Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001688-TA|BGIBMGA001688-PA|IPR001611|Leucine-rich repeat
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 50 2e-06
03_01_0640 - 4683970-4684481,4685197-4685343,4685606-4686764,468... 50 3e-06
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 49 5e-06
02_02_0162 + 7315562-7315846,7316432-7316662,7317002-7317144,731... 45 8e-05
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 44 1e-04
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 42 4e-04
01_07_0302 - 42611150-42611812,42611881-42611961,42612064-426121... 37 0.016
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 33 0.20
06_03_0587 + 22555414-22557231 33 0.35
02_04_0572 + 23972319-23973683 33 0.35
02_02_0035 - 6253446-6255473 31 0.81
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 30 2.5
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 29 3.2
04_04_1072 - 30587344-30588034,30589866-30590035,30590682-30590879 29 3.2
04_04_0763 - 27854600-27854668,27854766-27855140,27855227-278559... 29 3.2
03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856 29 4.3
12_02_0685 + 22044167-22045228,22045319-22045504,22045630-22045947 29 5.7
12_02_0390 - 18510095-18510148,18510318-18512450,18513018-185136... 29 5.7
10_01_0099 - 1202668-1203023,1203097-1206037 29 5.7
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 29 5.7
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 29 5.7
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 29 5.7
01_06_0589 - 30446684-30446790,30446977-30447187,30447316-304473... 29 5.7
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 28 7.5
11_06_0703 + 26444128-26446215,26446525-26447226 28 7.5
04_01_0063 - 630345-633743 28 7.5
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 28 7.5
11_01_0461 + 3569700-3572373,3572477-3572847 28 9.9
04_01_0112 + 1151242-1151272,1151722-1151928,1151996-1152318,115... 28 9.9
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 9.9
02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732 28 9.9
>03_02_0199 -
6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 4 KVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLY 63
KV L KLR L LG N+++S + + + +L + N + L G+ L++L L
Sbjct: 212 KVDNLRKCTKLRNLDLGFNHLRSISSLSEACGRIVQLVLRNNALTTLHGIKNLKSLMDLD 271
Query: 64 MSNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
+S N++ +SE L L L +L GNP+
Sbjct: 272 LSYNIISNFSELEILGSLFLLQNLWLEGNPI 302
>03_01_0640 -
4683970-4684481,4685197-4685343,4685606-4686764,
4686851-4686907
Length = 624
Score = 49.6 bits (113), Expect = 3e-06
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFA-GMESLGDTLEELWVSYNLIEKLKGVHVLRNLR 60
I + GL L +LR+L+L N I G+ + G + EL+++ N I ++G+H L L
Sbjct: 427 ISVIEGLRELTRLRVLNLSYNKISRIGHGLSNCG-AIRELYLAGNKISDVEGLHRLLKLA 485
Query: 61 VLYMSNNLVKEWSEFNKL-QDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKKLDG 119
V+ +S N + +L + +L L VGNP+ D R A+ L L+ L+
Sbjct: 486 VVDLSFNKITTTKALGQLVANYSSLRALNLVGNPVQTNIGDDALRKSASGLLSRLEYLNK 545
Query: 120 ETV 122
+ V
Sbjct: 546 QPV 548
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 48.8 bits (111), Expect = 5e-06
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
I + GL L KLR+L+L N I S L EL+++ N I ++G+H L L V
Sbjct: 454 IANIEGLRELTKLRVLNLSYNRISRIGHGLSGCTALRELYLAGNKISDVEGLHRLLKLAV 513
