Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001689-TA|BGIBMGA001689-PA|IPR007087|Zinc finger,
C2H2-type
(632 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 95 7e-21
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 42 7e-05
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 33 0.030
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 33 0.030
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 30 0.16
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 28 0.65
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 4.6
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 25 6.1
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 94.7 bits (225), Expect = 7e-21
Identities = 94/352 (26%), Positives = 143/352 (40%), Gaps = 51/352 (14%)
Query: 140 CGLCPKVYLSNQS--LKRHLRTRHLTGEEQYRCEYCNTVFKGNEELEAHVRSLHAGEVSE 197
C C Y SN+ L RHL+T + + ++C C FK L+ HV + H G
Sbjct: 129 CNYCN--YTSNKLFLLSRHLKTH--SEDRPHKCVVCERGFKTLASLQNHVNT-HTGTKPH 183
Query: 198 TTDEESRVDRRCEDCDQTFPAEKLLRQHVKNVHTFSAFYK-----YCKDSLTKRAAGVP- 251
RC+ CD F L +H++ HT +K Y L+K +
Sbjct: 184 ----------RCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRT 233
Query: 252 ---KELYHCESCREGFITVYELKTHMRITHDIEYSWSTCNVCFERFYSKLSMAEHKRRCL 308
++ + C C ++L HMRI H E +S C+VCF RF S+ HK +
Sbjct: 234 HTGEKPFQCPHCTYASPDKFKLTRHMRI-HTGEKPYS-CDVCFARFTQSNSLKAHKM--I 289
Query: 309 PPPDAKACSYCDKLFTDVTSREFHTPIFHPQARTADPDTRPANRDGNSFKCVHCHRIYYS 368
K C KL R+ I TAD +P KC C +
Sbjct: 290 HQVGNKPVFQC-KLCPTTCGRKTDLRIHVQNLHTAD---KP-------IKCKRCDSTFPD 338
Query: 369 ERSLKHHIKLKHSTDEAMECKSCGKICSNKYYLASHMKIVHSTNDWSKCDFCDKQFKSKR 428
S K H K H ++ C+ C + +L SH+ ++H+ KCD C + F+ K+
Sbjct: 339 RYSYKMHAKT-HEGEKCYRCEYCPYASISMRHLESHL-LLHTDQKPYKCDQCAQTFRQKQ 396
Query: 429 NIRRHIEYTH--------MGMQRHKCIECETLFKEKRSLRKHVRSKHPNSAL 472
++RH+ Y H + H C C+ F+ K +L +H+ P S +
Sbjct: 397 LLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPESTV 448
Score = 89.4 bits (212), Expect = 2e-19
Identities = 74/303 (24%), Positives = 115/303 (37%), Gaps = 51/303 (16%)
Query: 338 PQARTADPDTRPANRDGNSFKCVHCHRIYYSERSLKHHIKLKHSTDEAMECKSCGKICSN 397
P +T R G+++ C +C+ L H+K HS D +C C +
Sbjct: 108 PAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKT-HSEDRPHKCVVCERGFKT 166
Query: 398 KYYLASHMKIVHSTNDWSKCDFCDKQFKSKRNIRRHIEYTHMGMQRHKCIECETLFKEKR 457
L +H+ H+ +C CD F + + RHI Y H + HKC EC+ E
Sbjct: 167 LASLQNHVN-THTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELS 225
Query: 458 SLRKHVRSKHPNSALF--PQC-------------------------HICYKRFESAKSCK 490
L++H+R+ H F P C +C+ RF + S K
Sbjct: 226 KLKRHIRT-HTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLK 284
Query: 491 IHLKLLHAFNMDTFPCHLCSVSFGSDEALSIHLKTKHLVEDQIYKCEECNLVFKGQDKFD 550
H + N F C LC + G L IH++ H + I KC+ C+ F + +
