Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001688-TA|BGIBMGA001688-PA|IPR001611|Leucine-rich repeat
(286 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19680.1 68418.m02341 leucine-rich repeat family protein cont... 54 8e-08
At1g48540.2 68414.m05428 leucine-rich repeat family protein 54 1e-07
At1g48540.1 68414.m05427 leucine-rich repeat family protein 54 1e-07
At3g17920.1 68416.m02282 leucine-rich repeat family protein cont... 49 3e-06
At1g78230.1 68414.m09116 leucine-rich repeat family protein 47 2e-05
At4g03260.1 68417.m00445 leucine-rich repeat family protein cont... 41 0.001
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 40 0.002
At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferlin... 40 0.002
At3g25670.1 68416.m03195 leucine-rich repeat family protein cont... 39 0.003
At1g74180.1 68414.m08591 leucine-rich repeat family protein cont... 39 0.003
At1g14390.1 68414.m01706 leucine-rich repeat transmembrane prote... 35 0.072
At2g02780.1 68415.m00221 leucine-rich repeat transmembrane prote... 34 0.095
At5g49290.1 68418.m06100 leucine-rich repeat family protein cont... 34 0.13
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont... 33 0.17
At3g49020.1 68416.m05355 F-box family protein contains F-box dom... 33 0.29
At1g54480.1 68414.m06214 leucine-rich repeat family protein cont... 32 0.38
At1g07390.1 68414.m00788 leucine-rich repeat family protein cont... 32 0.38
At5g07910.1 68418.m00914 leucine-rich repeat family protein cont... 32 0.51
At5g41820.1 68418.m05092 geranylgeranyl transferase alpha subuni... 31 0.89
At3g13065.1 68416.m01632 leucine-rich repeat transmembrane prote... 31 1.2
At2g25470.1 68415.m03050 leucine-rich repeat family protein cont... 31 1.2
At5g41220.1 68418.m05009 glutathione S-transferase, putative sim... 30 1.6
At1g62890.1 68414.m07101 hypothetical protein 29 2.7
At5g36740.1 68418.m04402 PHD finger family protein 29 4.7
At5g36670.1 68418.m04388 PHD finger family protein 29 4.7
At4g24490.1 68417.m03510 geranylgeranyl transferase alpha subuni... 29 4.7
At2g17440.1 68415.m02012 leucine-rich repeat family protein cont... 29 4.7
At4g23360.1 68417.m03369 expressed protein predicted proteins, A... 28 6.3
At2g34930.1 68415.m04288 disease resistance family protein conta... 28 6.3
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 28 6.3
At5g53890.1 68418.m06703 leucine-rich repeat transmembrane prote... 28 8.3
>At5g19680.1 68418.m02341 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 328
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 4 KVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLY 63
KV L LK ++ +SL N + S G E LEEL++S+N I K++G+ L NLRVL
Sbjct: 189 KVVNLCGLKCIKKISLQSNRLTSMKGFEECV-ALEELYLSHNGISKMEGLSALVNLRVLD 247
Query: 64 MSNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
+SNN + + + +Q+L L+DL N +
Sbjct: 248 VSNN---KLTSVDDIQNLTKLEDLWLNDNQI 275
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
+ KV ++ KL + + N I S G+ TL+EL+VS N + K+ + L NL++
