Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001690-TA|BGIBMGA001690-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 49 7e-06
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 47 4e-05
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 47 4e-05
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 45 1e-04
09_04_0564 + 18565583-18566449,18569662-18570123 45 1e-04
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 45 1e-04
08_02_1172 + 24898290-24899141,24900864-24901328 44 3e-04
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 44 3e-04
09_02_0366 + 7941550-7942161,7942230-7942775 42 0.001
06_03_0743 + 24069752-24070483,24071890-24072345 42 0.001
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 42 0.001
01_01_0990 + 7847066-7847478,7847713-7848679 42 0.001
01_05_0421 + 21990034-21990392,21991691-21992681 41 0.002
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 41 0.002
01_06_1412 - 37140654-37141088,37141549-37142214 40 0.003
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 40 0.003
05_05_0022 + 21592403-21593083,21593720-21594208 40 0.006
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 39 0.007
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 38 0.023
09_02_0226 - 6007656-6008063,6012166-6012678 36 0.052
03_06_0607 + 35037467-35038624 36 0.052
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 35 0.12
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 34 0.21
01_06_1495 + 37769982-37771496 34 0.21
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 33 0.37
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 33 0.49
08_02_1602 - 28148255-28149413,28151927-28152087 33 0.64
02_04_0316 - 21978330-21979397 32 1.1
11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009 31 2.0
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 31 2.0
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 31 2.6
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 31 2.6
07_03_1165 - 24459156-24460139 31 2.6
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 30 3.4
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 30 3.4
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 30 4.5
12_01_0513 + 4059586-4059620,4060155-4060365,4060470-4060724,406... 29 6.0
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 29 7.9
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 49.2 bits (112), Expect = 7e-06
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 131 TCPLD-CNERYIKKRDLLTHLNRKHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERKF 189
TC +D C ++ K ++ H+ H Q+ C E C K+ SK +K
Sbjct: 118 TCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKM---KKH 174
Query: 190 LNQHYNKVHSIKVIECE-RCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHL 248
H K+ ++V+ CE C K F + H AC + QC +C +++ ++
Sbjct: 175 EESHV-KLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKN------ 227
Query: 249 LRKHPQIHKE 258
+++H + H+E
Sbjct: 228 IKRHLRAHEE 237
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 46.8 bits (106), Expect = 4e-05
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 117 VILLAPDRL-AKVYITCPLDCNERYIKKRDLLTHLNRKHNYS----KDFAVELQ---YYC 168
VI L+P L A C + CN+ + + ++L H R HN + E++ Y C
Sbjct: 34 VIALSPKTLLATNRFVCEI-CNKGFQRDQNLQLH-RRGHNLPWKLRQRSGKEVRKRVYVC 91
Query: 169 SYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC-SK 227