Sbjct: 285 AHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPI-KCKRCDSTFPDRYSYK 343
Query: 551 AHNET-------------------RHVNSAESSKQKVLP-RCILCMKDFSTRKTLKRHIK 590
H +T RH+ S P +C C + F ++ LKRH+
Sbjct: 344 MHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMN 403
Query: 591 KFH 593
+H
Sbjct: 404 YYH 406
Score = 76.2 bits (179), Expect = 2e-15
Identities = 79/327 (24%), Positives = 124/327 (37%), Gaps = 52/327 (15%)
Query: 14 YVCDYCNRIFTRKYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYGQPLP 73
Y+C+YCN + + L H++ + C VC + F T H++ H G
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNT-HT--GTKPH 183
Query: 74 ECDLCGRIFTRKQNIVSHM-----------------ITVHLQGLGNEIRCRFCSKTF--- 113
C C FT ++ H+ +V L L IR K F
Sbjct: 184 RCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCP 243
Query: 114 -TTGPYTNERNLKRHVDMFHGVKGEHHCGLCPKVYLSNQSLKRHLRTRHLTGEEQYRCEY 172
T ++ L RH+ + G K + C +C + + SLK H + + ++C+
Sbjct: 244 HCTYASPDKFKLTRHMRIHTGEK-PYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKL 302
Query: 173 CNTVFKGNEELEAHVRSLHAGEVSETTDEESRVDRRCEDCDQTFPAEKLLRQHVKNVHTF 232
C T +L HV++LH T D+ +C+ CD TFP + H K H
Sbjct: 303 CPTTCGRKTDLRIHVQNLH------TADKPI----KCKRCDSTFPDRYSYKMHAK-THEG 351
Query: 233 SAFYK--YCK-DSLTKR------AAGVPKELYHCESCREGFITVYELKTHMRITHDIEYS 283
Y+ YC S++ R ++ Y C+ C + F LK HM H+ +Y
Sbjct: 352 EKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYV 411
Query: 284 WST-------CNVCFERFYSKLSMAEH 303
T C C F K ++ H
Sbjct: 412 APTPKAKTHICPTCKRPFRHKGNLIRH 438
Score = 35.5 bits (78), Expect = 0.004
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Query: 5 QNMSMSLLDYVCDYCNRIFTRKYNLQTHIENLHVNSSCH-CEVCGKRFGTTTGFHLHLSA 63
QN+ + C C+ F +Y+ + H + H C+ CE C + + + HL
Sbjct: 318 QNLHTADKPIKCKRCDSTFPDRYSYKMHAKT-HEGEKCYRCEYC--PYASISMRHLESHL 374
Query: 64 GHNRYGQPLPECDLCGRIFTRKQNIVSHMITVH 96
+ +P +CD C + F +KQ + HM H
Sbjct: 375 LLHTDQKPY-KCDQCAQTFRQKQLLKRHMNYYH 406
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 41.5 bits (93), Expect = 7e-05
Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Query: 346 DTRPANRDGNSFKCVHCHRIYYSERSLKHHIKLKHSTDEAMECKSCGKICSNKYYLASHM 405
DT A + + ++C C ++ + +H K + + S S +
Sbjct: 281 DTAAAPTNHHLYRCPACGNLFVELTNFYNHSCTKAPAQDGVAVASSNNQSQPARTGGSAV 340
Query: 406 KIVHSTNDWSKCDFCDKQFKSKRNIRRHIEYTHMGMQRH---KCIECETLFKEKRSLRKH 462
I S +C+ CD +++K ++H H + KC C LF +++ + H
Sbjct: 341 TIT-SEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLH 399
Query: 463 VRSKHP 468
+R+ HP
Sbjct: 400 MRAIHP 405
Score = 38.7 bits (86), Expect = 5e-04
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 388 CKSCGKICSNKYYLASHMKIVHSTNDWSKCDFCDKQFKSKRNIRRHIEYTHMGMQRHKCI 447
C +CG + +H D + Q + R + T G QR +C
Sbjct: 294 CPACGNLFVELTNFYNHSCTKAPAQDGVAVASSNNQSQPARTGGSAVTITSEG-QRFQCN 352