Sbjct: 99 LAKVPDVSIFTKLLVYDISFNEITSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQI 158
Query: 62 LYMSNN---LVKEWSEFNKLQDL 81
L + +N +++ F KL++L
Sbjct: 159 LELGSNRLRVMENLENFTKLEEL 181
Score = 41.1 bits (92), Expect = 8e-04
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVL----- 56
I K+ GL++L LR+L + N + S +++L LE+LW++ N IE L+ +
Sbjct: 231 ISKMEGLSALVNLRVLDVSNNKLTSVDDIQNL-TKLEDLWLNDNQIESLEAITEAVTGSK 289
Query: 57 RNLRVLYMSNNLVKEWSEFNKL--QDLPNLDDL 87
L +Y+ NN + S++ Q PN++ +
Sbjct: 290 EKLTTIYLENNPCAKSSDYVAAVRQIFPNVEQI 322
>At1g48540.2 68414.m05428 leucine-rich repeat family protein
Length = 1051
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 4 KVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLY 63
KV L KL+ L LG N++++ + + + L +L + N + L+G+ L++L+ L
Sbjct: 205 KVDNLRRCTKLKHLDLGFNHLRTVSYLSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLD 264
Query: 64 MSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAAR--RLPNLKKLDGET 121
+S N++ +SE L L L +L GNP+ C +R+ LP+ KLDG+
Sbjct: 265 VSYNIISNFSELEFLWSLSQLKELWLEGNPV---CCARWYRAHVFSYVALPDELKLDGKQ 321
Query: 122 V 122
+
Sbjct: 322 I 322
>At1g48540.1 68414.m05427 leucine-rich repeat family protein
Length = 1063
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 4 KVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLY 63
KV L KL+ L LG N++++ + + + L +L + N + L+G+ L++L+ L
Sbjct: 205 KVDNLRRCTKLKHLDLGFNHLRTVSYLSQVSCHLVKLVLRNNALTTLRGIENLKSLQGLD 264
Query: 64 MSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAAR--RLPNLKKLDGET 121
+S N++ +SE L L L +L GNP+ C +R+ LP+ KLDG+
Sbjct: 265 VSYNIISNFSELEFLWSLSQLKELWLEGNPV---CCARWYRAHVFSYVALPDELKLDGKQ 321
Query: 122 V 122
+
Sbjct: 322 I 322
>At3g17920.1 68416.m02282 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 962
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 4 KVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLY 63
KV L KL+ L LG N ++ + + +G N + L+G+ L++L L
Sbjct: 205 KVDNLRRCNKLKHLDLGFNQLRKISHLSEVGKFRN------NALTTLRGIENLKSLEGLD 258
Query: 64 MSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAAR--RLPNLKKLDGET 121
+S NL+ ++SE L L L DL GNP+ C +R+ LPN KLDG+
Sbjct: 259 VSFNLISDFSELEFLGSLSFLTDLWLEGNPI---CCARWYRAHVLSYVYLPNDLKLDGKH 315
Query: 122 V 122
+
Sbjct: 316 I 316
>At1g78230.1 68414.m09116 leucine-rich repeat family protein
Length = 676
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
I + GL L +LR+L L N I S ++EL+++ N I ++G+H L L V
Sbjct: 480 ISVIEGLRDLTRLRVLDLSYNRISRIGQGLSNCTLIKELYLAGNKISNVEGLHRLLKLIV 539
Query: 62 LYMSNNLVKEWSEFNKL-QDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNL 114
L +S N + +L + +L L +GNP+ + D R + LP L
Sbjct: 540 LDLSFNKIATTKAIGQLVANYNSLVALNILGNPIQNNVGEDQLRKTVSSLLPKL 593
>At4g03260.1 68417.m00445 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 677
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
I + GL L +LR+L L N I + +L+EL+++ N I +++G+H L L V
Sbjct: 453 ISVIEGLRELTRLRVLDLSYNRILRLGHGLASCSSLKELYLAGNKISEIEGLHRLLKLTV 512
