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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001686-TA|BGIBMGA001686-PA|undefined
         (359 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex |...    48   3e-06
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce...    36   0.009
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc...    33   0.082
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr...    32   0.14 
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch...    32   0.14 
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces...    31   0.19 
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo...    31   0.19 
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy...    31   0.33 
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S...    30   0.58 
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom...    29   0.77 
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S...    29   1.0  
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch...    29   1.0  
SPBC23G7.07c |||replication regulator |Schizosaccharomyces pombe...    29   1.3  
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr...    28   1.8  
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch...    27   3.1  
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ...    27   3.1  
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce...    27   4.1  
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat...    27   4.1  
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy...    27   4.1  
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |...    27   4.1  
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    26   7.1  
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch...    26   7.1  
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi...    26   7.1  
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    26   7.1  
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom...    26   9.4  
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|...    26   9.4  
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce...    26   9.4  

>SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 425

 Score = 47.6 bits (108), Expect = 3e-06
 Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 30/269 (11%)

Query: 71  KTIIMARNKKTGKVRIIEVGTVDLKPYLKVDLDNSQLMET-SNLDLSRKFGSKKHKKIME 129
           K I+ A+   T +  I+ +   D     K    +  +ME  +NL L+  FG++K +K + 
Sbjct: 102 KKIVPAKYLNTFERNILALQEKDKFLKKKHGTVSGTVMEQRANLGLA--FGTRKSQKAIM 159

Query: 130 QREKLKVNVQTVTDQMQNVSQNISE------DQLDLSNYNKTDENFYVPPIDREAKSVEQ 183
           +    +V  +T+ D    +  N+ +       Q D++     D    +PP++  A+S+E 
Sbjct: 160 EESANRVKAETLGDVKDQLVSNVQKATEALPTQEDIAAAQAQDRP--IPPVNVGAESIED 217

Query: 184 VYDLDKILTEDMFEKVYEE--MENTD---------YMSN--FNEFLKTIVSENMPKKHLV 230
            Y L+ I+ ++ F  +Y +  +EN D         Y  +   NE  + ++S     +   
Sbjct: 218 AYKLEDIIPKEEFSAIYIKPLLENPDERNWAKLLPYRHSLFINERFQRLLSIEEVDQKRA 277

Query: 231 LALYANSLLNMYGTLMKDI----TKKTYVACPHSASLNDHILKNFLSISNNRKLRTPQMK 286
             LY  SLL  +    + +    T +  +A P    L D ++K F   +    ++    +
Sbjct: 278 RILYYISLLQAFLFSRRSVGNRETLRKKLADPPEI-LIDGLIKRFTQTTGIGSVQVSSRE 336

Query: 287 -DKSLCHALVFVLLINKYKFNLEDLCKQL 314
            DK +C+ LV  L+++ Y  ++  L   L
Sbjct: 337 VDKIICYILVLCLIVDNYSTDVLTLANDL 365


>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1957

 Score = 35.9 bits (79), Expect = 0.009
 Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 15/127 (11%)

Query: 125 KKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNK-----TDEN----FYVPPID 175
           KK+ E  ++L+ N QT+T Q+++ S  + + QL+ +N+ +     +DEN      +  ++
Sbjct: 612 KKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLE 671

Query: 176 REAKS-VEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEF-LKTI--VSENMPKKHLVL 231
              KS +++  D+D +  E   + + E++  ++    F++   K +  V +N+  KH  L
Sbjct: 672 ESNKSLIKKQEDVDSL--EKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETL 729

Query: 232 ALYANSL 238
               N L
Sbjct: 730 EAQRNDL 736


>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 735

 Score = 32.7 bits (71), Expect = 0.082
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 10/96 (10%)

Query: 125 KKIMEQR-EKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDREAKSVEQ 183
           K + + R E+L+  +  +TD +Q     + E +LDL    K +E+        E + VE+
Sbjct: 537 KNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKKNEDL----SKLEVEKVEE 592

Query: 184 VYDLDKILT-----EDMFEKVYEEMENTDYMSNFNE 214
           + +L K LT     ++   K  +E  N D      E
Sbjct: 593 IANLKKELTHLAKQQEFGFKYVQEFSNEDLQGKLIE 628


>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
           protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 455

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 63  AEEQEELGKTIIMARNKKTGKVRIIEVGTVDLKPY-LKVDLDNSQLMETSNLDLSRKFGS 121
           A+E EE    ++        + RII+    D  P  L  D   S   +  NL   +K  +
Sbjct: 295 AQEAEERKNVLLNFDRTSAQRTRIIDEAA-DFDPTSLASDTWASPAEKALNLVRMQKAMA 353

