Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001686-TA|BGIBMGA001686-PA|undefined
(359 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex |... 48 3e-06
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.009
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 33 0.082
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 32 0.14
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.14
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.19
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 31 0.19
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 31 0.33
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 30 0.58
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 29 0.77
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 29 1.0
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.0
SPBC23G7.07c |||replication regulator |Schizosaccharomyces pombe... 29 1.3
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 28 1.8
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 3.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 27 3.1
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 27 4.1
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 27 4.1
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 27 4.1
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 27 4.1
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 7.1
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 26 7.1
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 26 7.1
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 7.1
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 26 9.4
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 26 9.4
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 26 9.4
>SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 47.6 bits (108), Expect = 3e-06
Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 71 KTIIMARNKKTGKVRIIEVGTVDLKPYLKVDLDNSQLMET-SNLDLSRKFGSKKHKKIME 129
K I+ A+ T + I+ + D K + +ME +NL L+ FG++K +K +
Sbjct: 102 KKIVPAKYLNTFERNILALQEKDKFLKKKHGTVSGTVMEQRANLGLA--FGTRKSQKAIM 159
Query: 130 QREKLKVNVQTVTDQMQNVSQNISE------DQLDLSNYNKTDENFYVPPIDREAKSVEQ 183
+ +V +T+ D + N+ + Q D++ D +PP++ A+S+E
Sbjct: 160 EESANRVKAETLGDVKDQLVSNVQKATEALPTQEDIAAAQAQDRP--IPPVNVGAESIED 217
Query: 184 VYDLDKILTEDMFEKVYEE--MENTD---------YMSN--FNEFLKTIVSENMPKKHLV 230
Y L+ I+ ++ F +Y + +EN D Y + NE + ++S +
Sbjct: 218 AYKLEDIIPKEEFSAIYIKPLLENPDERNWAKLLPYRHSLFINERFQRLLSIEEVDQKRA 277
Query: 231 LALYANSLLNMYGTLMKDI----TKKTYVACPHSASLNDHILKNFLSISNNRKLRTPQMK 286
LY SLL + + + T + +A P L D ++K F + ++ +
Sbjct: 278 RILYYISLLQAFLFSRRSVGNRETLRKKLADPPEI-LIDGLIKRFTQTTGIGSVQVSSRE 336
Query: 287 -DKSLCHALVFVLLINKYKFNLEDLCKQL 314
DK +C+ LV L+++ Y ++ L L
Sbjct: 337 VDKIICYILVLCLIVDNYSTDVLTLANDL 365
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.9 bits (79), Expect = 0.009
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 125 KKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNK-----TDEN----FYVPPID 175
KK+ E ++L+ N QT+T Q+++ S + + QL+ +N+ + +DEN + ++
Sbjct: 612 KKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLE 671
Query: 176 REAKS-VEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEF-LKTI--VSENMPKKHLVL 231
KS +++ D+D + E + + E++ ++ F++ K + V +N+ KH L
Sbjct: 672 ESNKSLIKKQEDVDSL--EKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETL 729
Query: 232 ALYANSL 238
N L
Sbjct: 730 EAQRNDL 736
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 32.7 bits (71), Expect = 0.082
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 125 KKIMEQR-EKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDREAKSVEQ 183
K + + R E+L+ + +TD +Q + E +LDL K +E+ E + VE+
Sbjct: 537 KNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKKNEDL----SKLEVEKVEE 592
Query: 184 VYDLDKILT-----EDMFEKVYEEMENTDYMSNFNE 214