Query: 448 ECETLFKEKRSLRKHVRSKH--PNSALFPQCHICYKRFESAKSCKIHLKLLH 497
C+ ++ K +KH H N +C IC+K F + ++H++ +H
Sbjct: 353 LCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404
Score = 34.3 bits (75), Expect = 0.010
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 140 CGLCPKVYLSNQSLKRHLRTRHLTGEEQY--RCEYCNTVFKGNEELEAHVRSLH 191
C LC Y + ++H H E + +C C+ +F ++ + H+R++H
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404
Score = 32.3 bits (70), Expect = 0.040
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 530 EDQIYKCEECNLVFKGQDKFDAHNETRHVNSAESSKQKVLPRCILCMKDFSTRKTLKRHI 589
E Q ++C C++ ++ + ++ H H S E+ K C +C K FS R+ + H+
Sbjct: 345 EGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIK----CTICHKLFSQRQDYQLHM 400
Query: 590 KKFH 593
+ H
Sbjct: 401 RAIH 404
Score = 32.3 bits (70), Expect = 0.040
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 14 YVCDYCNRIFTRKYNLQTHIENLH----VNSSCHCEVCGKRFGTTTGFHLHLSAGHNRYG 69
+ C+ C+ + K Q H +H N C +C K F + LH+ A H + G
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPKPG 408
Score = 29.5 bits (63), Expect = 0.28
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 13/121 (10%)
Query: 44 CEVCGKRFGTTTGFHLHLSAGHNRYGQPLPECDLCGRIFTRKQNIVSHMITVHLQGLGNE 103
C CG F T F+ H+ P + + Q + V + G
Sbjct: 294 CPACGNLFVELTNFY-----NHSCTKAPAQDGVAVASSNNQSQPARTGGSAVTITSEGQR 348
Query: 104 IRCRFCSKTFTTGPYTNERNLKRHVDMFHGVKGEH---HCGLCPKVYLSNQSLKRHLRTR 160
+C C ++ T + ++H H + E+ C +C K++ Q + H+R
Sbjct: 349 FQCNLCDMSYRT-----KLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAI 403
Query: 161 H 161
H
Sbjct: 404 H 404
Score = 29.1 bits (62), Expect = 0.37
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 287 CNVCFERFYSKLSMAEHK---RRCLPPPDAKACSYCDKLFTDVTSREFHTPIFHPQ 339
CN+C + +KL +H+ R C+ C KLF+ + H HP+
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.030
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 345 PDTRPANRDGNSFKCVHCHRIYYSERSLKHHIKLKHSTDEAMECKSCGKICSNKYYLASH 404
P + ++ DG H H + + S + A C+SCGK +N+++ H
Sbjct: 487 PSSLVSSPDGTDLPH-HTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWH---H 542
Query: 405 MKIVHS-TNDWSKCDFCDKQFKSKRNIRRHIEYTH 438
HS T S C +C + +R H+ H
Sbjct: 543 F---HSHTPQRSLCPYCPASYSRIDTLRSHLRIKH 574
Score = 31.9 bits (69), Expect = 0.053
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 398 KYYLASHMKIVHSTNDWSKCDFCDKQFKSKRNIRRHIEYTHM---GMQRHKCIECETLFK 454
+++L+ H + ++ S D D + + + Y +M + C + K
Sbjct: 475 EHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGK 534
Query: 455 EKRSLRKHVRSKHPNSALFPQCHICYKRFESAKSCKIHLKLLHA 498
E + H S P +L P C Y R ++ +S HL++ HA
Sbjct: 535 EVTNRWHHFHSHTPQRSLCPYCPASYSRIDTLRS---HLRIKHA 575
Score = 26.6 bits (56), Expect = 2.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 416 KCDFCDKQFKSKRNIRRHIEYTHMGMQRHKCIECETLFKEKRSLRKHVRSKHPNSALFPQ 475