Query: 62 LYMSNNLVKEWSEFNKL-QDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNL 114
L + N +L + +L + GNP + R LPNL
Sbjct: 513 LDLRFNKFSTTKCLGQLAANYSSLQAISLEGNPAQKNVGDEQLRKYLLGLLPNL 566
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
++ + G+ +L KL +L+ G+N +KS + SL + L L ++ N I + + +L++L
Sbjct: 75 LQSLNGIEALTKLTVLNAGKNKLKSMNEISSLVN-LRALILNDNEISSICKLDLLKDLNS 133
Query: 62 LYMSNNLVKEWSE-FNKLQDLPNL 84
L +S N + E + +KL++L +
Sbjct: 134 LVLSRNPISEIGDSLSKLKNLSKI 157
Score = 33.5 bits (73), Expect = 0.17
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 8 LNSLKKLRILSLGRNYIKSF-AGMESLGDTLEELWVSYNLIEKLKG-VHVLRNLRVLYMS 65
L+ LK L +SL IK+ + ++S D L+EL ++ N I+ L + V + L L +
Sbjct: 148 LSKLKNLSKISLSDCRIKAIGSSLKSCSD-LKELRLANNEIKALPAELAVNKRLLNLDVG 206
Query: 66 NNLVKEWSEFNKLQDLPNLDDLLFVGNPLYD 96
NN++ + S L L L +L GNP+ D
Sbjct: 207 NNVITQLSGLEVLGTLSCLRNLNIRGNPISD 237
>At1g71440.1 68414.m08253 tubulin folding cofactor E / Pfifferling
(PFI) almost identical to tubulin folding cofactor E
(Pfifferling; PFI) GI:20514267 from [Arabidopsis
thaliana]; identical to cDNA tubulin folding cofactor E,
GI:20514266
Length = 531
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 5 VTGLNSLKKLRILSLGRNYIKSFAGMESLGDTL---EELWVSYNLIEKLKGV-----HVL 56
+ L LK +R+L L + + S+ +E L +L EEL + N+I +
Sbjct: 202 IKSLPQLKNIRVLVLNNSGL-SWTQVEILRRSLPGIEELHLMGNMISTITSTSSSDDQAF 260
Query: 57 RNLRVLYMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
+LR+L + +N + +WSE KL LP L+ L N L
Sbjct: 261 NSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKL 298
Score = 33.5 bits (73), Expect = 0.17
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 11 LKKLRILSLGRNYIKSFAGMESLGDTLEELW---VSYN-LIEKLKGVHVLRNLRVLYMSN 66
L L++L L N I + + +L + L L +S N L +K + L+N+RVL + N
Sbjct: 159 LPNLKLLDLTGNLISDWEEIGALCEQLPALTTLNLSCNSLSSDIKSLPQLKNIRVLVL-N 217
Query: 67 NLVKEWSEFNKL-QDLPNLDDLLFVGN 92
N W++ L + LP +++L +GN
Sbjct: 218 NSGLSWTQVEILRRSLPGIEELHLMGN 244
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 10 SLKKLRILSLGRNYIKSFAGMESLGDT--LEELWVSYNLIEKL-----------KGVHVL 56
+ LR+L+L N I ++ + L LE+L+++ N + ++ KG
Sbjct: 259 AFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLSRIFQSVNGTESSEKGSDPF 318
Query: 57 RNLRVLYMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKK 116
+L L + N + + + + L P L D+ NP+ D R RL ++
Sbjct: 319 PSLSCLLLGANNIGDLASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVLVARLTKVQV 378
Query: 117 LDGETV 122
L+G V
Sbjct: 379 LNGSEV 384
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 55 VLRNLRVLYMSNNLVKEWSEFNKL-QDLPNLDDLLFVGNPL 94
+L NL++L ++ NL+ +W E L + LP L L N L
Sbjct: 158 ILPNLKLLDLTGNLISDWEEIGALCEQLPALTTLNLSCNSL 198
>At3g25670.1 68416.m03195 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; +
Length = 475
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 9 NSLKKLRILSLGRNYIKSFAGME--SLGD--TLEELWVSYNLIE-KL-KGVHVLRNLRVL 62
N K L IL + RN SF+G+ S+G+ +L +L +S N +E +L + + L+NL +L
Sbjct: 208 NGFKDLLILDMSRN---SFSGILPLSVGEMVSLLKLDLSNNQLEGRLPQEIGFLKNLTLL 264
