMHNEV-IDVL 123
Query: 577 KETTLAANQWLDDYDKWTWNTEGDFYESFNKKYGSFEAVNKAVDGP--DVREDEGLKIKL 634
+TT + ++ K + D + E +N+A+ P DV +++ L +L
Sbjct: 124 GKTTETLKK---EHAKMDIDKVHDLMDEIADGLAMSEELNEAISAPIGDVADEDELMQEL 180
Query: 635 KAKEIRSFIADIEYT 649
+E++ +AD+ T
Sbjct: 181 --QELQDNVADLSTT 193
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ D G+E
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEE 446
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ D G+E
Sbjct: 399 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEE 445
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ D G+E
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEE 446
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 200 ANGSYLEWISGEGVRSDGYLDRLNQIADV-KDLTNLGLDAIVDEGKE 245
A +++ W GEG+ + + +A + KD +G+D++ D G+E
Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEE 446
>Z92806-8|CAJ43452.1| 307|Caenorhabditis elegans Hypothetical
protein Y61B8A.4 protein.
Length = 307
Score = 29.5 bits (63), Expect = 7.8
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 473 VRGKHRILRSKDPVEIAKSVFQMHLPPVVFVSDASGLSYEQWMRLENCKKFVKT 526
V GK R ++ D V+ + + VF DA + Y W+ +N FV T
Sbjct: 88 VLGKRRKMKKGDSVDFVLNDLSNLMKDKVFKLDALKIEYPTWIYKDNLDVFVST 141
>AL021501-3|CAJ43442.1| 307|Caenorhabditis elegans Hypothetical
protein Y61B8A.4 protein.
Length = 307
Score = 29.5 bits (63), Expect = 7.8
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 473 VRGKHRILRSKDPVEIAKSVFQMHLPPVVFVSDASGLSYEQWMRLENCKKFVKT 526
V GK R ++ D V+ + + VF DA + Y W+ +N FV T
Sbjct: 88 VLGKRRKMKKGDSVDFVLNDLSNLMKDKVFKLDALKIEYPTWIYKDNLDVFVST 141
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 588 DDYDKWTWNTEGDFYESFNKKYGSFEAVNKAVDGPDVR 625
DD+ + WN + + +S N+ G + VN+ V PD R
Sbjct: 337 DDFTLFMWNPK-ETKQSINRMTGHMQLVNQVVFSPDTR 373
>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
protein F40E12.2 protein.
Length = 1251
Score = 29.5 bits (63), Expect = 7.8
Identities = 10/40 (25%), Positives = 25/40 (62%)
Query: 136 GHYEVYAPNGDKIVTQLVEIPDEVKRIPNRRSEATHELVF 175
G + Y+ + D ++ ++ +PDE+K+I N + + E+++
Sbjct: 572 GQIKKYSADLDLLIKKIPSVPDEIKKIKNPKVKTDLEMIW 611
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,730,623
Number of Sequences: 27539
Number of extensions: 756814
Number of successful extensions: 1694
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1665
Number of HSP's gapped (non-prelim): 24
length of query: 650
length of database: 12,573,161
effective HSP length: 86
effective length of query: 564
effective length of database: 10,204,807
effective search space: 5755511148
effective search space used: 5755511148
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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