Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001694-TA|BGIBMGA001694-PA|undefined
(595 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 43 1e-04
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 35 0.037
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 35 0.037
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 31 0.34
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 0.34
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 30 0.79
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 30 1.0
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 30 1.0
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 1.4
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.8
SPCC132.02 |hst2||Sir2 family histone deacetylase Hst2|Schizosac... 29 1.8
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 1.8
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 29 1.8
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 29 2.4
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 2.4
SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr 1... 29 2.4
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 28 3.2
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 4.2
SPBC725.02 |mpr1|spy1|response regulator phosphotransferase |Sch... 28 4.2
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 4.2
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 27 5.6
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 27 5.6
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 27 5.6
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 27 7.4
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 27 7.4
SPAC6G9.13c |bqt1|mug23, rec26|bouquet formation protein Bqt1|Sc... 27 7.4
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 7.4
SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyce... 27 7.4
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 27 9.7
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 9.7
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 27 9.7
SPBC1198.13c |tfg2|SPBC660.03c|transcription factor TFIIF comple... 27 9.7
SPAC17C9.13c |cut8||tethering factor for nuclear proteasome Cut8... 27 9.7
SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyce... 27 9.7
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 9.7
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 27 9.7
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 42.7 bits (96), Expect = 1e-04
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 42 ALKETTAADHGNIITKKGSHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNND 101
A KE ++ K S + S+ E K+ ++K K KK S + ++++
Sbjct: 36 AAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSE 95
Query: 102 DDGSNAENTPKHKLLDCKSAEVFSFRLKRFNFDSSFDLPDSPTDSSSRTEEIVEIXXXXX 161
+ S++E+ + S+E S + + + +S ++SSS +E E
Sbjct: 96 SESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEE------ 149
Query: 162 XXXXXXXXEKKEVKMCRKVEQEP-DTDSESTSVSPEPFEDLEDKNEEER 209
EKKE E +++SES+S E E++ +K EE++
Sbjct: 150 EEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKK 198
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 34.7 bits (76), Expect = 0.037
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 359 INLFGTESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGN 418
+N S+ +L S H+ DS E + P S L QS + N
Sbjct: 1 MNASNNISKFPDLDNSSKLIDHILDSDDSEELD----ELPDISSLVPSARAQSRKQYLKN 56
Query: 419 FTMDSNTLSAYSESLDMIVSYNSFDDSTLSILQQKTAIERITFYVQAHSIQINCEADEFE 478
DS+ S Y ++D++ S + DDS ++K A++ + Y + Q E DE
Sbjct: 57 ---DSSNSSTYRWNIDLLSSTATIDDSVAK--RRKLAVQNLLQYDSTQTFQTGDEIDELI 111
Query: 479 SKNI 482
K++
Sbjct: 112 GKSV 115
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 34.7 bits (76), Expect = 0.037
