GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001695-TA|BGIBMGA001695-PA|IPR011682|Glycosyl hydrolases
38, C-terminal, IPR011013|Galactose mutarotase-like
         (650 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    26   1.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           26   1.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   1.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   2.6  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 362 EYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQW 397
           E  +K+  D+ ++  F TD      ++ K+N +P W
Sbjct: 402 ETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVW 437


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 362 EYVVKYQTDIINNGEFYTDSNGRQMLKRKLNARPQW 397
           E  +K+  D+ ++  F TD      ++ K+N +P W
Sbjct: 402 ETTLKHLIDVASDRFFITDGEKAARMQAKVNRQPVW 437


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 71  NESRCHTSETSETFMRLRGSESGSVVGRISTKRLDAAYKPAVLQVT 116
           N +   TSE S TF  L+ S   ++  R  T R    Y P V + T
Sbjct: 469 NATVIQTSELSATFKGLKPSTDYAIQVRAKTTRGWGEYTPVVYKKT 514


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 167 SEATHELVFIAHLHPLGVKSFYVKRVSTTKRAIANGSYLEWISG 210
           S      +FIA L+     S + + +      + NGS   W+SG
Sbjct: 308 STVPFNFMFIADLNNQSTASDFKQLIDRWVANVPNGSVTNWVSG 351


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.135    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,131
Number of Sequences: 429
Number of extensions: 8714
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 6
length of query: 650
length of database: 140,377
effective HSP length: 62
effective length of query: 588
effective length of database: 113,779
effective search space: 66902052
effective search space used: 66902052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)