TC + S+ + + +H+ + H K +C++C+K + ++D+ H C S+
Sbjct: 92 PEPTCVHHDP--SRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSR 149
Query: 228 TFQCPLCNKEYASRDRYTVH 247
++C C ++ RD + H
Sbjct: 150 EYRCD-CGTLFSRRDSFITH 168
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 46.8 bits (106), Expect = 4e-05
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 117 VILLAPDRLAKV--YITCPLDCNERYIKKRDLLTHLNRKHNY-------SKDFAVELQYY 167
V+ L+P L YI C + C++ + + ++L H R HN S A + Y
Sbjct: 52 VVALSPKTLLATNRYI-CEV-CHKGFQRDQNLQLH-RRGHNLPWKLKQRSSTEAKKKVYV 108
Query: 168 CSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC-S 226
C TC + ++ + + +HY++ H K +C+RC+K + ++D+ H C +
Sbjct: 109 CPEITCPHHD--ATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTKICGT 166
Query: 227 KTFQCPLCNKEYASRDRYTVH 247
K ++C C ++ +D + H
Sbjct: 167 KEYRCD-CGTIFSRKDSFITH 186
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 44.8 bits (101), Expect = 1e-04
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 117 VILLAPDRL-AKVYITCPLDCNERYIKKRDLLTHLNRKHNY-------SKDFAVELQYYC 168
VI L+P L A C + CN+ + ++++L H R HN + A Y C
Sbjct: 34 VIALSPRTLMATNRFVCEV-CNKGFQREQNLQLH-RRGHNLPWKLKQKNPKEARRRVYLC 91
Query: 169 SYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC-SK 227
+C + S+ + + +HY + H K C++C+K + ++D+ H C ++
Sbjct: 92 PEPSCVHHDP--SRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSKTCGTR 149
Query: 228 TFQCPLCNKEYASRDRYTVH 247
++C C ++ RD + H
Sbjct: 150 EYRCD-CGTLFSRRDSFITH 168
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 162 VELQYYCSYETCTYSMKFG-SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYAR 220
+ L YC C ++ +K + + L HY + H +K C +C K F + D+
Sbjct: 315 LRLPCYCCAAGCRNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRT 374
Query: 221 HVPACSKTFQCPLCNKEY 238
H C K + C LC E+
Sbjct: 375 HEKNCGKLWYC-LCGSEF 391
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 44.8 bits (101), Expect = 1e-04
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 89 MNWIKTTTSDSSVPQNITRHILTENKLTVILLAPDRL-AKVYITCPLDCNERYIKKRDLL 147
M + + D + + +R ++ VI L+P L A C + CN+ + ++++L
Sbjct: 1 MGIVPYISQDKTKSVHFSRFHASDPDAEVIALSPKTLLATNRFVCEV-CNKGFQREQNLQ 59
Query: 148 THLNRKHNY-----SKDFAVELQ---YYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHS 199
H R HN K+ A + Y C TC + ++ + + +H+ + H
Sbjct: 60 LH-RRGHNLPWKLKQKNPAQAQRRRVYLCPEPTCVHHDP--ARALGDLTGIKKHFCRKHG 116
Query: 200 IKVIECERCNKGFPSETDYARHVPAC-SKTFQCPLCNKEYASRDRYTVH 247
K +C++C+K + ++D+ H C ++ ++C C ++ RD + H
Sbjct: 117 EKKWKCDKCSKRYAVQSDWKAHSKICGTREYRCD-CGTLFSRRDSFITH 164
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 43.6 bits (98), Expect = 3e-04
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 162 VELQYYCSYETCTYSMKFG-SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYAR 220
+ L YC C ++ ++ + + L HY + H +K C +C K F + D+
Sbjct: 310 LRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRT 369
Query: 221 HVPACSKTFQCPLCNKEY 238
H C K + C LC E+
Sbjct: 370 HEKNCGKLWYC-LCGSEF 386
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 43.6 bits (98), Expect = 3e-04
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 132 CPLD-CNERYIKKRDLLTHLNRKHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERKFL 190
CP++ CN ++ K ++ H+ H + ++ C E C + K+ SK +K
Sbjct: 318 CPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKL---QKHE 374