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 360 NLFGTESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNF 419
++F T +E + SV +A ++ S +S S +G S ++ S TSS+
Sbjct: 490 SIFSTATEATDTSVQTSSA--IYDSSSTSNIQSSSSVYASSTGALSSNSLSSSTSSVSTS 547
Query: 420 TMDSNTLSAYSESLDMIVSYNSFDDSTLS 448
+ + + S Y+ S + + S NS ST S
Sbjct: 548 YIPNASSSVYASSTEAL-SSNSLSSSTSS 575
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 385 SDSSECNCKCHYSPSDSGLTSKDTNQS-ITSSIGNFTMDSNTLSAYS---ESLDMIVS 438
S SS + S S TS T+ S + SSI +MDS+ +S+YS SL I+S
Sbjct: 342 SSSSSASATATSSAESSIATSPITSSSNVVSSISTSSMDSSAVSSYSVVQSSLASIIS 399
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 31.5 bits (68), Expect = 0.34
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 26/152 (17%)
Query: 58 KGSHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNNDDDGSNAENTPKHKLLD 117
KG SD+D S + ++ ++ +L KK Q + S + ++ ++ S++E+ + +
Sbjct: 6 KGGSSDSDAESVDSSEENRLTSSRL--KK--QDDSSSEEESSEEESASSSESESSEEESE 61
Query: 118 CKSAEVFSFRLKRFNFDSSFDLPDSPTDSSSRTEEIVEIXXXXXXXXXXXXXEKKEVKMC 177
+ +EV + K DS +DS S EE E+ E +
Sbjct: 62 SEESEVEVPKKKAVAASE-----DSESDSESSEEE-----------------EETESEED 99
Query: 178 RKVEQEPDTDSESTSVSPEPFEDLEDKNEEER 209
+V E +++SES S S E E E+ +E ER
Sbjct: 100 SEVSDESESESESESESEEESESEEESDESER 131
Score = 29.1 bits (62), Expect = 1.8
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 91 MTRSLDFTNNDDDGSNAENTPKHKLLDCKSAEVFSFRLKRFNFDSSFDLPDSPTDSSSRT 150
M+R ++D D + +++ +++L S RLK+ + DSS + S +S+S +
Sbjct: 1 MSRFFKGGSSDSDAESVDSSEENRLT--------SSRLKKQD-DSSSEEESSEEESASSS 51
Query: 151 EEIVEIXXXXXXXXXXXXXEKKEVKMCRKVEQEPDTDSESTSVSPEPFEDLEDKNEEE 208
E E+ EV++ +K DSES S S E E+ E + + E
Sbjct: 52 ES--------ESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSE 101
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 366 SEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMDSNT 425
S K+ S S + S SDSS+ + SDS +S D++ S +S GN D+ T
Sbjct: 266 SSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTT 325
Score = 29.1 bits (62), Expect = 1.8
Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 6/190 (3%)
Query: 18 TNEDRAKGSLTSRRRHNTQAEPDGALKETTAADHGNIITKKGSHSDTDILSANEQKKRKI 77
++E GS +S ++ +E + + ++ ++ + + S D+D S++ + +
Sbjct: 99 SSEASGSGS-SSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 157
Query: 78 RKLKLDVKKASQSMTRSLDFTNNDDDGSNAENTPKHKLLDCKSAEVFSFRLKRFNFDSSF 137
D +S S +ND S++++ + D S+ S +SS
Sbjct: 158 SSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSS----DSESESSS 213
Query: 138 DLPDSPTDSSSRTEEIVEIXXXXXXXXXXXXXEKKEVKMCRKVEQEPDTDSESTSVSPEP 197
+ DS + SSS E E + D++SES+S +
Sbjct: 214 EGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSS-EDSDSSSSSSDSESESSSKDSDS 272
Query: 198 FEDLEDKNEE 207
+ D ++
Sbjct: 273 SSNSSDSEDD 282
Score = 28.7 bits (61), Expect = 2.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 363 GTESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMD 422
G EK S +G ESDSS + +DS +S D+ +S D
Sbjct: 90 GAPPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSE------D 143
Query: 423 SNTLSAYSESLDMIVSYNSFDDSTLSILQQKTAIE 457
S++ S+ S+S S S S+ S + +++ E
Sbjct: 144 SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE 178
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 364 TESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMDS 423
+ES E+ + S ++ SES S + + S S+S +SKD++ S SS S
Sbjct: 227 SESSSED-NDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSS 285
Query: 424 NTLSAYSES 432
++ + SES
Sbjct: 286 DSSDSESES 294
Score = 27.1 bits (57), Expect = 7.4
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 364 TESEKE-ELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMD 422
+ESE E S S ++ SES S + + S S+S +S+D++ S +SS D
Sbjct: 207 SESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSS------D 260
