GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001690-TA|BGIBMGA001690-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
         (468 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    36   0.002
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    35   0.004
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    33   0.017
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    31   0.088

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 36.3 bits (80), Expect = 0.002
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 205 CERCNKGFPSETDYAR-HVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIHKEF 259
           C  C+K   +   +A  H P   ++ +CP+C +++  RD    H   KHP++   F
Sbjct: 901 CVSCHKTVSNRWHHANIHRP---QSHECPVCGQKFTRRDNMKAHCKVKHPELRDRF 953


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 35.1 bits (77), Expect = 0.004
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 190 LNQHYNKVHSI-KVIECERCNKGFPSETDYARHVPA--CSKTFQCPLCNKEYASRDRYTV 246
           L  H   +H+  K I+C+RC+  FP    Y  H       K ++C  C     S      
Sbjct: 313 LRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLES 372

Query: 247 HLLRKHPQIHKEFKMNNKAEXXXXXXXXXXXXXXXESFEDYICDSPK 293
           HLL    Q  K +K +  A+                +  DY+  +PK
Sbjct: 373 HLLLHTDQ--KPYKCDQCAQTFRQKQLLKRHMNYYHN-PDYVAPTPK 416



 Score = 30.7 bits (66), Expect = 0.088
 Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 18/137 (13%)

Query: 132 CPLDCNERYIKKRDLLTHL-NRKHNY---SKDFAV--ELQYYCSYETCT--YSMKFGSKW 183
           C    N+ ++  R L TH  +R H      + F     LQ + +  T T  +  K     
Sbjct: 132 CNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNC 191

Query: 184 FAERKFLNQH--YNKVHSIKVIECERCNKGFPSETDYARHVPACS--KTFQCPLCNKEYA 239
           F     L +H  Y   H  +  +C  C+      +   RH+   +  K FQCP C   YA
Sbjct: 192 FTTSGELIRHIRYRHTHE-RPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCT--YA 248

Query: 240 SRDRYTVHLLRKHPQIH 256
           S D++    L +H +IH
Sbjct: 249 SPDKFK---LTRHMRIH 262



 Score = 24.2 bits (50), Expect = 7.7
 Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 217 DYARHVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIHKEFKMNNKAEXXXXXXXXXX 276
           DY    P  +KT  CP C + +  +     H+    P+     +M    E          
Sbjct: 409 DYVAPTPK-AKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSKEMEALREGRQKKVQITF 467

Query: 277 XXXXXESFEDYICDSPKRSSATQTRLDD 304
                +  EDY  +  +     +   DD
Sbjct: 468 EEEIYKGEEDYEGEEDEEDEEDEYEGDD 495


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 33.1 bits (72), Expect = 0.017
 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 205 CERCNKGFPS-ETDYARHVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIHKE 258
           C+ C K        Y  H P     F+CPLC   Y   D    H   KHP  + +
Sbjct: 502 CKLCGKVVTHIRNHYHVHFPG---RFECPLCRATYTRSDNLRTHCKFKHPMFNPD 553


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 30.7 bits (66), Expect = 0.088
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 204 ECERCNKGFPSETDYARH---VPACSKT---FQCPLCNKEYASRDRYTVHLLRKHPQ 254
           +C  C+  + ++  Y +H   V   S      +C +C+K ++ R  Y +H+   HP+
Sbjct: 350 QCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406



 Score = 25.4 bits (53), Expect = 3.3
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 209 NKGFPSETD-YARHVPACSKTFQCPLCNKEYASRDRYTVHLLRKHPQIHKEF 259
           N+  P+ T   A  + +  + FQC LC+  Y ++ +Y  H    H   ++ F
Sbjct: 328 NQSQPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENF 379


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.130    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,510
Number of Sequences: 2123
Number of extensions: 18110
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 9
length of query: 468
length of database: 516,269
effective HSP length: 66
effective length of query: 402
effective length of database: 376,151
effective search space: 151212702
effective search space used: 151212702
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)