Query: 191 NQHYNKVHSIKVIECE-RCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLL 249
H K+ +VI CE C K F + H +C + C +C + ++
Sbjct: 375 ESHV-KLDYSEVICCEPGCMKAFTNLECLKAHNKSCHRHVVCDVCGTKQLKKN------F 427
Query: 250 RKHPQIHK 257
++H ++H+
Sbjct: 428 KRHQRMHE 435
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 162 VELQYYCSYETCTYSMKFG-SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYAR 220
+ L YC E C +++ ++ + + L HY + H + C RC K F D+
Sbjct: 237 MRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCGKRFAVRGDWRT 296
Query: 221 HVPACSKTFQCPLCNKEYASRDRYTVHL 248
H C K + C +C ++ + H+
Sbjct: 297 HEKNCGKLWFC-VCGSDFKHKRSLKDHV 323
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 162 VELQYYCSYETCTYSMKFG-SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYAR 220
+ L YC C ++ ++ + + L HY + H IK C +C K F D+
Sbjct: 270 LRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 329
Query: 221 HVPACSKTFQCPLCNKEYASRDRYTVHL 248
H C K + C C ++ + H+
Sbjct: 330 HEKNCGKLWYC-ACGSDFKHKRSLKDHI 356
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 166 YYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC 225
Y C +C + S+ + + +H+ + H K +C+RC K + +D+ H C
Sbjct: 129 YVCPEASCVHHSP--SRALGDLTGIKKHFCRKHGEKKWKCDRCGKRYAVHSDWKAHSKVC 186
Query: 226 -SKTFQCPLCNKEYASRDRYTVH 247
++ ++C C ++ RD + H
Sbjct: 187 GTREYKCD-CGTVFSRRDSFVTH 208
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 166 YYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC 225
Y C ++C + S+ + + +H+ + H K +C++C+K + ++D+ H C
Sbjct: 66 YVCPEKSCVHHNP--SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC 123
Query: 226 -SKTFQCPLCNKEYASRDRYTVH 247
++ ++C C ++ RD + H
Sbjct: 124 GTREYRCD-CGTLFSRRDSFITH 145
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 153 KHNYSKDFAVELQYYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGF 212
K SK+ + Y C +C + S+ + + +H+ + H K +C++C+K +
Sbjct: 35 KQRGSKEAVRKKVYICPEASCVHHDP--SRALGDLTGIKKHFFRKHGEKKWKCDKCSKKY 92
Query: 213 PSETDYARHVPAC-SKTFQCPLCNKEYASRDRYTVH 247
+D+ H C ++ ++C C ++ RD + H
Sbjct: 93 AVHSDWKAHSKICGTREYKCD-CGTIFSRRDSFITH 127
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 166 YYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC 225
Y C TC + ++ + + +H+++ H K CERC K + +D+ HV C
Sbjct: 89 YVCPEPTCVHHDP--ARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVKNC 146
Query: 226 -SKTFQCPLCNKEYASRDRYTVH 247
++ ++C C ++ +D H
Sbjct: 147 GTREYRCD-CGILFSRKDSLLTH 168
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 162 VELQYYCSYETCTYSMKFG-SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYAR 220
++L YC C ++ ++ + + L HY + H K C RC K F + D+
Sbjct: 248 LKLPCYCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCAKPFAVKGDWRT 307
Query: 221 HVPACSKTFQCPLCNKEYASRDRYTVHL 248
H C K + C C ++ + H+
Sbjct: 308 HEKNCGKRWFC-ACGSDFKHKRSLNDHV 334
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 117 VILLAPDRL-AKVYITCPLDCNERYIKKRDLLTHLNRKHNYS--------KDFAVELQYY 167
VI L+P L A C + C + + + ++L H R HN K+ + Y
Sbjct: 60 VIALSPRTLMATNRYVCEI-CGKGFQRDQNLQLH-RRGHNLPWKLKQRNPKEVVRKKVYV 117
Query: 168 CSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC-S 226
C C + ++ + + +H+++ H K +C++C+K + +D+ H C +
Sbjct: 118 CPEAGCVHHDP--ARALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKVCGT 175
Query: 227 KTFQCPLCNKEYASRDRYTVH 247
+ ++C C ++ RD + H
Sbjct: 176 REYRCD-CGTLFSRRDSFITH 195
