GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001687-TA|BGIBMGA001687-PA|undefined
         (91 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    21   5.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    21   5.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   9.3  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
          phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 48 LPQAGSDEEFRYLSDI 63
          LPQ   DE F YLS +
Sbjct: 60 LPQGIEDEFFEYLSQL 75


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 21  LKYGM----FTKKNVNRSTNAFANYMRQIEELPQAGSDEEFR 58
           LKY M     +KKN+N       ++ R+++++    S+ E R
Sbjct: 725 LKYSMNDLETSKKNINEYDRQLEDFTRELDQIGPKISEIERR 766


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 12  SIPDPTLPHLKY 23
           SIPDPT+  L Y
Sbjct: 309 SIPDPTVGPLSY 320


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.126    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,050
Number of Sequences: 2123
Number of extensions: 3196
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 91
length of database: 516,269
effective HSP length: 54
effective length of query: 37
effective length of database: 401,627
effective search space: 14860199
effective search space used: 14860199
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)