GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001693-TA|BGIBMGA001693-PA|IPR001810|Cyclin-like F-box,
IPR013101|Leucine-rich repeat 2, IPR001611|Leucine-rich repeat,
IPR006553|Leucine-rich repeat, cysteine-containing subtype
         (417 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            31   0.058
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   1.3  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    25   5.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    25   5.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    25   5.1  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   5.1  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   8.8  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 31.1 bits (67), Expect = 0.058
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 201 VRLASS--ELETLDR-LLENCPGLKKLSLESVNVADTTCAILGRCTNLETLNM 250
           V+LAS   ELETL   LL+  P L ++SLE V +      +L    NL  LN+
Sbjct: 307 VKLASQRVELETLPHDLLQMLPALDQVSLERVGLVSLPGTLLFGSANLTQLNL 359


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 249  NMTMAQGITAEGSRALLEGCVNLQSLNISWCNLSEAALQVLVDMLPRRLQRLNLGGARIM 308
            ++ +  GI A      +   +   SLN    N +   +   +    RRL RL LG  +  
Sbjct: 974  SVDLESGILAASGSESMANFMRKGSLNFQTRNRATEGIGRSIQKAKRRLNRLGLGKGKKK 1033

Query: 309  TDELTERLCARCPRLAELDLSDCSR 333
            T    +   +   R + LD+SD  R
Sbjct: 1034 TGGTEDVGGSYFSRRSSLDVSDGPR 1058


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 230 NVADTTCAILGRCTNLETLNMTMAQGITAEGSRA 263
           +V DT    +GR     TL +  A  +TAEG ++
Sbjct: 309 DVFDTVLFAIGRQAETGTLKLANAGVVTAEGGKS 342


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 230 NVADTTCAILGRCTNLETLNMTMAQGITAEGSRA 263
           +V DT    +GR     TL +  A  +TAEG ++
Sbjct: 285 DVFDTVLFAIGRQAETGTLKLANAGVVTAEGGKS 318


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 230 NVADTTCAILGRCTNLETLNMTMAQGITAEGSRA 263
           +V DT    +GR     TL +  A  +TAEG ++
Sbjct: 282 DVFDTVLFAIGRQAETGTLKLANAGVVTAEGGKS 315


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 24.6 bits (51), Expect = 5.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 302 LGGARIMTDELTERLCARCPRLAELDLSDCS 332
           L G RI+ D++  R C R     E D+++ +
Sbjct: 644 LEGRRILVDDIRVRGCGRASLFTEPDIAEAT 674


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 302 LGGARIMTDELTERLCARCPRLAELDLSDCS 332
           L G RI+ D++  R C R     E D ++ +
Sbjct: 600 LEGRRILVDDIRVRGCGRASLFTEPDFAEAT 630


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,201
Number of Sequences: 2123
Number of extensions: 13750
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 8
length of query: 417
length of database: 516,269
effective HSP length: 66
effective length of query: 351
effective length of database: 376,151
effective search space: 132029001
effective search space used: 132029001
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)