Query: 62 LYMSNNLVKEWSEFNKL-QDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKKLDGE 120
L + N V +L + +L L VGNP+ D R LP+L L+ +
Sbjct: 514 LDLGFNKVTTARALGQLVANYHSLRALNLVGNPVQANVGDDALRRAVTGLLPHLAYLNKQ 573
Query: 121 TV 122
V
Sbjct: 574 PV 575
>02_02_0162 +
7315562-7315846,7316432-7316662,7317002-7317144,
7317267-7317381,7317940-7318020
Length = 284
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
+ K+ L L+IL LG N ++ LEEL++S+N I+K++G+ L+NLRV
Sbjct: 149 VAKMEELEHFHALQILELGSNRLRECIA-------LEELYLSHNGIQKMEGLSTLQNLRV 201
Query: 62 LYMSNN---LVKEWSEFNKLQDL 81
L +S+N +++ ++L+DL
Sbjct: 202 LDVSSNKLTAIEDVETLSRLEDL 224
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVL----- 56
I+K+ GL++L+ LR+L + N + + +E+L LE+LW++ N I L G+
Sbjct: 187 IQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLS-RLEDLWLNDNQIPSLDGIESALASSR 245
Query: 57 RNLRVLYMSNN-LVKEWSEFNKLQDL-PNLDDL 87
L +Y+ N K + + L+ + PNL+ L
Sbjct: 246 EKLTTIYLERNPCAKAPNYSSTLKTIFPNLEQL 278
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 12 KKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLI---EKLKGVHVLRNLRV------- 61
K L + + N I S G+ + TL+EL+VS N + E+L+ H L+ L +
Sbjct: 114 KGLLVFDVSFNEISSLKGLSKVSSTLKELYVSKNEVAKMEELEHFHALQILELGSNRLRE 173
Query: 62 ------LYMSNNLVKEWSEFNKLQDLPNLD 85
LY+S+N +++ + LQ+L LD
Sbjct: 174 CIALEELYLSHNGIQKMEGLSTLQNLRVLD 203
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 44.4 bits (100), Expect = 1e-04
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
I + GL L LR+L L N I + L+EL++ N I +++G+H L+ L+V
Sbjct: 382 ISTIEGLKELTLLRVLDLSYNRITKIGHGLASCPFLKELYIGGNKISEVEGLHRLK-LKV 440
Query: 62 LYMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNL 114
L + N + ++L + L + GNP + + R LP+L
Sbjct: 441 LDLHGNSLSSSKCLDQLANCGTLQSITLEGNPAQRNVGDEQLKRHVLRLLPHL 493
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRV 61
I + GL L +LR+L + N I + +L+EL++ N I ++ G+H L L+V
Sbjct: 587 ISTIEGLRELTRLRLLDISYNRISRIGHGLASCSSLKELYLGGNKISEVDGLHRLLKLKV 646
Query: 62 LYMSNNLVKEWSEFNKL-QDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNL 114
L + +N + +L + +L+ + GNP + + LPNL
Sbjct: 647 LDLRHNKISTSKGLGQLAANYSSLEAVNLDGNPAQKNVGDEHLKKYLVGLLPNL 700
>01_07_0302 -
42611150-42611812,42611881-42611961,42612064-42612150,
42612283-42612378,42612479-42612543,42612919-42612975,
42613066-42613147,42613235-42613327,42613714-42613785,
42613881-42613985
Length = 466
Score = 37.1 bits (82), Expect = 0.016
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMS-- 65
L K ++ LSL I+ + L+EL +++N I + + +N+++L +
Sbjct: 150 LMKAKAMKKLSLSHCQIEKIGSSLTACVELKELRLAHNKITTIPS-DLAKNVKILNLDLG 208
Query: 66 NNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLK 115
NNL++ S+ L +L L +L GNP+ E D + + +PNL+
Sbjct: 209 NNLIERRSDLEVLSELHYLRNLNLQGNPI---AEKDGLAKKVKKLVPNLR 255
Score = 34.7 bits (76), Expect = 0.086
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 7 GLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSN 66
GL++ L+ LS+ N + S G+E L L+ L N ++ + V L +L L +++
Sbjct: 60 GLSNCANLKWLSVIENKLVSLKGVEGL-SKLQVLNAGKNKLKTMDEVKSLTSLGALILND 118
Query: 67 NLVKEWSEFNKLQDLPNLDDLLFVGNPLY 95
N + S KL L L+ L+ NP++
Sbjct: 119 NNI---SSICKLDQLHQLNTLVLSKNPIF 144
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 1 MIEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLR 60
