GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001693-TA|BGIBMGA001693-PA|IPR001810|Cyclin-like F-box,
IPR013101|Leucine-rich repeat 2, IPR001611|Leucine-rich repeat,
IPR006553|Leucine-rich repeat, cysteine-containing subtype
         (417 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.1  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 191 GKILDRKPVIVRLASSELETLDRLLENCP 219
           G I+  + V+++   S LET+   +++CP
Sbjct: 363 GAIVSYELVLMQFNDSLLETISEQIDSCP 391


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 191 GKILDRKPVIVRLASSELETLDRLLENCP 219
           G I+  + V+++   S LET+   +++CP
Sbjct: 398 GAIVSYELVLMQFNDSLLETISEQIDSCP 426


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 191 GKILDRKPVIVRLASSELETLDRLLENCP 219
           G I+  + V+++   S LET+   +++CP
Sbjct: 398 GAIVSYELVLMQFNDSLLETISEQIDSCP 426


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,985
Number of Sequences: 317
Number of extensions: 2824
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 417
length of database: 114,650
effective HSP length: 58
effective length of query: 359
effective length of database: 96,264
effective search space: 34558776
effective search space used: 34558776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)