Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001690-TA|BGIBMGA001690-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(468 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 41 2e-05
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 41 2e-05
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 33 0.006
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 30 0.030
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 29 0.053
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 28 0.12
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 27 0.21
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 6.1
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 6.1
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 182 KWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACS--KTFQCPLCNKEYA 239
K +A L H K C CNK F + HV S K F+CP+C++ ++
Sbjct: 1 KSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFS 60
Query: 240 SRDRYTVHLLRKH 252
T H +R H
Sbjct: 61 QSSSVTTH-MRTH 72
Score = 32.7 bits (71), Expect = 0.006
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 181 SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACS--KTFQCPLCNKEY 238
+K F++ L H K C C++ F + H+ S + ++C LC K +
Sbjct: 28 NKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAF 87
Query: 239 ASRDRYTVHL 248
+ T HL
Sbjct: 88 SDSSTLTKHL 97
Score = 25.4 bits (53), Expect = 0.86
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 134 LDCNERYIKKRDLLTHLNRKHNYSKDF---AVELQYYCSYETCT----------YSMKFG 180
+DCN+ + + +L H+ R H+ K F + ++ S T Y +
Sbjct: 25 IDCNKSFSQAANLTAHV-RTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLC 83
Query: 181 SKWFAERKFLNQHYNKVHS-IKVIECERCNKGFPSETDYARHV 222
K F++ L +H ++HS K EC+ C F + RH+
Sbjct: 84 KKAFSDSSTLTKHL-RIHSGEKPYECKLCLLRFSQSGNLNRHM 125
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 182 KWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACS--KTFQCPLCNKEYA 239
K +A L H K C CNK F + HV S K F+CP+C++ ++
Sbjct: 257 KSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFS 316
Query: 240 SRDRYTVHLLRKH 252
T H +R H
Sbjct: 317 QSSSVTTH-MRTH 328
Score = 32.7 bits (71), Expect = 0.006
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 181 SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACS--KTFQCPLCNKEY 238
+K F++ L H K C C++ F + H+ S + ++C LC K +
Sbjct: 284 NKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAF 343
Query: 239 ASRDRYTVHL 248
+ T HL
Sbjct: 344 SDSSTLTKHL 353
Score = 25.4 bits (53), Expect = 0.86
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 134 LDCNERYIKKRDLLTHLNRKHNYSKDF---AVELQYYCSYETCT----------YSMKFG 180
+DCN+ + + +L H+ R H+ K F + ++ S T Y +
Sbjct: 281 IDCNKSFSQAANLTAHV-RTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLC 339
Query: 181 SKWFAERKFLNQHYNKVHS-IKVIECERCNKGFPSETDYARHV 222
K F++ L +H ++HS K EC+ C F + RH+
Sbjct: 340 KKAFSDSSTLTKHL-RIHSGEKPYECKLCLLRFSQSGNLNRHM 381
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.006
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 208 CNKGFPSETDYARHVPACS--KTFQCPLCNKEYASRDRYTVHL 248
C K F + RH+ + K F CP+CNK + D H+
Sbjct: 352 CGKRFTRSDELQRHLRTHTGEKRFACPICNKRFMRSDHLAKHV 394
Score = 24.6 bits (51), Expect = 1.5
Identities = 14/44 (31%), Positives = 16/44 (36%)
Query: 179 FGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHV 222
F K F L +H K C CNK F A+HV
Sbjct: 351 FCGKRFTRSDELQRHLRTHTGEKRFACPICNKRFMRSDHLAKHV 394
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 30.3 bits (65), Expect = 0.030
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 188 KFLNQHYNKVHS-IKVIECERCNKGFPSETDYARH--VPACSKTFQCPLCNKEYASRDRY 244
K + Q++ + H+ K EC+ C+K F + H + + ++C C++++
Sbjct: 147 KHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQ---- 202
Query: 245 TVHLLRKHPQIH 256
V LR+H ++H
Sbjct: 203 -VANLRRHLRVH 213
Score = 29.5 bits (63), Expect = 0.053
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 187 RKFLNQHYNKVH-----SIKVIECERCNKGFPSETDYARH--VPACSKTFQCPLCNKEYA 239
++F H+ K H + CE C++ F + RH V + + C C+ +++
Sbjct: 170 KRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFS 229
Query: 240 SRDRYTVHLL 249
++ H+L
Sbjct: 230 DSNQLKAHVL 239
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 29.5 bits (63), Expect = 0.053
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 190 LNQHYNKVHSIKVIECERCNKGFPSETDYARHV------PACSKTFQCPLCNKEYASRDR 243
L HY + +C+ C + F ++ + H+ P QCP+C+K++ +
Sbjct: 150 LQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTN--- 206
Query: 244 YTVHLLRKHPQIH 256
+L++H ++H
Sbjct: 207 --ALVLQQHIRLH 217
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 28.3 bits (60), Expect = 0.12
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 399 TCLCLYE-TSKSGGRYQDGLSSSPCSN 424
TC C Y T K G Y D S++PC N
Sbjct: 84 TCHCPYGYTGKDCGEYVDWCSTNPCEN 110
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 27.5 bits (58), Expect = 0.21
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 201 KVIECERCNKGFPSETDYARH--VPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIH 256
K EC+ C+K F + H + + ++C C++++ V LR+H ++H
Sbjct: 8 KPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQ-----VANLRRHLRVH 60
Score = 23.0 bits (47), Expect = 4.6
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Query: 187 RKFLNQHYNKVH-----SIKVIECERCNKGFPSETDYARH--VPACSKTFQCPLCN 235
++F H+ K H + CE C++ F + RH V + + C C+
Sbjct: 17 KRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCS 72
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 6.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 119 LLAPDRLAKVYITCPLD 135
+L DRL K Y+ C LD
Sbjct: 34 ILKSDRLLKNYVNCLLD 50
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 6.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 119 LLAPDRLAKVYITCPLD 135
+L DRL K Y+ C LD
Sbjct: 34 ILKSDRLLKNYVNCLLD 50
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.317 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,822
Number of Sequences: 317
Number of extensions: 4311
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 17
length of query: 468
length of database: 114,650
effective HSP length: 59
effective length of query: 409
effective length of database: 95,947
effective search space: 39242323
effective search space used: 39242323
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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