+I + L LRIL++G N ++S S +L EL SYN + L
Sbjct: 185 LISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLP-------TN 237
Query: 61 VLYMSNNLVKEWSEFNKLQDLPN 83
+ Y NL K W NKL+ LP+
Sbjct: 238 IGYELVNLRKLWVHMNKLRSLPS 260
>06_03_0587 + 22555414-22557231
Length = 605
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 5 VTGLNSLKKLRILSLGRNYIKSF--AGMESLGDTLEELWVSYNLIEKL--KGVHVLRNLR 60
V+ L + KL L L N ++ + + +L +LE LW+ N+I L G+ L++L
Sbjct: 434 VSSLTNCSKLTQLLLDGNNLQGNLPSCIGNLSSSLEHLWLRNNMISGLIPPGIGNLKSLN 493
Query: 61 VLYMSNN 67
LYM +N
Sbjct: 494 TLYMDDN 500
>02_04_0572 + 23972319-23973683
Length = 454
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 4 KVTGLNSLKKLRILSLGRNYIKSFAGMESLG-DTLEELWVSYNLIEKL--KGVHVLRNLR 60
++ LNSL+KL++L+L N + +L +L +S NL + G+ +L L
Sbjct: 112 QIPRLNSLRKLQVLNLSNNILDGIIPDTLTNCSSLTQLDLSINLFQGQIPLGIGLLSELS 171
Query: 61 VLYMSNNLVKEW--SEFNKLQDLPNLD 85
L +S N + SE KL L +LD
Sbjct: 172 DLVLSRNYLSGHIPSELGKLSKLSSLD 198
>02_02_0035 - 6253446-6255473
Length = 675
Score = 31.5 bits (68), Expect = 0.81
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 5 VTGLNSLKKLRILSLGRNYIKSF--AGMESLGDTLEELWVSYNLIEKLKGVHV--LRNLR 60
++ L + +L+ L L N ++ + + +L LE LW+ N I + LR+L
Sbjct: 458 LSSLANCTQLKKLCLDGNSLEGSLPSSVGNLAPQLEWLWLKQNKIYGTIPSEIGNLRSLT 517
Query: 61 VLYMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLY 95
+LYM NNL + +L NL L F N L+
Sbjct: 518 ILYMDNNLFSGHIP-PSIGNLSNLQALSFALNDLF 551
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKL-KGVHVLRNLRVLYMSN 66
L ++ L +L + RN +K+ + LEEL ++ N + L + +L +L++L +S
Sbjct: 210 LGRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVSLPDSIGLLTSLKILDVSG 269
Query: 67 NLVKEWSE-FNKLQDLPNLD 85
N ++ + +K + L LD
Sbjct: 270 NKLRSLPDSISKCRSLVELD 289
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 11 LKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSNNLVK 70
L L+IL + N ++S S +L EL VSYN++ L + L K
Sbjct: 259 LTSLKILDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYLP-------TGIGQEMARLEK 311
Query: 71 EWSEFNKLQDLPN 83
W NKL+ LP+
Sbjct: 312 LWVHLNKLRSLPS 324
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 14 LRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRN---LRVLYMSNNLVK 70
L + L N + S G+E L ++ L +S+N KL G L N L+ LY++ N +
Sbjct: 251 LEFVYLRDNRLSSLEGIEILKG-VKVLDLSFNEF-KLPGFEPLENCKLLQQLYLAGNQI- 307
Query: 71 EWSEFNKLQDLPNLDDLLFVGNPLYDAC 98
+ L +LPNL+ L N L C
Sbjct: 308 --TSLATLPELPNLEFLSVAQNRLKSLC 333
>04_04_1072 - 30587344-30588034,30589866-30590035,30590682-30590879
Length = 352
Score = 29.5 bits (63), Expect = 3.2
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKG-----VHVLRNLRVL 62
+ L KL++L++ N ++S LEEL ++N + KL +H LR L V
Sbjct: 96 IGCLSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKLSV- 154
Query: 63 YMSNNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACE 99
SN L + S + + L LD L L D E
Sbjct: 155 -NSNKLAQLPSSTSHMTALRALDARLNCLRALPDGLE 190
>04_04_0763 -
27854600-27854668,27854766-27855140,27855227-27855901,
27857181-27857219,27859019-27859075,27859629-27859725,
27859978-27860232,27862801-27862937
Length = 567
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 111 LPNLKKLDGETVLREDDPPLTVANMQIKRIYTSSEQQHLDRRSTE 155
+P++ K+D ++L E L V ++K + +SSE H +R+TE