+C C K+ + R H ++H QR C C + +LR H+R KH + P+
Sbjct: 528 RCRSCGKEVTN----RWHHFHSHTP-QRSLCPYCPASYSRIDTLRSHLRIKHADRLNAPK 582
Score = 26.2 bits (55), Expect = 2.6
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 12/62 (19%)
Query: 101 GNEIRCRFCSKTFTTGPYTNERNLKRHVDMFHGVKGEHH-CGLCPKVYLSNQSLKRHLRT 159
G RCR C K T N H FH + C CP Y +L+ HLR
Sbjct: 524 GTAWRCRSCGKEVT--------NRWHH---FHSHTPQRSLCPYCPASYSRIDTLRSHLRI 572
Query: 160 RH 161
+H
Sbjct: 573 KH 574
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 32.7 bits (71), Expect = 0.030
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 345 PDTRPANRDGNSFKCVHCHRIYYSERSLKHHIKLKHSTDEAMECKSCGKICSNKYYLASH 404
P + ++ DG H H + + S + A C+SCGK +N+++ H
Sbjct: 463 PSSLVSSPDGTDLPH-HTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWH---H 518
Query: 405 MKIVHS-TNDWSKCDFCDKQFKSKRNIRRHIEYTH 438
HS T S C +C + +R H+ H
Sbjct: 519 F---HSHTPQRSLCPYCPASYSRIDTLRSHLRIKH 550
Score = 31.9 bits (69), Expect = 0.053
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 398 KYYLASHMKIVHSTNDWSKCDFCDKQFKSKRNIRRHIEYTHM---GMQRHKCIECETLFK 454
+++L+ H + ++ S D D + + + Y +M + C + K
Sbjct: 451 EHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGK 510
Query: 455 EKRSLRKHVRSKHPNSALFPQCHICYKRFESAKSCKIHLKLLHA 498
E + H S P +L P C Y R ++ +S HL++ HA
Sbjct: 511 EVTNRWHHFHSHTPQRSLCPYCPASYSRIDTLRS---HLRIKHA 551
Score = 26.6 bits (56), Expect = 2.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 416 KCDFCDKQFKSKRNIRRHIEYTHMGMQRHKCIECETLFKEKRSLRKHVRSKHPNSALFPQ 475
+C C K+ + R H ++H QR C C + +LR H+R KH + P+
Sbjct: 504 RCRSCGKEVTN----RWHHFHSHTP-QRSLCPYCPASYSRIDTLRSHLRIKHADRLNAPK 558
Score = 26.2 bits (55), Expect = 2.6
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 12/62 (19%)
Query: 101 GNEIRCRFCSKTFTTGPYTNERNLKRHVDMFHGVKGEHH-CGLCPKVYLSNQSLKRHLRT 159
G RCR C K T N H FH + C CP Y +L+ HLR
Sbjct: 500 GTAWRCRSCGKEVT--------NRWHH---FHSHTPQRSLCPYCPASYSRIDTLRSHLRI 548
Query: 160 RH 161
+H
Sbjct: 549 KH 550
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 30.3 bits (65), Expect = 0.16
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 363 HRIYYSERSLKHHIKLKHSTDEAMECKSCGKICSNKYYLASHMKIVHSTNDWSKCDFCDK 422
H I YS SL I+L + C SC K SN+++ A+ +H +C C +
Sbjct: 880 HNIDYS--SL--FIQLTGTFPTLYSCVSCHKTVSNRWHHAN----IHRPQS-HECPVCGQ 930
Query: 423 QFKSKRNIRRHIEYTH 438
+F + N++ H + H
Sbjct: 931 KFTRRDNMKAHCKVKH 946
Score = 30.3 bits (65), Expect = 0.16
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 14 YVCDYCNRIFTRKYNLQTHIENLHVNSSCHCEVCGKRFGTTTGFHLHLSAGH 65
Y C C++ + ++ H N+H S C VCG++F H H
Sbjct: 899 YSCVSCHKTVSNRW----HHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKH 946
Score = 28.7 bits (61), Expect = 0.49