Query: 423 SNTLSAYSESLDMIVSYNSFDDST 446
S + S+ +S S +S DDS+
Sbjct: 261 SESESSSKDSDSSSNSSDSEDDSS 284
Score = 26.6 bits (56), Expect = 9.7
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 364 TESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIG---NFT 420
+ES E+ S S ++ SES S + S S+S +S+D + S +SS + +
Sbjct: 137 SESSSED-SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSS 195
Query: 421 MDSNTLSAYSESLDMIVSYNSFDDSTLSILQQKTAIE 457
DS++ S+ S+S S S S+ S + +++ E
Sbjct: 196 EDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE 232
Score = 26.6 bits (56), Expect = 9.7
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 364 TESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMDS 423
+ES E+ S S ++ SES S + S S+S +S+D + S +SS S
Sbjct: 191 SESSSED-SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSS 249
Query: 424 NTLSAYSESLDMIVSYNSFDDSTLS 448
+ S S D +S D + S
Sbjct: 250 EDSDSSSSSSDSESESSSKDSDSSS 274
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 30.3 bits (65), Expect = 0.79
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 85 KKASQSMTRSLDFTNNDDDGSNAENTPKHKLLDCKSAEVFSFRLKRFNFDSSFDLPDSPT 144
K++ + R D + D G++A N+P + + +LK NF ++ +P +P
Sbjct: 687 KRSPKKRVRFDDSMSTSDSGASAYNSP-----------IQTSKLKNMNFFNTMHMPSTPA 735
Query: 145 DSSSRTEEIVEIXXXXXXXXXXXXXEKKEVKMCRK--VEQEPDTDSESTSVSPEPFED 200
+ +++ +K E + K +E++ + +SEST + ED
Sbjct: 736 HKRPENKNQIDVEINLTSPVSPMLEDKPEPGLLIKSPLEKKQEVNSESTQLDQLLAED 793
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/72 (22%), Positives = 31/72 (43%)
Query: 468 IQINCEADEFESKNILTFHCPACNISEVDEECLLKHILSQKHCEKIHFLYKTAYIKKCVA 527
+ I + +E + K +C CN E H+ S+KH + + + + IKK +
Sbjct: 53 LSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSKFQRNSRIKKLQS 112
Query: 528 SGKEIMPSTVLN 539
+ S+ L+
Sbjct: 113 EDASSIASSTLS 124
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 29.9 bits (64), Expect = 1.0
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 374 SMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMDSNT-LSAYSES 432
S+ N+ FS+S S N + SG++++++++ ++SS G T NT S++ S
Sbjct: 205 SLSNSQERFSKSPSDGQNVRSRAKKIPSGMSAEESDELLSSS-GRKTRSFNTPFSSFFAS 263
Query: 433 LDMIV-SYNSFDDSTLSILQQKTAI 456
L+ SY + LS +Q A+
Sbjct: 264 LEETPGSYTAHLGGVLSPREQTPAL 288
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.5 bits (63), Expect = 1.4
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 364 TESEKEELSVSMHNAGHLFSESDSSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMDS 423
+ S S S ++ S S SS + S S S +S ++ ITSS T S
Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSS----TSSS 217
Query: 424 NTLSAYSESLDMIVSYNSFDDSTLSILQQKTAIERITFYVQAHSIQINCE 473
++ S+ S S S S S ++ + T I +T + S + E
Sbjct: 218 HSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSE 267
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 71 EQKKRKIRKLK-LDVKKASQSMTRSLDFTNNDDDGSNAENTPKHKLLDCKSAEVFSFRLK 129
E++ +RK K K AS+S + + ++ DD+ SN+ NT H ++A +L+
Sbjct: 953 EERANLLRKAKDPSPKSASESSSFYQNGSDIDDNDSNSSNTSNH---TTENANAQQRKLE 1009
Query: 130 RFNFDSSFDLPDSPTDSSS 148
N L PT++SS
Sbjct: 1010 DLNRSFEDFLGSRPTNNSS 1028
>SPCC132.02 |hst2||Sir2 family histone deacetylase
Hst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 501 LKHILSQKHCEKIHFLYKTAYIKK-CVASGKEI 532
+KH+ S KH EK+ L K +KK CV G I
Sbjct: 6 VKHVDSSKHLEKVASLIKEGKVKKICVMVGAGI 38
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 75 RKIRKLKLDVKKASQSMTRSLDFTNNDDDGSNAENT 110
R++++ + + KK + S+ S + +NND D S E+T
Sbjct: 158 RRLKQKRFETKKNNFSVKESSNLSNNDSDASLDEDT 193
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 425 TLSAYSESLDMIVSYNSFDDSTLSILQQKTAIERI 459
TL Y E +D++VS+N +S L Q T + RI
Sbjct: 812 TLDVYGELIDVVVSHNGQYESQLDRRLQSTELARI 846
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 181 EQEPDTDSESTSVSPEPFEDLEDKNEEERISLLLN 215