Sbjct: 415 VPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPSH--QRATE 457
>03_06_0011 - 30995083-30995108,30995850-30996038,30996063-30998856
Length = 1002
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGD--TLEELWVSYNLIEKLKGVHV--LRNLRVLY 63
L SL KL++L L RN + E LGD L L + NL+E + LR L+VL
Sbjct: 193 LGSLPKLKLLDLSRNLLTGRIPSE-LGDCRELRSLQLFSNLLEGSIPPEIGRLRRLQVLD 251
Query: 64 MSNN 67
+S+N
Sbjct: 252 ISSN 255
>12_02_0685 + 22044167-22045228,22045319-22045504,22045630-22045947
Length = 521
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 135 MQIKRIYTSSEQQ---HLDRRSTEQCHPLGGRFSFRRHINLQTGDLRRNNHNLLIHHQRI 191
MQ++++ + E + L S+ Q P GG S N+ TGD R+ + Q
Sbjct: 315 MQMQQMDNNGEAETAHSLSLSSSSQRRPRGGVLSLNLETNVMTGDSTRSFEQEIFRFQVT 374
Query: 192 KNFGYHNPRILADKSTSLTVVPQQASIAADSPRFLVL 228
NF + A +V I + R VL
Sbjct: 375 DNFSVLELDLKAQGHVYGAIVLHLLGICTSTQRLRVL 411
>12_02_0390 -
18510095-18510148,18510318-18512450,18513018-18513681,
18514089-18514202,18514835-18514979,18515274-18515331
Length = 1055
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 5 VTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKL-KGVHVLRNLRVLY 63
VTGL S L+ L L RN++K+F L L +S N I+ L + + L L L
Sbjct: 655 VTGLCSFISLQYLDLSRNWLKTFPTEVCNLMNLYYLNLSDNKIKYLPEELGSLFKLEYLL 714
Query: 64 MSNNLVKEWSE 74
+ +N ++E E
Sbjct: 715 LRSNPIREMPE 725
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 8 LNSLKKLRILSLGRNYIKSFAGMESLGDT--LEELWVSYNLIEKL--KGVHVLRNLRVLY 63
++ L++L +L L N + S+G+ + EL + N++ K + +L NL++L
Sbjct: 130 ISELQRLTMLDLSYNNLTGHIPA-SVGNLTMITELSIHRNMVSGPIPKEIGMLANLQLLQ 188
Query: 64 MSNNLVKEWSEFNKLQDLPNLDDLLFVGNPL 94
+SNN + L +L NLD GN L
Sbjct: 189 LSNNTLSGEIP-TTLANLTNLDTFYLDGNEL 218
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 101 DTWRSEAARRLPNLKKLDGETVLREDDPPLTVANMQIKRIYTSSEQ 146
DT R EAA +LKKL+ E +DDP L ++ +K++ T SE+
Sbjct: 643 DTLR-EAAFGYQDLKKLESEVSNYKDDPRLP-CDIALKKMVTISEK 686
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 187 HHQRIKNFGYHNPRILADKSTSLTVVPQQASIAADSPRFLVLRHAPTLPH 236
HHQ FG HNP+I ++ A++P+ + PT+ H
Sbjct: 685 HHQAPLQFGGHNPQIPPQGVVPSSLQMSMGLHGANAPQVAQQMYIPTIQH 734
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 168 RHINLQTGDLRRNNHNLLIHHQRIKNFGYHNPRILADKSTSLTVVPQQASIA 219
RH+ +Q +++NN L+HHQ +KN +L KS L VP A+ A
Sbjct: 130 RHLQVQL--IKQNN---LVHHQTLKNEISSPISVLERKSGELHKVPLHAATA 176
>01_06_0589 -
30446684-30446790,30446977-30447187,30447316-30447399,
30447550-30448593
Length = 481
Score = 28.7 bits (61), Expect = 5.7
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 49 KLKGVHVLRNLRVLYMSNNLVKEWSEFNKLQDL-----PNLDDLLFVGNPLYDACELDTW 103
KLK + L + V S NLV+ + +F+ L++L PNL++L+ +G PL A ++
Sbjct: 266 KLKNITGLDKICV--RSRNLVRLFGDFSYLKELVVEDAPNLEELVGIGLPL-AAAKVKIV 322
Query: 104 RSEAARRLPNLKKLDGETVLRED--DPPL-----TVANMQIKRIYTSSEQQHLDRRSTEQ 156
+ R L L K V+ + D P T+ Q+ + + E H++ S
Sbjct: 323 FAPKLRVLGYLGKSVRPLVIYDTVFDVPFSEKGHTIFVAQLLKCFPCLEALHIEPDSRSI 382
Query: 157 CHPL 160
C P+
Sbjct: 383 CRPV 386
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 8 LNSLKKLRI-LSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYMSN 66
L +K+++ L + ++I++ G +LGD L+E W++ + +L + + LY ++
Sbjct: 40 LEKIKQIQEQLDITNDFIQNHIGTANLGDPLDESWIA--TVRRLAFIVEDVMEKYLYYAH 97
Query: 67 NLVKEWSEFNKLQDLPNLDDLLFVG 91
L +E S+ + ++ +D VG
Sbjct: 98 QLQEEGSQKHPVKRSSYVDVFKKVG 122