+ +L K LT ++ K +E N D E
Sbjct: 593 IANLKKELTHLAKQQEFGFKYVQEFSNEDLQGKLIE 628
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 31.9 bits (69), Expect = 0.14
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 63 AEEQEELGKTIIMARNKKTGKVRIIEVGTVDLKPY-LKVDLDNSQLMETSNLDLSRKFGS 121
A+E EE ++ + RII+ D P L D S + NL +K +
Sbjct: 295 AQEAEERKNVLLNFDRTSAQRTRIIDEAA-DFDPTSLASDTWASPAEKALNLVRMQKAMA 353
Query: 122 KKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTD 166
KK KK + + V DQ + S++ EDQ +L N K +
Sbjct: 354 KKEKKKKKVLSISLSGKKVVVDQKEASSESSDEDQDELDNLTKVE 398
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.14
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 28 YITDNFKDTECT----ILRDEITSKRNVALEVCDTLYVGAEEQEELGKTIIMARNKKTGK 83
Y++ N KD + T IL D+I+ + +V D L V EE+EE I+A K +
Sbjct: 644 YLSGNAKDLDNTNLMEILNDKISVLQRQLTDVKDELDVSEEEREE----AIVAGQKLSAS 699
Query: 84 VRII--EVGTVDLK-PYLKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQT 140
++ E ++LK LK +L N+Q + LD + S+ KK+ E+R K+ +
Sbjct: 700 FELMSNEKQALELKYSSLKNELINAQNL----LDRREEELSELSKKLFEER---KIRSGS 752
Query: 141 VTDQMQNVSQNISEDQL 157
D +N N+ +L
Sbjct: 753 NDDIEKNKEINVLNSEL 769
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.5 bits (68), Expect = 0.19
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 42 RDEITSKRNVALEVCDTLYVGAEEQEELGKTIIMARNKKTGKVRIIEVGTVDLKPYLKVD 101
++E++S + E+ D L EE E++ + NK G + E+ + KV
Sbjct: 1452 KEELSSTQRKLSEIMDILNTTKEELEKVRQN----SNKSEGTSKDTEIPNEEEMERKKV- 1506
Query: 102 LDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSN 161
+ L S + + K+ ++++K +TV + S ++ D DL N
Sbjct: 1507 MQQEVLRLRSRIAKELQKNELLRKQNQVLQDQVKALQETVVSSEEAESASVHADTKDLEN 1566
Query: 162 YNKTDE 167
KT+E
Sbjct: 1567 LKKTEE 1572
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 31.5 bits (68), Expect = 0.19
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 23/200 (11%)
Query: 104 NSQLMETSNL-DLSRKFGSK--KHKKIMEQREKLKVNVQTVTDQM-------QNVSQNIS 153
N+QL + NL + RK K +H+ ++ + + ++ D+ Q + + I
Sbjct: 637 NAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKERDEKLIPIHEWQQLQERIE 696
Query: 154 EDQLDLSNYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENT-DYMSNF 212
L L K E F A +E+ D+ K E + V + EN+ +NF
Sbjct: 697 HQTLLLRQREKVPEQF--------AAEIEKNEDIRKENFEALMNSVLKVKENSIKATNNF 748
Query: 213 NEFL----KTIVSENMPKKHLVLALYANSLLNMYGTLMKDITKKTYVACPHSASLNDHIL 268
+ L I ++ +KH + A N+ L +KDIT K A + SL ++
Sbjct: 749 EKMLGSRLNVIEAKYKLEKHEMDANQVNARLTEVQDRLKDITDKLASAREDAMSLYGSVV 808
Query: 269 KNFLSISNNRKLRTPQMKDK 288
+ + S++R+ ++ ++
Sbjct: 809 DSLQTQSSDRQTAITELNEE 828
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 30.7 bits (66), Expect = 0.33
Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 41 LRDEITSKRNVALEVCDTLYVGAEEQEELGKTIIMARNKKTGKVRIIEVGTVDLKPYLKV 100
L D I ++ L + +V E++E K A +K K+ E+ + + K ++
Sbjct: 97 LNDPIVQEK--ILRAFEQGHVDEEDEERCRKMASDASEEKDRKIEEGELTSEEEKEPIQ- 153
Query: 101 DLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLS 160
DL S + +++ S +KKHK ++ K+ + +++++V+ + E++ S
Sbjct: 154 DLRKSH--KRKSVEKS-SVPNKKHKAERKRSPSPKIEILEDDEEIEDVASDKDEEEKPWS 210
Query: 161 NYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENT------DYMSNFNE 214
+ D+ V + E + V + + + K+Y NT DY + NE
Sbjct: 211 GDEEDDDELVVKDSEDETEGVSTIAS-QRPRRSARYVKLYGSTTNTSKRRKVDYAESGNE 269
Query: 215 F 215
+
Sbjct: 270 Y 270
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 29.9 bits (64), Expect = 0.58
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 98 LKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQL 157
L+++L++ +L E L KH E+ E+L V ++ D+ +N QN E Q
Sbjct: 385 LRIELED-KLAEIDMLRNKLLKEEHKHHSTSEKLEELSKYVASIQDKERNNGQNALELQA 443
Query: 158 DLSNYNKTDENFY 170
+ + +E+ Y
Sbjct: 444 RIQQLERRNEDMY 456
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 29.5 bits (63), Expect = 0.77
