BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001688-TA|BGIBMGA001688-PA|IPR001611|Leucine-rich repeat (286 letters) Database: tribolium 317 sequences; 114,650 total letters Searching....................................................done Score E Sequences producing significant alignments: (bits) Value AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 23 3.4 AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.0 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.0 >AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like protein protein. Length = 242 Score = 22.6 bits (46), Expect = 3.4 Identities = 10/29 (34%), Positives = 15/29 (51%) Query: 99 ELDTWRSEAARRLPNLKKLDGETVLREDD 127 ++ TW + A RRL K+ E + DD Sbjct: 130 QVSTWFANARRRLKKENKMTWEPKNKTDD 158 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 21.8 bits (44), Expect = 6.0 Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 197 HNPRILADKSTSLTVVPQQASIA 219 +NP I A + SL V Q+ SIA Sbjct: 1407 NNPSISAFRKKSLAYVQQRMSIA 1429 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 21.8 bits (44), Expect = 6.0 Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 197 HNPRILADKSTSLTVVPQQASIA 219 +NP I A + SL V Q+ SIA Sbjct: 1407 NNPSISAFRKKSLAYVQQRMSIA 1429 Database: tribolium Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 114,650 Number of sequences in database: 317 Lambda K H 0.320 0.135 0.404 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 65,496 Number of Sequences: 317 Number of extensions: 2705 Number of successful extensions: 7 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 4 Number of HSP's gapped (non-prelim): 3 length of query: 286 length of database: 114,650 effective HSP length: 56 effective length of query: 230 effective length of database: 96,898 effective search space: 22286540 effective search space used: 22286540 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 43 (21.4 bits)
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