>11_06_0703 + 26444128-26446215,26446525-26447226
Length = 929
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 2 IEKVTGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHVLR 57
+E+VT L ++KL + + + + +E LG +LE+LW+ N+ + VH LR
Sbjct: 866 LERVTELPKVRKLFV-----SVCPNLSCVEELG-SLEQLWLDVNMEDSSPWVHGLR 915
>04_01_0063 - 630345-633743
Length = 1132
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Query: 11 LKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHV 55
LKKLR L L I +F G LG T+EEL ++KL+ VHV
Sbjct: 517 LKKLRTLIL----ITTFGG---LGITIEELEAMLKKLKKLRVVHV 554
>01_05_0740 -
24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 28.3 bits (60), Expect = 7.5
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 54 HVLRNLRVLYMSNNLVKEWSEFNKLQDL---PNLDDLLFVGNPLYDACELDTWRSEAARR 110
H+ +++ LY N + ++ KL++ ++D + + D L W E A
Sbjct: 556 HLFEDVKHLYHMNGTLAGYNILQKLEEKWRSNQMEDHHSNASKIDDTFSLMAWEEERADE 615
Query: 111 LPNLKK-LDGETVLREDDPPLTVAN-MQIKRIYTSSEQQH 148
+ N+KK L+ E +E L V+ + I ++ SEQ H
Sbjct: 616 IANIKKRLEEEEFWKEH---LQVSGWIDIMQLKERSEQPH 652
>11_01_0461 + 3569700-3572373,3572477-3572847
Length = 1014
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 7 GLNSLKKLRILSLGRNYIKSFAGMESLG-DTLEELWVSYNLIEKLKGVHV--LRNLRVLY 63
GL SLK L++LS+ N + E T+ E+W+ N ++ + + + L L
Sbjct: 459 GLESLKVLQVLSIPNNNLHGSIPRELFSIPTIREIWLYSNRLDGPLPIEIGNAKQLEHLV 518
Query: 64 MSNN 67
+S+N
Sbjct: 519 LSSN 522
>04_01_0112 +
1151242-1151272,1151722-1151928,1151996-1152318,
1152552-1153793
Length = 600
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 7 GLNSLKKLRILSLGRNYI--KSFAGMESLGDTLEELWVSYNLIEKLKGVHVLRNLRVLYM 64
G + +KL LSL N + + A + TL EL++ N + + L +LRV+ +
Sbjct: 11 GERAFQKLSKLSLSHNSLTNEGVAALVINRTTLSELYLGGNQLLTTSWISNLTSLRVVDL 70
Query: 65 SNNLVKEWSEFNKLQDLPNL 84
S N + ++ L L L
Sbjct: 71 SQNFLHGYNGICNLHQLEYL 90
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 27.9 bits (59), Expect = 9.9
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 6 TGLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKL-KGVHVLRNLRVLYM 64
+ ++ L L+ L L R + F L L +S N + + +G+ L +L L +
Sbjct: 491 SAVSKLPHLKELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDL 550
Query: 65 S-NNLVKEWSEFNKLQDLPNLDDLLFVGNPLYDACELDTWRSEAARRLPNLKKLDGETVL 123
S NN+ E L+ PNL L GNPL ++ W A P+L + G+ L
Sbjct: 551 SDNNITTLPPELGLLE--PNLQVLKLDGNPLRRVIDVKCWYLNANGLTPSL--VPGKDRL 606
Query: 124 REDDPPLTVANMQIKRIYTS 143
D P V N+ ++R+ TS
Sbjct: 607 -NDLPDDVVLNI-LERLDTS 624
>02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732
Length = 1050
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 7 GLNSLKKLRILSLGRNYIKSFAGMESLGDTLEELWVSYNLIEKLKGVHV 55
GL SL KLR L L N++ S E +L+ L VS NL G H+
Sbjct: 145 GLTSLTKLRFLVLSNNFLSSSIPKEIC--SLKRL-VSLNLSSNQLGGHI 190
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,104,676
Number of Sequences: 37544
Number of extensions: 327429
Number of successful extensions: 922
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 903
Number of HSP's gapped (non-prelim): 42
length of query: 286
length of database: 14,793,348
effective HSP length: 81
effective length of query: 205
effective length of database: 11,752,284
effective search space: 2409218220
effective search space used: 2409218220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -