GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001692-TA|BGIBMGA001692-PA|IPR002048|Calcium-binding
EF-hand, IPR011511|Variant SH3, IPR001452|Src homology-3,
IPR000108|Neutrophil cytosol factor 2, IPR000261|EPS15 homology (EH),
IPR010989|t-snare
         (1304 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.049
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    28   1.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    28   1.8  
AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    27   4.3  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    26   7.4  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   9.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   9.8  
AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione S-tran...    25   9.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 33.1 bits (72), Expect = 0.049
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 6/103 (5%)

Query: 131 SPTQPSNQSLLGDFGS-GQPLIQPLVQPVKP-PVSTVPDLISGVKPLSQSLLDS--PPMA 186
           +P  P    ++   G+ G P      QP  P P    P       P+   +     P M 
Sbjct: 182 NPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQ 241

Query: 187 PTVQPLIGTVQPLIGPDPLMGSVQPLIGSQPLAGPTPLVSSPQ 229
           P +QP   + Q +  P P+MG   P+    P+ GP P + SPQ
Sbjct: 242 PGMQPRPPSAQGMQRP-PMMGQPPPIRPPNPMGGPRPQI-SPQ 282



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 21/81 (25%), Positives = 32/81 (39%)

Query: 209 VQPLIGSQPLAGPTPLVSSPQTLVNSSPLVSSQPIMSSQPLISASTISAQPLGTMQPLIG 268
           V  ++G   L  P+ + S  Q    +    S  P  S  P++ +S ++A P    QP   
Sbjct: 53  VPTVLGGPNLFAPSAVSSQLQRPQPTVLAASPAPQPSLAPVVPSSVVTAPPARPSQPPTT 112

Query: 269 TAPPIMGATQALIQSPPLSGP 289
              P   A    + S PL  P
Sbjct: 113 RFAPEPRAEVKFVPSVPLKTP 133


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 645 ELEALRSEEQSKVLSLKAKCQSLSAQLGAESVRCSTLAASIRDTRTAVAAD----KRTID 700
           ELE   + E  K  ++ A+  ++   +G E  +   L  SIRD   A+A      +R  +
Sbjct: 298 ELEQQLAVESKKEATVAAERNTMKDSIGQEQRKLKNLQKSIRDDEQALAGKEVEMQRRGE 357

Query: 701 GMRSDRDSSMAEMQQLKARVKELNAKQIALN 731
             ++ +D+  A+ Q      K   A    L+
Sbjct: 358 SFQALKDACEADEQAFAKAQKRFEAVSAGLS 388


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 14/65 (21%), Positives = 33/65 (50%)

Query: 635 QLEWEKKRTRELEALRSEEQSKVLSLKAKCQSLSAQLGAESVRCSTLAASIRDTRTAVAA 694
           Q+  E+KR  EL+ +  + + ++   +AK +SL+ Q      + +   A+++D    +  
Sbjct: 405 QIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDETKVLLE 464

Query: 695 DKRTI 699
           +K  +
Sbjct: 465 EKEKL 469


>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 408 LDADGKLGCEEFVLAMYLCEKATQGEPVPARLPPELI 444
           LD +G +  E   + +YL  K  QGE   A  P E++
Sbjct: 58  LDDNGTIISESHAIMIYLVRKYGQGEGKDALYPTEIV 94


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 279 ALIQSPPLSGPQQPAPVTAASFGGXXXXXXXXXXXXGQPVTSTPIAALNKEVISKPGSVV 338
           +L+    ++ P  P  V  ++ G               P++S          +S PG + 
Sbjct: 165 SLLPFHQMNEPNMPHNVNYSNTGFNNSHMGGGGGGPNSPISSHMGPNSPMSSVSSPGPIS 224

Query: 339 TSPEVPMGVM--SPPP 352
           ++P+ P G +  +PPP
Sbjct: 225 SNPQSPYGALPETPPP 240


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 139 SLLGDFGSGQPLIQPLVQPVKPPVST-VPDLISG-VKPLSQSLLDSP--PMAPTVQPL-- 192
           +L G FG+G            P   T +P   +G V+P+     + P  P      P   
Sbjct: 489 NLFGQFGTGFSNAATQPNASVPMFETNLPGPSNGWVQPVPSHTQNGPSQPQPQQQNPFNL 548

Query: 193 --IGTVQPLIGPDPLMGSVQPLIGSQPLAGPTPLVSS---PQTLVNSSPLVSSQPIMSSQ 247
              GT+ PL   DPLM        +QP  GP  L S       L N  P+ +S  + S  
Sbjct: 549 LNFGTL-PLATGDPLMAMSTANTNNQPNVGPPSLGSDFYMNLDLANLDPVFNSSELRSVL 607

Query: 248 PLISASTIS 256
             +S + ++
Sbjct: 608 GSLSTTDLN 616


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 187  PTVQPLIGTVQPLIGPDPLMGSVQPLIG-SQPLAGP--TPLVSSPQTL-VNSSPLVSSQP 242
            P    LIG    +  P+ LMGS Q + G +Q   GP   P  ++P  +  +    +  QP
Sbjct: 1233 PGYMDLIGVPASVDNPEYLMGSTQAIAGLAQGSMGPHTPPPPNTPNGMPTHQHSQIQLQP 1292

Query: 243  IMSSQPL 249
            I   QPL
Sbjct: 1293 I--QQPL 1297


>AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 408 LDADGKLGCEEFVLAMYLCEKATQGEPVPARLPPELI 444
           LD +G +  E   + +YL  K  QGE   A  P +++
Sbjct: 58  LDDNGTIISESHAIMIYLVRKYGQGEGKDALYPTDIV 94


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,128,535
Number of Sequences: 2123
Number of extensions: 41047
Number of successful extensions: 93
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 84
Number of HSP's gapped (non-prelim): 12
length of query: 1304
length of database: 516,269
effective HSP length: 72
effective length of query: 1232
effective length of database: 363,413
effective search space: 447724816
effective search space used: 447724816
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)