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 180 SVEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEFLKT 218
+V+ +++ + T D E+ YE+ TD + NF E +KT
Sbjct: 733 TVKNIFEAVRKCTFDTLEEEYEKTVATDILRNFAESIKT 771
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 118 KFGSKKHKKIMEQREKLKVNVQTV-TDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDR 176
+ GS++ K V++ + D + ++ N++E ++ S+ N+T E F I R
Sbjct: 10 QIGSRRQPTYFRCFHKTTVHLNSFKNDPKKELNSNLNEKSVEESSKNETKEQFNSSSIPR 69
Query: 177 EAKS 180
E++S
Sbjct: 70 ESES 73
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 1.0
Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 21 IFNFQNGYITDNFKDTECTILRDEITSKRNVALEVCDTLYVGAEEQ-EELGKTIIMARNK 79
I N N K +EC+ +T + + L TL + + EL + I + R
Sbjct: 841 ILELSNDLRVANSKLSECSDDVRRLTLQNSFDLREHQTLVLQLQSNITELKQDITLQRTV 900
Query: 80 KTGKVRIIEVGTVDLKPYLKVDLDNSQLMET----SNLDLSRKFGSKKHKKIMEQREKLK 135
+ +E+ T +LK LK + + +++ +N D ++ + + + I + E+ K
Sbjct: 901 RNQ----LEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVEVEAISIELERTK 956
Query: 136 VNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENF 169
++ + N+ Q + L N+T E F
Sbjct: 957 EKLRMAELEKSNIQQKYLASEKTLEMMNETHEQF 990
>SPBC23G7.07c |||replication regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 277
Score = 28.7 bits (61), Expect = 1.3
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 110 TSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSN-YNKTDEN 168
T N S+ S K +K +QR+K K + ++Q+ + +I + LS+ N ++
Sbjct: 39 TENFTASQNNDSAKREKRKKQRQKQKERKRAKLLELQDTNASIIQSPDTLSDLLNNYIKS 98
Query: 169 FYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEFLKTIVSENMPKKH 228
Y D E ++V I F K +Y+ + F K +V + P +
Sbjct: 99 IYSDLTDVELS--DKVIKASYIEDTISFSKPKTVDNYPEYIQHLPGFTKKVVQNSNP-EI 155
Query: 229 LVLALYA 235
LVL + A
Sbjct: 156 LVLCISA 162
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 137 NVQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMF 196
N + T+Q++ + ++D S NK D+N R +S++ Y+L + D+
Sbjct: 55 NTTSFTEQIETSETSKTQD----SEGNKVDKNLKENKSIRRKRSIDNDYELSNVKRNDIT 110
Query: 197 EKVYEEMEN 205
E EN
Sbjct: 111 SGKNREFEN 119
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.5 bits (58), Expect = 3.1
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 139 QTVTDQMQNVSQNISEDQLD-LSNYNKTDENFYVPPIDREAKSVEQVYDLDKIL----TE 193
+T+ D ++ S N ED+ D + +K D+N V S++ VY++ +I TE
Sbjct: 1697 ETLHDAARSDSNNSMEDEEDDVDEEDKEDKNRTVMRSIESGDSIQDVYNVSRIFGLEATE 1756
Query: 194 D--MFEKVYEEMENTDYMSNFNEFLKTIVSENMPKKHLVLALYANSLLNMYGTLMKDITK 251
+ K Y + + ++ + NE + + + ++ L L L+ G + + I+K
Sbjct: 1757 GILLLGKQYLYLMDNFFLRSDNEIVDVNDNSIIDERDPYLQLLHLQSLSSSGKVRRHISK 1816
Query: 252 K 252
+
Sbjct: 1817 E 1817
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/90 (18%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 71 KTIIMARNKKTGKVRIIEVGTVDLKPYLKVDLDNSQLMETSN-LDLSRKFGSKKHKKIME 129
+ + + R ++ ++ + E+ + +K +++ ++ T LDLS K S + +K+ E
Sbjct: 579 RDVFINRLQRLRRMNLYEITFLSMKQKMQLKSLREEIDNTKEALDLSVKERSIQEEKLNE 638
Query: 130 QREKLKVNVQTVTDQMQNVSQNISEDQLDL 159
+ K N++ T + + + ++Q L
Sbjct: 639 SLKTSKTNLEEQTQLAEKYHEELLDNQQKL 668
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 27.1 bits (57), Expect = 4.1
Identities = 22/110 (20%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 120 GSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVP--PIDRE 177
GS ++KK + EK K ++++ + + N + +++ +YN D+ P P++
Sbjct: 394 GSAQNKKSGDNSEKTKNSLKSSSKKSANTGSGQGKTKVEYVSYNSVDKGNSSPFKPLELN 453
Query: 178 AKSVEQV-YDLDKILTEDMFE----KVYEEMENTDYMSNFNEFLKTIVSE 222
++ ++D + +E++ E K +EE + + E+++ + SE
Sbjct: 454 VVGEKKANAEVDSLPSENVQESEDDKAFEENRRLRNLGSV-EYIRIMSSE 502
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 99 KVDLDNSQLMETSNLDLSRKFGS-----KKHKKIME--QREKLKVNVQTVTDQMQ 146
++DL+++ ++ T N L RKF + K+H K M Q EK+ + V+ +T M+