E+E + ++TSV E E+L+++NE+ER+ +N
Sbjct: 46 EEENEDADQNTSVESES-EELDNENEDERVQKSVN 79
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 2.4
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 36 QAEPDGALKETTAADH-GNIITK-KGSHSDTDILSANEQKKRKIRKLKLDVKKASQSMTR 93
QA+ D LK+T D+ N+ T G H+D D+ +A +K+R + + ++++ Q +
Sbjct: 50 QAKYD-LLKDTNMTDYVANLWTNLHGGHTDEDMANAFAEKRRSVLQELSELEEEVQGILG 108
Query: 94 SLDFTN-----NDDDGSNAENTPKH-KLLDCKSAEVFSFRLKRFN 132
L+ + D G N ++ +H + + A ++ F ++N
Sbjct: 109 VLENPDLIAALRQDKGQNLQHLQEHYNITPERIAVLYKFAQFQYN 153
>SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 386
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 181 EQEPDTDSESTSVSPEPFEDLEDKNEEE 208
E+E D + E+ S SPEP E+K ++E
Sbjct: 349 EEEEDEEEEAESQSPEPETSEEEKEDKE 376
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 28.3 bits (60), Expect = 3.2
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 57 KKGSHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNNDDDG---SNAENTPKH 113
+K S D LS +E+K+ +K K K+ S+S S D ++DD S+A N K
Sbjct: 922 QKASEDDMS-LSDDEEKQSGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKTKK 980
Query: 114 KLLDCKSAEVFSFRLKRFNFDSSFDLPDSPTDSSSRTEE 152
+ + + V S + + FD D + + SRT E
Sbjct: 981 RRV---NRRVIS---EEYTFDQDSDAEGNQEEEVSRTIE 1013
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 202 EDKNEEERISL-LLNYQMRLEKLECFLQKLLNEFQFHIEVSKIFNAKSIVTAPSGTDVTR 260
E K E E + L L+N LE ++ +KL NE IE K + TD+++
Sbjct: 511 EHKKEVEALQLQLVNSSTELESVKSENEKLKNELVLEIEKRKKYETNEAKITTVATDLSQ 570
>SPBC725.02 |mpr1|spy1|response regulator phosphotransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 87 ASQSMTRSLDFTNN-DDDGSNAENTPKHKLLDCKSAEVFSFRLKRFNFDSSFD 138
A + ++D +N+ DD +NA+N P + A V S L +D SF+
Sbjct: 104 APEGTEETVDISNSISDDHANAKNLPAASVKALVGAGVLSDELSVIAYDMSFE 156
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 61 HSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNNDDDGSNAENTPKHKLLD 117
HSDT+ LS + ++R+L S + ++ + G NA+ +P + D
Sbjct: 82 HSDTNFLSNFDSAYERVRRLLNQQGGKSSLQKKEVEQIETQEGGDNAKGSPSSENKD 138
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 187 DSESTSVSPEPFEDLEDKNEEERISLLLN 215
DS+S+S + F+D ED++EEE L N
Sbjct: 25 DSQSSSKPKKRFDDEEDEDEEENKESLQN 53
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 467 SIQINCEADEFESKNILTFHCPACNISEVDEECLLKHILSQKHCEKIHFLYK----TAYI 522
SI+ + + + KN+ C + +S V+ LLK+++++ K L K T+
Sbjct: 241 SIEFSYDMKQIYRKNLKIIGCNSLLLSLVESNSLLKNMVAKFEAGKYKVLNKKIAETSLT 300
Query: 523 KKCVASGKEIM 533
+C+ S +++M
Sbjct: 301 DECINSYRKLM 311
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 27.5 bits (58), Expect = 5.6
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 47 TAADHGNIITKKGSHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNNDDDGSN 106
+ A+ N+ + + +S N+Q + + +L ++ A+Q +L T+++ D
Sbjct: 493 STAEVSNVRNDESKANSLSEISYNQQSECRSSELNVNEDSANQKEESALG-TSDNSDMYE 551
Query: 107 AENTPKH 113
ENTP H
Sbjct: 552 KENTPIH 558
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 27.1 bits (57), Expect = 7.4
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 408 TNQSITSSIGNFTMDSNTLSAYSESLDMIVSYNSFDDSTLSILQQKTAIERITFYVQ--A 465
T +S+ + FT+ + S YS + ++++ Y D TLS L++K I R+ F +
Sbjct: 881 TPRSVIRNPSKFTLQNAIPSTYSHNQNVVMFYEVL-DITLSELERKQLI-RVHFLSNGIS 938
Query: 466 HSIQINCEADE 476
H Q+ D+
Sbjct: 939 HETQMEFYVDK 949
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 27.1 bits (57), Expect = 7.4
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 410 QSITSSIGNFTMDSNTLSAYSESLDMIVSYNSFDDSTLSILQQKTAIERITFYVQAHSIQ 469
QS + +G ++DSNTL D++ + + IL+++ + I+ A
Sbjct: 468 QSTAAGLGPVSLDSNTLENVDVG-DLVEGHLQYRWLVAKILKERLGYDNIS---DAEIQS 523
Query: 470 INCEADEFESKNILTFHCPACNISEVDEECL 500
+ + +++ESK T++ E+++E L
Sbjct: 524 LAVQEEKYESKQ-RTYYSQKEQEEEIEQEVL 553