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 39.5 bits (88), Expect = 0.006
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 162 VELQYYCSYETCTYSMKFG-SKWFAERKFLNQHYNKVHSIKVIECERCNKGFPSETDYAR 220
++L YC C ++ ++ + + L HY + H K C RC K F + D+
Sbjct: 256 LKLPCYCCAAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCAKPFAVKGDWRT 315
Query: 221 HVPACSKTFQCPLCNKEYASRDRYTVHL 248
H C K + C C ++ + H+
Sbjct: 316 HEKNCGKRWFC-ACGSDFKHKRSLNDHV 342
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 39.1 bits (87), Expect = 0.007
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 100 SVPQNITRHILTENKLTVILLAPDRL-AKVYITCPLDCNERYIKKRDLLTHLNRKHNY-- 156
+ P + L + VI L+P L A C + CN+ + ++++L H R HN
Sbjct: 64 AAPPAKKKRTLPDPDAEVIALSPKTLLATNRFVCEV-CNKGFQREQNLQLH-RRGHNLPW 121
Query: 157 --SKDFAVELQ----YYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECERCNK 210
+ ++ Q Y C TC + S+ + + +H+ + H K +C++C+K
Sbjct: 122 KLKQKNPLQAQRRRVYLCPEPTCVHHDP--SRALGDLTGIKKHFCRKHGEKKWKCDKCSK 179
Query: 211 GFPSETDYARHVPAC-SKTFQC 231
+ ++D+ H C ++ ++C
Sbjct: 180 RYAVQSDWKAHSKICGTREYRC 201
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 37.5 bits (83), Expect = 0.023
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 190 LNQHYNKVHSIKVIECERCNKGFPSETDYARHVPAC-SKTFQCPLCNKEYASRDRYTVH 247
+ +H+ + H K C+RC K + + D H C ++ ++C C + RD + H
Sbjct: 124 IKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKTCGTREYRCD-CGTLFTRRDSFVTH 181
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 36.3 bits (80), Expect = 0.052
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 190 LNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLL 249
L HY + H K C +C K D+ H C + + C C ++ + H +
Sbjct: 226 LQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRRWHC-ACGSDFKHKRSLKDH-I 283
Query: 250 RKHPQIHKE 258
R + H+E
Sbjct: 284 RAFGRDHRE 292
>03_06_0607 + 35037467-35038624
Length = 385
Score = 36.3 bits (80), Expect = 0.052
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 159 DFAVELQYY-CSYETCTYSMKFGS-KWFAERKFLNQHYNKVHSIKVIECERCN-KGFPSE 215
D A ++Y C Y C + + S + + HY + H K C RCN K F
Sbjct: 211 DAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVV 270
Query: 216 TDYARHVPACSKTFQCPLCNKEYASRDRYTVHL 248
D H C + C ++ +D+ H+
Sbjct: 271 ADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHV 303
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 35.1 bits (77), Expect = 0.12
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 190 LNQHYNKVHSIKVIECERCNKGFPSETDYARHVPACSKTFQC 231
L HY + H + C RC K F D+ H C + ++C
Sbjct: 235 LQTHYRRRHGARDFACRRCAKRFAVRGDWRTHEKNCGRLWRC 276
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 196 KVHSIKVIECERCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQI 255
K ++ + C C++ F E +H A K F+C +C+K+ ++ +H+L Q+
Sbjct: 4 KKKRVEKVFCYYCDREFDDEKILVQHQKA--KHFKCHVCHKKLSTAGGMAIHVL----QV 57
Query: 256 HKE 258
HKE
Sbjct: 58 HKE 60
>01_06_1495 + 37769982-37771496
Length = 504
Score = 34.3 bits (75), Expect = 0.21
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 157 SKDFAVE----LQYYCSYETCTYSMKFGSKWFAERKFL---NQHYNKVHSIKVIECERCN 209
SKD ++E +Y C Y C + + K F K + HY + H K C RCN
Sbjct: 300 SKDSSLESAPVTRYSCPYVGCKRNKEH--KKFQPLKTILCVKNHYKRSHCDKSYTCSRCN 357
Query: 210 -KGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHL 248
K F D H C + C ++ +D+ H+