Query: 63 YMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
+ NN + F ++ +P+L DL+ GNP+
Sbjct: 265 DLRNNRISG-GLFENIEKIPSLTDLVLSGNPM 295
>At1g74180.1 68414.m08591 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 951
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 8 LNSLKKLRILSLGRNYIKSF--AGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMS 65
L L KLR L+L RN + S A L D +E L +SYN+++ H L NL L +
Sbjct: 778 LGDLSKLRALNLSRNLLSSSIPANFSKLKD-IESLDLSYNMLQG-NIPHQLTNLTSLAVF 835
Query: 66 N-------NLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACE 99
N ++ + +FN D L + L G P +CE
Sbjct: 836 NVSFNNLSGIIPQGGQFNTFNDNSYLGNPLLCGTPTDRSCE 876
>At1g14390.1 68414.m01706 leucine-rich repeat transmembrane protein
kinase, putative similar to putative receptor-like
protein kinase GI:2947063 from [Arabidopsis thaliana]
Length = 747
Score = 34.7 bits (76), Expect = 0.072
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 5 VTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKL--KGVHVLRNLRVL 62
+T L++LK L ++SLG + + + L +L+ L +S N I K + L+NLR L
Sbjct: 103 LTKLSNLKTLSLVSLGISGPLP-SQIIRLSSSLQSLNLSSNFISGNIPKEISSLKNLRSL 161
Query: 63 YMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
++NNL L+ L NL +L GN L
Sbjct: 162 VLANNLFN--GSVPDLRGLSNLQELNLGGNKL 191
>At2g02780.1 68415.m00221 leucine-rich repeat transmembrane protein
kinase, putative
Length = 753
Score = 34.3 bits (75), Expect = 0.095
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 5 VTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIE-KL-KGVHVLRNLRVL 62
+T L+SLK L + SLG + S + L +LE L +S N I K+ + + L+NL+ L
Sbjct: 101 LTQLSSLKTLSLTSLGISGSLSPKIITKLSPSLESLNLSSNFISGKIPEEIVSLKNLKSL 160
Query: 63 YMSNNLVKEWS-EFNKLQDLPNLDDLLFVGNPL 94
+ +N+ W + L+ L NL +L GN L
Sbjct: 161 VLRDNMF--WGFVSDDLRGLSNLQELDLGGNKL 191
>At5g49290.1 68418.m06100 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 888
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 8 LNSLKKLRILSLGRNYIKSFA--GMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMS 65
L L KLR L+L N++ S L D +E L +SYN+++ H L NL L +
Sbjct: 719 LGDLFKLRALNLSHNFLSSHIPDSFSKLQD-IESLDLSYNMLQG-SIPHQLTNLTSLAIF 776
Query: 66 N-------NLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACE 99
N ++ + +FN + L + L G P +CE
Sbjct: 777 NVSYNNLSGIIPQGKQFNTFDENSYLGNPLLCGPPTDTSCE 817
>At2g34680.1 68415.m04260 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; identical to cDNA hypothetical protein
(AIR9) mRNA, partial cds GI:3695020
Length = 1661
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 17 LSLGRNYIKSF-AGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSNNLVKEWSEF 75
L L + I+S +G L LE +++ NL+ L+G+ +L ++VL +S N K F
Sbjct: 273 LDLRGHRIRSLTSGGLHLSPNLEFVYLRDNLLSTLEGIEILNRVKVLDLSFNDFK-GPGF 331
Query: 76 NKLQDLPNLDDLLFVGNPLYDACEL 100
L++ L L GN + L
Sbjct: 332 EPLENCKMLQQLYLAGNQITSLASL 356
>At3g49020.1 68416.m05355 F-box family protein contains F-box domain
Pfam:PF00646
Length = 447