Sbjct: 477 QLDLESTLVVMTQNEKLKRKFSTEIELIKQHTKPMNTCQLEKVPMYVKALTSLMK 531
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 113 LDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQN 151
+D SRK +KKI + K+ VQ + MQ +Q+
Sbjct: 86 VDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQS 124
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 27.1 bits (57), Expect = 4.1
Identities = 20/96 (20%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 78 NKKTGKVRII-EVGTVDLKPYLKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKV 136
N+ +RI ++ T+ + P+ K+ +D+SQ ++TS L+ + S + K ++ K
Sbjct: 88 NQGKQHIRIAKDLETLIIAPFSKMSIDHSQKLQTSQQVLTNQIKSYEKKYYTLKKTKSAY 147
Query: 137 -----NVQTVTDQMQNVSQNISEDQLDLSNYNKTDE 167
N++ ++ + ++ SE DL+ + +
Sbjct: 148 YNKCRNLEDYEEESKESNETTSEAITDLTTVSSPQQ 183
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 26.2 bits (55), Expect = 7.1
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 19/188 (10%)
Query: 41 LRDEITSKRNVALEVCDTLYVGAEEQEELGKTI------IMARNKKTGKVRIIEVGTVDL 94
+R++ + VAL C + AE+ +L I I A ++K G R E L
Sbjct: 437 IREQAAASSEVALAACSGIKHNAEQVNKLNALIQKVYSYITAESEKVGN-RYGET----L 491
Query: 95 KPYLKVDLDNSQLMETSNLD-LSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNIS 153
+K L + +S + L+ S K K + +L V+DQ+ + + I+
Sbjct: 492 DNVIKQHLSRIGSVASSAVQRLTAVKNSHKLKMVDRSSAELPNFDYLVSDQVHKIVE-IN 550
Query: 154 EDQLDLSNYNKTDENF--YVPPIDRE-AKSVEQVYDLDKILTEDMFEKVYEEMENTDYMS 210
++ D + N + +F Y I A S ++ D +L ED ++++ ++ N+D
Sbjct: 551 DEHADCDDVNFSTASFEIYERSIPTHGADSERKILKRDSLLNED--DEIFNDL-NSDKTI 607
Query: 211 NFNEFLKT 218
N+ T
Sbjct: 608 KTNQATST 615
>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 7.1
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 138 VQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMFE 197
V + + + +N E DL + T N ++ + + K + + L + +
Sbjct: 193 VSVICELARRAPKNYLEFAPDLFHLLTTSSNNWM--LIKLIKLFASLTPYEPRLVKKLIP 250
Query: 198 KVYEEMENTDYMSNFNEFLKTIVSENMPKKH 228
+ + +ENT MS E + TIVS NM H
Sbjct: 251 SLTDIIENTHAMSLLYECINTIVSGNMLVGH 281
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/56 (19%), Positives = 26/56 (46%)
Query: 167 ENFYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEFLKTIVSE 222
++ YV ++R + + EQ+ LD+ L + +++ N + LK + +
Sbjct: 214 DSSYVKALNRRSAAYEQLGKLDEALMDSTVSCIFDGFANESMTATVERLLKKVAEK 269
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 127 IMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENF 169
++E +++ N T+ D + V + +SEDQ D++ Y +NF
Sbjct: 328 LLEWSQEVTSN-STLYDIIHKVFEKLSEDQNDIAPYPNPYQNF 369
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 113 LDLSRKFGSKKHK--KIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSN 161
L+ +K KH +M ++ KL V +T+Q + + +SE Q+ L++
Sbjct: 908 LNSQQKLYDLKHSYSSVMTEKSKLSDQVNDLTEQAKITQRKLSEVQIALAD 958
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 88 EVGTVDLKPYLKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQN 147
EV PY D + ++ ++ LS++ S++ K+ Q+EK + V+ Q +
Sbjct: 73 EVALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFAD 132
Query: 148 VSQNIS 153
+ + +S
Sbjct: 133 LKRGLS 138
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 99 KVDLDNSQLME--TSNLDLSRKFGSKKHKKIMEQREK 133
+V LDN L + +D+ R++ + HK M +EK
Sbjct: 32 QVRLDNDMLSQWIRERMDIERQYSDQLHKLAMNMQEK 68
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,659,954
Number of Sequences: 5004
Number of extensions: 72084
Number of successful extensions: 296
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 272
Number of HSP's gapped (non-prelim): 37
length of query: 359
length of database: 2,362,478
effective HSP length: 74
effective length of query: 285
effective length of database: 1,992,182
effective search space: 567771870
effective search space used: 567771870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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