Sbjct: 358 TKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHV 397
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 33.5 bits (73), Expect = 0.37
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 117 VILLAPDRLAKV--YITCPLDCNERYIKKRDLLTHLNRKHNY--------SKDFAVELQY 166
V+ L+P L + Y+ C + CN+ + + ++L H R+H + + A + +
Sbjct: 51 VVSLSPRTLLESDRYV-CEI-CNQGFQRDQNLQMH-RRRHKVPWKLLKREAGEAARKRVF 107
Query: 167 YCSYETCTYSMKFGSKWFAERKFLNQHYNKVHS-IKVIECERCNKGFPSETDYARHVPAC 225
C TC + S + + +H+ + HS + C RC+K + +DY H+ C
Sbjct: 108 VCPEPTCLHHDP--SHALGDLVGIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKTC 165
Query: 226 SKTFQCPLCNKEYASRDRYTVH 247
C + ++ + + H
Sbjct: 166 GTRGHTCDCGRVFSRVESFIEH 187
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 33.1 bits (72), Expect = 0.49
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 117 VILLAPDRLAKV--YITCPLDCNERYIKKRDLLTHLNRKHNY--------SKDFAVELQY 166
V+ L+P L + Y+ C + CN+ + + ++L H R+H + + A + +
Sbjct: 52 VVSLSPRTLLESDRYV-CEI-CNQGFQRDQNLQMH-RRRHKVPWKLLKREAGEAARKRVF 108
Query: 167 YCSYETCTYSMKFGSKWFAERKFLNQHYNKVHS-IKVIECERCNKGFPSETDYARHVPAC 225
C TC + S + + +H+ + HS + C RC+K + +DY H+ C
Sbjct: 109 VCPEPTCLHHDP--SHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTC 166
Query: 226 SKTFQCPLCNKEYASRDRYTVH 247
C + ++ + + H
Sbjct: 167 GTRGHSCDCGRVFSRVESFIEH 188
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 32.7 bits (71), Expect = 0.64
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Query: 161 AVELQYYCSYETCTYSMKFGSKWFAERKFL--NQHYNKVHSIKVIECERC-NKGFPSETD 217
A +Y C E C ++ + +K+ + + HY + H K+ C RC K F +D
Sbjct: 307 AAARKYSCPQEGCRWNRRH-AKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVLSD 365
Query: 218 YARHVPACSKTFQCPLCNKEYASRDRYTVHL 248
H C C ++ +D+ H+
Sbjct: 366 LRTHEKHCGDHRWLCSCGTSFSRKDKLIGHV 396
>02_04_0316 - 21978330-21979397
Length = 355
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 163 ELQYYCSYETCTYSMKFGS-KWFAERKFLNQHYNKVHSIKVIECERC--NKGFPSETDYA 219
E+++ C Y C + + H+ + H K+ CERC K F D
Sbjct: 189 EVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLR 248
Query: 220 RHVPACSKTFQ--CPLCNKEYASRDRYTVHL 248
H+ C + Q C C ++ +D+ HL
Sbjct: 249 SHLRHCGEEAQWRCS-CGTTFSRKDKLFGHL 278
>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
Length = 431
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 119 LLAPDRLAKVYITCPLDCNERYIKKRDLLTHLNRKHNYSK 158
+L P LA V +CP DC+E ++K L H + +H S+
Sbjct: 183 VLDPRTLAAVVFSCP-DCDEVFVKPDSLELHRSTRHAVSE 221
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 31.1 bits (67), Expect = 2.0
Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 190 LNQHYNKVHS-IKVIECERCNKGFPSETDYARHVPACSKTFQCPLCNKEYASRDRYTVHL 248
+ +H+ + H + C RC KG+ ++DY H+ C C + ++ + +++L
Sbjct: 117 IKKHFRRKHGGRRQWVCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRKITRSLNL 176
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 30.7 bits (66), Expect = 2.6
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 319 GRSDGLEIKTD-EISTQTVFEDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGLSR 377
G D +KT ++ + +E L S K + E E C+ET+ + EF L
Sbjct: 723 GSRDAFVVKTTVQMCSMEEYEQLKSEKRKL-EMELAKCNETIECRKL-------EFSLME 774
Query: 378 SNKETVTSETQSPDLSIKETQTCL-CLYETSKS 409
N E +TS+ + + S T+T L C+ E+ KS
Sbjct: 775 KNMEELTSKLSACEKSNSLTETQLKCMAESYKS 807
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 24/89 (26%)