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 74 ECDLCGRIFTRKQNIVSHMITVH 96
EC +CG+ FTR+ N+ +H H
Sbjct: 924 ECPVCGQKFTRRDNMKAHCKVKH 946
Score = 28.3 bits (60), Expect = 0.65
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 357 FKCVHCHRIYYSERSLKHHIKLKHSTDEAMECKSCGKICSNKYYLASHMKIVH 409
+ CV CH+ S R HH + ++ EC CG+ + + + +H K+ H
Sbjct: 899 YSCVSCHKTV-SNRW--HHANIHRP--QSHECPVCGQKFTRRDNMKAHCKVKH 946
Score = 27.1 bits (57), Expect = 1.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 442 QRHKCIECETLFKEKRSLRKHVRSKHP 468
Q H+C C F + +++ H + KHP
Sbjct: 921 QSHECPVCGQKFTRRDNMKAHCKVKHP 947
Score = 26.6 bits (56), Expect = 2.0
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 444 HKCIECETLFKEKRSLRKHVRSKHPNSALFPQCHICYKRFESAKSCKIHLKLLHAFNMDT 503
+ C+ C K + H P S +C +C ++F + K H K+ H D
Sbjct: 899 YSCVSCH---KTVSNRWHHANIHRPQSH---ECPVCGQKFTRRDNMKAHCKVKHPELRDR 952
Query: 504 FPCHL 508
F H+
Sbjct: 953 FYNHI 957
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 28.3 bits (60), Expect = 0.65
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 416 KCDFCDKQFKSKRNIRRHIEYTHMGMQRHKCIECETLFKEKRSLRKHVRSKHP 468
+C C K +IR H G R +C C + +LR H + KHP
Sbjct: 501 RCKLCGKVVT---HIRNHYHVHFPG--RFECPLCRATYTRSDNLRTHCKFKHP 548
Score = 27.5 bits (58), Expect = 1.1
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Query: 24 TRKYNLQTHIENLHVNSSCH-CEVCGKRFGTTTG-FHLHLSAGHNRYGQPLPECDLCGRI 81
++ ++++ E L + H C++CGK +H+H R+ EC LC
Sbjct: 481 SKAWHMRLTFERLSGGCNLHRCKLCGKVVTHIRNHYHVHFPG---RF-----ECPLCRAT 532
Query: 82 FTRKQNIVSH 91
+TR N+ +H
Sbjct: 533 YTRSDNLRTH 542
Score = 25.0 bits (52), Expect = 6.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 14 YVCDYCNRIFTRKYNLQTHIENLH 37
+ C C +TR NL+TH + H
Sbjct: 524 FECPLCRATYTRSDNLRTHCKFKH 547
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 524 KTKHLVEDQIYKCEECNLVFKGQDKFD 550
+ K L EDQI K +E N++ K +++ D
Sbjct: 244 EAKRLKEDQISKQQELNIIEKRKEEAD 270
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 25.0 bits (52), Expect = 6.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 517 EALSIHLKTKHLVEDQIYKCEE 538
EA KT+HL++ +I +C++
Sbjct: 515 EACKYEYKTRHLIDGRIVQCDQ 536
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.324 0.135 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,949
Number of Sequences: 2123
Number of extensions: 32173
Number of successful extensions: 182
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 54
length of query: 632
length of database: 516,269
effective HSP length: 68
effective length of query: 564
effective length of database: 371,905
effective search space: 209754420
effective search space used: 209754420
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 51 (24.6 bits)
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