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 14 LRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSN-NLVKEW 72
L+I L ++++ + S DTLE L + Y ++ + L++LR LY+ + E
Sbjct: 125 LKITLLEESFVRFPSAWCSCNDTLEILELKYCILLDFPSLVCLKSLRKLYLYHVRFNDEE 184
Query: 73 SEFNKLQDLPNLDDLL 88
S N L P+L+DL+
Sbjct: 185 SVCNLLCGCPSLEDLV 200
>At1g54480.1 68414.m06214 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]
Length = 550
Score = 32.3 bits (70), Expect = 0.38
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 8 LNSLKKLRILSLGRNYIKSF--AGMESLGDTLEELWVSYNLI-----EKLKGVHVLRNLR 60
L SL KLR+++L N++ S + +L D +E L +S+N++ ++L + L
Sbjct: 381 LGSLSKLRVMNLSCNFLSSSIPSSFSNLKD-IESLDLSHNMLQGSIPQQLTNLSSLVVFD 439
Query: 61 VLYMS-NNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACE 99
V Y + + ++ + +FN + L + L G P +C+
Sbjct: 440 VSYNNLSGIIPQGRQFNTFDEKSYLGNPLLCGPPTNRSCD 479
>At1g07390.1 68414.m00788 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 976
Score = 32.3 bits (70), Expect = 0.38
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 7 GLNSLKKLRILSLGRNYIKSFAGMESLGDT-LEELWVSYNLIE---KLKGVHVLRNLRVL 62
GL + L +L L N + SL L+ L +++N + +LKG+ L+ L+VL
Sbjct: 179 GLTDFRDLEVLDLSFNGVNDSEASHSLSTAKLKTLDLNFNPLSDFSQLKGLESLQELQVL 238
Query: 63 YMSNNLVKEWSEFNKLQDLPNLDDL 87
+ N + L+DL L +L
Sbjct: 239 KLRGNKFNHTLSTHVLKDLKMLQEL 263
>At5g07910.1 68418.m00914 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 262
Score = 31.9 bits (69), Expect = 0.51
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGD--TLEELWVSYNLIEKL-KGVHVLRNLRVLYM 64
+ SL+ L +L++ N +KS ES+G +LEE+ + N++E+L + L L+ L +
Sbjct: 133 IGSLRNLLLLNVSNNRLKSLP--ESVGSCASLEEVQANDNVVEELPASLCNLIQLKSLSL 190
Query: 65 SNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
NN V + + L +L +L NP+
Sbjct: 191 DNNQVNQIPD-GLLIHCKSLQNLSLHNNPI 219
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 12 KKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKG-VHVLRNLRVLYMSNNLV 69
+ +R L L N I G S ++ L ++ NL+E+L G + L++L+VL + N +
Sbjct: 45 RAVRTLDLTHNKIADVPGEISKLINMQRLLIADNLVERLPGNLGKLQSLKVLMLDGNRI 103
>At5g41820.1 68418.m05092 geranylgeranyl transferase alpha
subunit-related / RAB geranylgeranyltransferase alpha
subunit-related low similarity to SP|Q08602 [Rattus
norvegicus]
Length = 687
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 10 SLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSNNLV 69
++ + L L + A +E L ++ L +S+N + +G+ ++ L L +S+N +
Sbjct: 522 NMNNIICLRLNNLTLSRIAAVEKLL-FVQMLDLSHNELHSAEGLEAMQLLCCLNLSHNRI 580
Query: 70 KEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKKLDGETVLREDDPP 129
+ +S + L+ L L L N + +DT R + L N + E + D
Sbjct: 581 RSFSALDSLRHLKQLRVLDVSHNHICGELPVDTTRYLCSSPLSNSGETGREVPNKYQDAY 640
Query: 130 LTVAN-MQIKRI 140
L + + M++K++
Sbjct: 641 LVLRDLMKLKQL 652
>At3g13065.1 68416.m01632 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich repeat transmembrane
protein kinase 1 GB:AAC27894 from [Zea mays]
Length = 646