>SPAC6G9.13c |bqt1|mug23, rec26|bouquet formation protein
Bqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 132
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 488 PACNISEVDEECLLKHILSQKHCEKIHFLY 517
P C S + LKH L Q E+I +LY
Sbjct: 29 PVCTDSNCEHARFLKHSLIQVSIERIEYLY 58
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 354 LREAMINLFGTESEKEELSVSMHNAGHLFSESDSSE-CNCKCHYSPSDSGLTSKDTNQSI 412
++ I L E+ + LS +HN H +E D E N YS SD +KD
Sbjct: 547 VKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGP 606
Query: 413 TSSIGN 418
++G+
Sbjct: 607 LRNLGD 612
>SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 470 INCEADEFESKNIL-TFHCPACNISEVDEECLLKHILSQKH 509
I+ D + KN L TF C C + +E L H +KH
Sbjct: 38 IDLSKDPYLMKNHLGTFECRLCLTTHANENSYLTHTQGKKH 78
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 19 NEDRAKGSLTSRRRHNTQAEPDGALKETTAADHGNIITKKGSHSDTDILSANEQKKRKIR 78
NED + ++ +R+ + + + D GN ++ +D L + ++ KIR
Sbjct: 285 NEDNTQKPISKKRKSKKASHKYLSSRTAPNVDFGNFAKERHRENDVSELYSKTKRTSKIR 344
Query: 79 KLKLDV 84
+L ++
Sbjct: 345 ELYKEI 350
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 277 GVSPSWNIIVEKEDSSSKNKLKQQLLAMKETIDTFINLYLDHRRKGLTVLRK 328
G++P ++E+E S +++ + + + D + +LY ++ RK LRK
Sbjct: 302 GINPELLPVIEEEIRSFRDQSAMKKREKQRSKDEYASLYKEYTRKEQEKLRK 353
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 354 LREAMINLFGTESEKEELSVSMHNAGHLFSESDSSE 389
+ ++I+LFG+E+ KE+L N F S+S E
Sbjct: 503 IENSLIDLFGSENNKEKLG-KQENVRFAFLNSESLE 537
>SPBC1198.13c |tfg2|SPBC660.03c|transcription factor TFIIF complex
beta subunit Tfg2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 26.6 bits (56), Expect = 9.7
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 38 EPDGALKETTAADHGNIITKKGSHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDF 97
+P+ LKE D I+ K+G ++ L + ++L ++ASQS + S+D
Sbjct: 221 QPEVYLKEVL--DSIAILNKRGPYALKYSLKPEYKGTMDAASVELRNQQASQSESSSIDH 278
Query: 98 TNN----DDDGSNAE 108
T D+ G+NAE
Sbjct: 279 TGKNTSPDNPGTNAE 293
>SPAC17C9.13c |cut8||tethering factor for nuclear proteasome
Cut8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 197 PFEDLEDKNE--EERISLLLNYQMRLEKLECFLQKLLNEFQ 235
P E+LE+ N+ + R+ LNY +L+K E + + + FQ
Sbjct: 190 PLEELEEHNKTSQNRMEEALNYLKQLQKNEPLVHERSHTFQ 230
>SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 851
Score = 26.6 bits (56), Expect = 9.7
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 387 SSECNCKCHYSPSDSGLTSKDTNQSITSSIGNFTMDSNTLSAYSESLDMIVSYNSFDD-- 444
S + N K HY + SG+ ++ T + I S+ TL +DM + Y+ +
Sbjct: 58 SKDGNTKAHYLLAGSGINAEQTWKKI-ESLSLQVRPPTTLELSFTDVDMFLKYHREKNVL 116
Query: 445 STLSILQQKTAI 456
++L L Q T I
Sbjct: 117 NSLEALVQNTQI 128
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 9.7
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 397 SPSDSGLTSKDTNQSITSSIGNFTMDSNTLSAYSESLDMIVSYNSFDDSTLSIL 450
S S S T + + TSS+ + S++ S+++ S + + +SF STLSIL
Sbjct: 742 SSSSSSYTPASSTSTTTSSVSS--RQSSSSSSFTPSSAISTAKSSFVLSTLSIL 793
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 39 PDGALKETTAADHGNIITKKGSHSDTDILSANEQKKRKIRKL 80
P + + T H N+ KK S +D S+ +K K RKL
Sbjct: 1111 PVSSFAKQTTNKHANLKQKKTHSSKSDKKSSRRRKNEKRRKL 1152
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.129 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,672,639
Number of Sequences: 5004
Number of extensions: 115055
Number of successful extensions: 514
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 464
Number of HSP's gapped (non-prelim): 63
length of query: 595
length of database: 2,362,478
effective HSP length: 77
effective length of query: 518
effective length of database: 1,977,170
effective search space: 1024174060
effective search space used: 1024174060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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