Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001690-TA|BGIBMGA001690-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(468 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 40 6e-04
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 38 0.002
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 34 0.049
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 33 0.085
SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces p... 31 0.34
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 31 0.46
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.80
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 29 1.1
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 29 1.4
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 28 2.4
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 28 3.2
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 27 4.2
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 27 5.6
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 5.6
SPBC2G5.06c |hmt2|cad1|sulfide-quinone oxidoreductase|Schizosacc... 27 7.4
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 27 7.4
SPCC70.06 |||nuclear export factor|Schizosaccharomyces pombe|chr... 27 7.4
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 26 9.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.8
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 26 9.8
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 9.8
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 9.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 40.3 bits (90), Expect = 6e-04
Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 22/122 (18%)
Query: 135 DCNERYIKKRDLLTHLNRKHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERKFLNQHY 194
DC R+ K+ L H+NR H + Y C +E+C G + F + L H
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKI------ISYSCPHESCV-----GHEGFEKWSQLQNHI 198
Query: 195 NKVHSIKVIECERCNKGFPSETDYARHVPACS------KTFQCPL--CNKEYASRDRYTV 246
+ H V C C + F + HV KT+ CP+ C K +
Sbjct: 199 REAH---VPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKK 255
Query: 247 HL 248
H+
Sbjct: 256 HI 257
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 166 YYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARH--VP 223
Y C++ C +K F L H N + + +C C K F + D RH +
Sbjct: 570 YVCTFAGC-------NKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Query: 224 ACSKTFQCPLCNKEYASRDRYTVH 247
K F C CN+ +A D H
Sbjct: 623 TGIKAFACVTCNQRFARMDALNRH 646
Score = 27.9 bits (59), Expect = 3.2
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 16/93 (17%)
Query: 129 YITCPLDCNERYIKKRDLLTHLNRKHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERK 188
Y+ CN+R+ + +L +H+N NY + CS C K FA +
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYR-------PFQCS--IC-------KKSFARQH 613
Query: 189 FLNQHYNKVHSIKVIECERCNKGFPSETDYARH 221
+H IK C CN+ F RH
Sbjct: 614 DKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 33.9 bits (74), Expect = 0.049
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 165 QYYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHV 222
++YC+Y C S F ++ L +H ++K C CN+ F RHV
Sbjct: 25 RFYCTYPDCPKS-------FTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 208 CNKGFPSETDYARHVPACS--KTFQCPLCNKEYASRDRYTVHLLRKHPQ 254
C K F + RH K F C CN+ +A D H+ + H Q
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQ 81
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.1 bits (72), Expect = 0.085
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 197 VHSIKVIECERCNKGFPSETDYARHVPACSKT--FQCPLCNKEYASRDRYTVHLLRKH 252
+ S +V C++C K F + RH SK CP C + +D H+ R H
Sbjct: 25 IDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPCC11E10.08 |rik1||silencing protein Rik1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1040
Score = 31.1 bits (67), Expect = 0.34
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 354 FCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSPDLSIKETQTCLCLYETSK-SGGR 412
F SETV+ + + F +E S S KE + + + ++ T T LC+Y+++K S
Sbjct: 409 FPSETVAFNI--KEDFQLELDPSLSTKERTIALSGTNGEFVQVTSTFLCIYDSAKRSRLV 466
Query: 413 YQDGLSSSPCSNNFISTETQTGDLKCCVKSDVLLSFNSTETQ-TCFDDDTQ 462
Y + ++++ C + S G K D ++ E++ +C D Q
Sbjct: 467 YIEKITNAACYQEY-SAIVINGTALAIFKKDTEVARKVFESEISCLDFSAQ 516
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 210 KGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIHKEFKMNNKAE 266
KG PS DY P TF +++ + + Y + +LRK I K N KAE
Sbjct: 556 KGTPSIQDYEIIKPISKGTFGTVYLSRKNTTGEIYAIKVLRKVDMISKNQVANVKAE 612
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 208 CNKGFPSETDYARHVPAC--SKTFQCPLCNKEYASRDRYTVHLLRKH 252
C K F + RH + SK F CP C+ + D H+ +KH
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 163 ELQYYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHV 222
+++Y C ++ CT S F ++ +H+ + K C C+ F RHV
Sbjct: 14 DIRYKCDFQGCTKS-------FTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 331 ISTQTVFEDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSP 390
+ST+ +FE +S TS DE I CS D T + +F S S T SE +P
Sbjct: 545 LSTEDLFESFSVAESVTSTDEDI-CSTNFIQQDF-TMEYNHDF-FSSSKTPTNISEQSNP 601
Query: 391 D 391
D
Sbjct: 602 D 602
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/83 (20%), Positives = 33/83 (39%)