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 11 LKKLRILSLGRNYIKS-FAGMESLGDTLEELWVSYN-LIEKL-KGVHVLRNLRVLYMSNN 67
+ L L+LGRN + + M LE + +S N L KL + L L+ L++ N
Sbjct: 99 MNDLSYLNLGRNNLNGELSDMFQKLPKLETIDLSSNQLTGKLPQSFANLTGLKTLHLQEN 158
Query: 68 LVKEWSEFNKLQDLPNLDDLLFVGN 92
K N L+DLP +DD+ N
Sbjct: 159 QFK--GSINALRDLPQIDDVNVANN 181
>At2g25470.1 68415.m03050 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 910
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 6 TGLNSLKKLRILSLGRN-YIKSFAGMESLGDTLEELWVSYNLIEKL--KGVHVLRNLRVL 62
T L L KLR L+L N + S S +E L +S+N+++ + + L +L V
Sbjct: 739 TELGDLLKLRTLNLSHNSLLGSIPSSFSKLIDVESLDLSHNMLQGSIPQLLSSLTSLAVF 798
Query: 63 YMSNN----LVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEA 107
+S+N ++ + +FN ++ L + L G P +CE + EA
Sbjct: 799 DVSSNNLSGIIPQGRQFNTFEEESYLGNPLLCGPPTSRSCETNKSPEEA 847
>At5g41220.1 68418.m05009 glutathione S-transferase, putative
similar to emb|CAA10662
Length = 590
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 59 LRVLYMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKKLD 118
LR+L N V++W E + +P+ D++ V D C+ + A++ P K +
Sbjct: 188 LRLLSPHKN-VEQWIENTRKATMPHFDEVHEVLFRAKDRCQKQREMATASKPGPQSKIIQ 246
Query: 119 GETVLREDDPPLTVANMQIKR 139
T+ + D P V N +R
Sbjct: 247 FSTIGEKSDDPNLVQNTTDRR 267
>At1g62890.1 68414.m07101 hypothetical protein
Length = 195
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 55 VLRNLRVLYMSNNLVKEWSEFNKLQDLPNLD-DLLFVGNPLYDACELDTWRSEAARR 110
V R L +SN+ ++W+ L N+ DLLF+ ++ A WR ARR
Sbjct: 86 VWRTLTQRLLSNDYSRDWNRLLPLLCNTNMPTDLLFLFRYVFQASVYHIWRERNARR 142
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 92 NPLYDACELDTWRSEAAR-RLPNLKKLDGETVLREDDPPLTVANMQIKRIYTSSEQQHLD 150
NP+ D+C T+ E R NLK LDG +ED LT ++ I + + H D
Sbjct: 1015 NPV-DSCLKLTYVEEGDNDRESNLKLLDGSVEEKEDTKKLT--DIDINSLPDEVDDSHAD 1071
Query: 151 RRSTEQ 156
+ T++
Sbjct: 1072 QSDTKE 1077
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 92 NPLYDACELDTWRSEAAR-RLPNLKKLDGETVLREDDPPLTVANMQIKRIYTSSEQQHLD 150
NP+ D+C T+ E R NLK LDG +ED LT ++ I + + H D
Sbjct: 1029 NPV-DSCLKLTYVEEGDNDRESNLKLLDGSVEEKEDTKKLT--DIDINSLPDEVDDSHAD 1085
Query: 151 RRSTEQ 156
+ T++
Sbjct: 1086 QSDTKE 1091
>At4g24490.1 68417.m03510 geranylgeranyl transferase alpha
subunit-related / RAB geranylgeranyltransferase alpha
subunit-related low similarity to SP|Q08602 [Rattus
norvegicus]
Length = 683
Score = 28.7 bits (61), Expect = 4.7
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSNN 67
+N+L LR+ +L + I A +E L ++ L +S+N + +G+ ++ L L +S+N
Sbjct: 515 MNNLVCLRLNNLSLSRI---ASVEKLL-FVQMLDLSHNELHSTEGLEAMQLLSCLNLSHN 570
Query: 68 LVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKKLDGETVLREDD 127
++ +S + L+ + L +L V + +DT R + L N + G+ + + +
Sbjct: 571 RIRSFSALDSLRHVKQL-KVLDVSHNHIGKHSVDTTRYLCSSPLSNSEL--GQDDVGKQN 627
Query: 128 PPLTVANMQIKRIYTSSEQQHLDRRSTE 155
P L + T + LD E
Sbjct: 628 PGLVTKYWDAYCVLTDLNLKQLDIAGNE 655
>At2g17440.1 68415.m02012 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeats
Length = 526