Query: 191 NQHYNKVHSIKVIECERCNKGFPSETDYARHV---------------------PACSKT- 228
+Q I EC++CN F ++ YA H+ P K
Sbjct: 306 DQDETDADDINSYECQQCNLTFHGQSAYAHHLITFHKMGSKRRKINKVGKFGEPVIGKDG 365
Query: 229 -FQCPLCNKEYASRDRYTVHLLRKHPQIH 256
F+CP+CNK + + RY H + H + H
Sbjct: 366 KFECPVCNKTFEEQSRYFGH-VGSHAKYH 393
>07_03_1165 - 24459156-24460139
Length = 327
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 228 TFQCPLCNKEYASRDRYTVHLLRKHPQIHKE 258
+F C LCNKE+ SR H+ H + KE
Sbjct: 112 SFPCHLCNKEFGSRKAVHGHMRVHHAENEKE 142
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 30.3 bits (65), Expect = 3.4
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 163 ELQYYCSYETCTYSMKFGSKWFAERKFLNQHYNKVHSIKVIECER--CNKGFPSETDYAR 220
E+ + CSYE C K F + L +H + VH+ + C+ C K F + R
Sbjct: 84 EILFLCSYENC-------GKTFVDVAALRKHAH-VHNERQYICQEPGCGKKFVDSSKLKR 135
Query: 221 H--VPACSKTFQCPL--CNKEYASRDRYTVHL 248
H + K F CP C K ++ HL
Sbjct: 136 HHLIHTGQKDFICPHPGCGKAFSLDFNLRSHL 167
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 166 YYCSYETCTYSMKFGSKWFAERKFL--NQHYNKVHSIKVIECERC-NKGFPSETDYARHV 222
Y C E C ++ + ++ A + + HY + H K+ C RC K F +D H
Sbjct: 370 YSCPAEGCRWNRRH-PRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLSDLRTHE 428
Query: 223 PACSKTFQCPLCNKEYASRDRYTVHL 248
C + C ++ +D+ H+
Sbjct: 429 KHCGELRWLCSCGTFFSRKDKLMGHV 454
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 29.9 bits (64), Expect = 4.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 229 FQCPLCNKEYASRDRYTVHL 248
F+CP+CNK + + RY H+
Sbjct: 361 FECPVCNKTFEEQSRYFGHI 380
>12_01_0513 +
4059586-4059620,4060155-4060365,4060470-4060724,
4060801-4060865,4061120-4061194,4061440-4061575,
4061661-4061753,4061838-4061983,4062074-4062174,
4062259-4062434,4063823-4063900,4063991-4064199,
4064286-4064378,4064888-4064971,4065405-4065506,
4065591-4065678,4065756-4065809,4065869-4066075,
4066970-4067026,4067171-4067225,4067737-4067813,
4067941-4068007,4068383-4068444,4068541-4068603,
4068702-4068830
Length = 905
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 328 TDEISTQTVFEDLLSIKSQTSEDESIFCSETVSLSDIQTQTFPIEFGL 375
T E+++Q E + K + IFCS TV++ DI+ F +E+ L
Sbjct: 359 TQELNSQEEVEPVKETKFAICQQ--IFCSRTVNMEDIKAIGFKMEYTL 404
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.1 bits (62), Expect = 7.9
Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 57 ENISEFLCTTCEDMLMICKRFKSQCQQSNSIMMNWI----KTTTSDSSVPQNITRHILTE 112
E++ + L C ++ K + + M+ + + S+ S Q + + TE
Sbjct: 1310 EDMHDILNEACTRAELLKKEVDGESSKRRKAEMDLLIALQRVQESEKSYLQEVNQRKETE 1369
Query: 113 NKLTVILLAPDRLAKVYITCPLDCNERYIKKRDLLTHLNRKHNYSKDFAVELQYYCSYET 172
L L D + + + T + + +K L H++ + +KD+ E+ Y E+
Sbjct: 1370 RTLARQRLEIDEMKRRHNTLYDELQDTKKQKLLLEQHISEIKSAAKDYVQEITEYFIQES 1429
Query: 173 CTYSMKF 179
C + KF
Sbjct: 1430 CEEAKKF 1436
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.130 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,877
Number of Sequences: 37544
Number of extensions: 468485
Number of successful extensions: 1229
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 66
length of query: 468
length of database: 14,793,348
effective HSP length: 85
effective length of query: 383
effective length of database: 11,602,108
effective search space: 4443607364
effective search space used: 4443607364
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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