Query: 316 SVPGRSDGLEIKTDEISTQTVFEDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGL 375
S P RS L+ + S + + + + S S+T + + + TFP
Sbjct: 172 SKPNRSPPLKPEDPFASFNSSASAIAAASKSAAASASALSSDTGRSATMNSTTFPTAMKS 231
Query: 376 SRSNKETVTSETQSPDLSIKETQ 398
+ K T+++ SP + + Q
Sbjct: 232 QSTTKPTLSNSVSSPSIQVSNNQ 254
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 344 KSQTSEDESIFCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSPDLSIKETQTCLCL 403
K S DE+I + + L +QT + IE + K+ + D +KE Q
Sbjct: 179 KEGLSRDETIHLAVSSLLEVVQTASGNIELAIMDPGKDVEFLHSDKIDTIVKEIQDEKEA 238
Query: 404 YETSKSGGRYQDGLSSS 420
K GR G+S++
Sbjct: 239 EAARKKSGRSAPGVSTT 255
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.9 bits (59), Expect = 3.2
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 148 THLNRKHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECER 207
+HL + ++ EL S F + F+ +H HS+ + E E
Sbjct: 181 SHLFTQEPTPEEIEAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREY 240
Query: 208 CNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLLRK 251
PS DY S F C CN+E+ S + H+ +K
Sbjct: 241 LVDE-PSLFDYLAE--KISIGFTCLTCNREFKSLEAVRAHMQQK 281
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 418 SSSPCSNNFISTETQTGDLKCCVKSDVLLSFNSTETQTCFDDDTQGSD 465
S+S + N + T+ +GD + SD FNS E++ D +G D
Sbjct: 52 SNSSRAANDMGTDIGSGDPYAGMTSDTKKGFNSVESRKKEQSDVRGGD 99
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 285 EDYICDSPKRSSATQTRLDDKIKNDVTLPSWSVPGRSDGLEIKTDE 330
+D +C +PK+S+ R D++LP ++V + D L+ T E
Sbjct: 373 QDLVCVTPKQSTKESERFISSHVEDLSLPCFAV--KEDSLKRITQE 416
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.1 bits (57), Expect = 5.6
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 226 SKTFQCPLCNKEYASRD 242
SK + CP CNK+++S D
Sbjct: 133 SKGYVCPFCNKKFSSLD 149
>SPBC2G5.06c |hmt2|cad1|sulfide-quinone
oxidoreductase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 243 RYTVHLLRKHPQIHKEFKMNNKAE 266
RY+ LLR++ Q+H+ K+N K E
Sbjct: 244 RYSDALLRQNEQLHRNVKINYKDE 267
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.6 bits (56), Expect = 7.4
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 338 EDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQ-SPDLSIKE 396
++L+SI + SE+E++ S+ +++ I LSR++ T E Q S L E
Sbjct: 107 KNLISISKKLSENENLPVSKIAEVTNELDTLVRINDQLSRNHISGTTEEMQSSSSLIAGE 166
Query: 397 TQTCLCLYETSKSGGRYQDGLSSSPCSN 424
Q + + K G+ +D L P ++
Sbjct: 167 VQPGISFRDQLKV-GKLEDTLYLGPTTS 193
>SPCC70.06 |||nuclear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 458
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 337 FEDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSPDLSIK 395
F+DL+ I + TSEDE + C + L P L+R K +T S ++S +
Sbjct: 361 FKDLMKILAATSEDELVQCCKMHGLKIEYIGEQPSAVVLNR--KTVITEPLLSSEISCR 417
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 339 DLLSIKSQTSEDESIFCSETVSLSDIQTQTFP 370
++L K+ SE+E F +SL DI++ FP
Sbjct: 310 NILIRKADRSEEEVSFLLNEISLDDIESVDFP 341
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 9.8
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Query: 332 STQTVFEDLLSIKSQTSEDESIFCSETVSLSDIQT-QTFPIEFGLSRSNKETVTSETQSP 390
++ T+ S S TS +I S + S S T + + S S+ T +S T S
Sbjct: 286 TSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISS 345
Query: 391 DLSIKETQTCLCLYETSKSGGRYQDGLSSSPCSNNFISTETQTGDLKCCVKSDVLLSFNS 450
S + + +SKS + +SSS +++ T + + + S S +S
Sbjct: 346 SSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSS 405
Query: 451 TETQT 455
++ +
Sbjct: 406 HKSSS 410
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 356 SETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSPDLSIKETQTCLCLYETSKSGGRYQD 415
S+ +S ++ T+ F I GLS + V S SP ++ E + L E S + ++
Sbjct: 148 SKNLSSENMATEIFEINSGLSAQSGTEVGSSQSSPSVNESEPKATEDLDELSPGSYKVKE 207
Query: 416 GLSSSP 421
SP
Sbjct: 208 IHIRSP 213
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.2 bits (55), Expect = 9.8
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 295 SSATQTRLDDKIKNDVTLPSWSVPGRSDGLEIKTDEISTQTVFEDLLS-IKSQTSEDESI 353
+ +T T + + + S + SD E D I++ ++ +++ + S T+ +
Sbjct: 173 TGSTDTSVSSTLTYHTPIASPTTSSNSDN-EYTVDVITSSSLSSFVITNVDSTTTSVINY 231
Query: 354 FCSETVSLSDIQTQTFPIEFGLSRSNKETVTSETQSPDLSIKETQTCLCLYETS-KSGGR 412
+ T+ S + P E + T + TQ+ D S + T + L +S S G
Sbjct: 232 IGASTLESSSLTNTVSPTESTFYETKSSTSSVPTQTIDSSSFTSSTPVSLTSSSTSSSGS 291
Query: 413 YQDG--LSSSP 421
QD + S+P
Sbjct: 292 SQDSTTIDSTP 302
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 186 ERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYT 245
++ + NQ+ K H + C P+ + V +K ++C +C+K Y + +
Sbjct: 358 DKAYKNQNGLKYHKLHG-HCSPITTPTPAPIPHQGFVVE-NKPYRCEVCSKRYKNLNGLK 415
Query: 246 VHLLRKHPQI 255
H H Q+
Sbjct: 416 YHRTHSHLQV 425
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,061,181
Number of Sequences: 5004
Number of extensions: 85300
Number of successful extensions: 273
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 255
Number of HSP's gapped (non-prelim): 28
length of query: 468
length of database: 2,362,478
effective HSP length: 75
effective length of query: 393
effective length of database: 1,987,178
effective search space: 780960954
effective search space used: 780960954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -