GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001694-TA|BGIBMGA001694-PA|undefined
         (595 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           29   0.46 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   4.3  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           24   9.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 28.7 bits (61), Expect = 0.46
 Identities = 17/61 (27%), Positives = 29/61 (47%)

Query: 60  SHSDTDILSANEQKKRKIRKLKLDVKKASQSMTRSLDFTNNDDDGSNAENTPKHKLLDCK 119
           S  D D  S    +KRK    K +     +S  ++ D T N++D +  +  P+ KL++  
Sbjct: 506 SDIDDDCRSPRLDRKRKTGTKKRNPSSNDRSPNQNSDSTENNEDLAYLDTLPEVKLVEVT 565

Query: 120 S 120
           S
Sbjct: 566 S 566


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 25.4 bits (53), Expect = 4.3
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 385 SDSSECNCKCHYSPSDSGL---TSKDTNQSITSSIGNFTMDSNTLSAYSESLDMIVSYNS 441
           +DS E + K   + SD+ L   +S ++N  +TS I    +D N+L     +   ++  N+
Sbjct: 240 TDSIEKSAKPTTNTSDAQLELTSSSESNDLVTSIIDTALVDDNSLQETDTTTIPVIPPNA 299

Query: 442 FDDSTLSILQQKTAIERITF 461
            D      L  + + E  ++
Sbjct: 300 ADPPPTPALTAQFSPESFSY 319


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 560 CTLCFENLIVGESVLMAHCYDKNHVNRKETLSELFE 595
           C  C E+ +    + + HCYD + V   +  S   E
Sbjct: 140 CYCCRESFLRERQLQLTHCYDPDGVRMTDHESATME 175


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.129    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,747
Number of Sequences: 2123
Number of extensions: 22945
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 3
length of query: 595
length of database: 516,269
effective HSP length: 68
effective length of query: 527
effective length of database: 371,905
effective search space: 195993935
effective search space used: 195993935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)