Score = 28.7 bits (61), Expect = 4.7
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 10/160 (6%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKL-KGVHVLRNLRVLYMSN 66
+ SL L+ L + N I+ S ++EEL YN ++ L + V L L +L +
Sbjct: 318 IGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADYNRLKALPEAVGKLSTLEILTVRY 377
Query: 67 NLVKEWSEFNKLQDLPNLDDLLFVGNPLYDA----CELDTW-RSEAARRLPNLKKLDGET 121
N +++ + + NL +L N L C T + NL+ L G
Sbjct: 378 NNIRQLP--TTMSSMANLKELDVSFNELESVPESLCYAKTLVKLNIGNNFANLRSLPGLI 435
Query: 122 VLREDDPPLTVANMQIKRI-YTSSEQQHLDRRSTEQCHPL 160
E L ++N QI+ + Y+ +L TEQ +PL
Sbjct: 436 GNLEKLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQ-NPL 474
>At4g23360.1 68417.m03369 expressed protein predicted proteins,
Arabidopsis thaliana contains Pfam profile PF03080:
Arabidopsis proteins of unknown function; expression
supported by MPSS
Length = 873
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 177 LRRNNHNLLIHHQRIKNFGYHNPRILADKSTSLT 210
++R L+H QR+K+ G+ PR K+T+ T
Sbjct: 119 VKRTTMEDLMHAQRLKSMGFDGPRPFLTKTTNNT 152
>At2g34930.1 68415.m04288 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.1 [Lycopersicon
pimpinellifolium] gi|1184075|gb|AAC15779
Length = 905
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 11 LKKLRILSLGRNYIKSFAGMESLGDT-LEELWVSYNLIEKL--KGVHVLRNLRVLYMSNN 67
LK L +L L N + S G T L +L++ ++ ++ G L+ L L +SNN
Sbjct: 246 LKLLEVLDLSENSLNSPIPNWLFGLTNLRKLFLRWDFLQGSIPTGFKNLKLLETLDLSNN 305
Query: 68 LVKEWSEFNKLQDLPNLDDLLFVGNPL 94
L + + L DLP L L N L
Sbjct: 306 LALQGEIPSVLGDLPQLKFLDLSANEL 332
>At1g58190.1 68414.m06605 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1784
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 8 LNSLKKLRILSLGRNYI-KSFAGMESLGDTLEELWVSYNLIE---KLKGVHVLRNLRVLY 63
L LKKL IL +G N + S + +L L + N +E +K + L NL +L
Sbjct: 123 LGKLKKLEILDMGNNEVNNSVLPFLNAASSLRTLILHGNNMEGTFPMKELKDLSNLELLD 182
Query: 64 MSNNLV 69
+S NL+
Sbjct: 183 LSGNLL 188
>At5g53890.1 68418.m06703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1036
Score = 27.9 bits (59), Expect = 8.3
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGME-SLGDTLEELWVSYNLIE-----KLKGVHVLRNLRV 61
L L +LR+L L RN +K E S + L+ L +S+NL+ + G+ ++++L +
Sbjct: 84 LGELTELRVLDLSRNQLKGEVPAEISKLEQLQVLDLSHNLLSGSVLGVVSGLKLIQSLNI 143
Query: 62 LYMSNNLVKEWSEFNKLQDLP--NLDDLLFVGNPLYDAC 98
SN+L + S+ L N+ + LF G + C
Sbjct: 144 --SSNSLSGKLSDVGVFPGLVMLNVSNNLFEGEIHPELC 180
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,636,316
Number of Sequences: 28952
Number of extensions: 270274
Number of successful extensions: 648
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 610
Number of HSP's gapped (non-prelim): 56
length of query: 286
length of database: 12,070,560
effective HSP length: 80
effective length of query: 206
effective length of database: 9,754,400
effective search space: 2009406400
effective search space used: 2009406400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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