Query: 122 KKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTD 166
           KK KK  +         + V DQ +  S++  EDQ +L N  K +
Sbjct: 354 KKEKKKKKVLSISLSGKKVVVDQKEASSESSDEDQDELDNLTKVE 398


>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1208

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)

Query: 28  YITDNFKDTECT----ILRDEITSKRNVALEVCDTLYVGAEEQEELGKTIIMARNKKTGK 83
           Y++ N KD + T    IL D+I+  +    +V D L V  EE+EE     I+A  K +  
Sbjct: 644 YLSGNAKDLDNTNLMEILNDKISVLQRQLTDVKDELDVSEEEREE----AIVAGQKLSAS 699

Query: 84  VRII--EVGTVDLK-PYLKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQT 140
             ++  E   ++LK   LK +L N+Q +    LD   +  S+  KK+ E+R   K+   +
Sbjct: 700 FELMSNEKQALELKYSSLKNELINAQNL----LDRREEELSELSKKLFEER---KIRSGS 752

Query: 141 VTDQMQNVSQNISEDQL 157
             D  +N   N+   +L
Sbjct: 753 NDDIEKNKEINVLNSEL 769


>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1727

 Score = 31.5 bits (68), Expect = 0.19
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 42   RDEITSKRNVALEVCDTLYVGAEEQEELGKTIIMARNKKTGKVRIIEVGTVDLKPYLKVD 101
            ++E++S +    E+ D L    EE E++ +      NK  G  +  E+   +     KV 
Sbjct: 1452 KEELSSTQRKLSEIMDILNTTKEELEKVRQN----SNKSEGTSKDTEIPNEEEMERKKV- 1506

Query: 102  LDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSN 161
            +    L   S +    +      K+    ++++K   +TV    +  S ++  D  DL N
Sbjct: 1507 MQQEVLRLRSRIAKELQKNELLRKQNQVLQDQVKALQETVVSSEEAESASVHADTKDLEN 1566

Query: 162  YNKTDE 167
              KT+E
Sbjct: 1567 LKKTEE 1572


>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1065

 Score = 31.5 bits (68), Expect = 0.19
 Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 23/200 (11%)

Query: 104 NSQLMETSNL-DLSRKFGSK--KHKKIMEQREKLKVNVQTVTDQM-------QNVSQNIS 153
           N+QL +  NL +  RK   K  +H+ ++ +   +   ++   D+        Q + + I 
Sbjct: 637 NAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKERDEKLIPIHEWQQLQERIE 696

Query: 154 EDQLDLSNYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENT-DYMSNF 212
              L L    K  E F        A  +E+  D+ K   E +   V +  EN+    +NF
Sbjct: 697 HQTLLLRQREKVPEQF--------AAEIEKNEDIRKENFEALMNSVLKVKENSIKATNNF 748

Query: 213 NEFL----KTIVSENMPKKHLVLALYANSLLNMYGTLMKDITKKTYVACPHSASLNDHIL 268
            + L      I ++   +KH + A   N+ L      +KDIT K   A   + SL   ++
Sbjct: 749 EKMLGSRLNVIEAKYKLEKHEMDANQVNARLTEVQDRLKDITDKLASAREDAMSLYGSVV 808

Query: 269 KNFLSISNNRKLRTPQMKDK 288
            +  + S++R+    ++ ++
Sbjct: 809 DSLQTQSSDRQTAITELNEE 828


>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 274

 Score = 30.7 bits (66), Expect = 0.33
 Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 13/181 (7%)

Query: 41  LRDEITSKRNVALEVCDTLYVGAEEQEELGKTIIMARNKKTGKVRIIEVGTVDLKPYLKV 100
           L D I  ++   L   +  +V  E++E   K    A  +K  K+   E+ + + K  ++ 
Sbjct: 97  LNDPIVQEK--ILRAFEQGHVDEEDEERCRKMASDASEEKDRKIEEGELTSEEEKEPIQ- 153

Query: 101 DLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLS 160
           DL  S   +  +++ S    +KKHK   ++    K+ +    +++++V+ +  E++   S
Sbjct: 154 DLRKSH--KRKSVEKS-SVPNKKHKAERKRSPSPKIEILEDDEEIEDVASDKDEEEKPWS 210

Query: 161 NYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENT------DYMSNFNE 214
              + D+   V   + E + V  +    +      + K+Y    NT      DY  + NE
Sbjct: 211 GDEEDDDELVVKDSEDETEGVSTIAS-QRPRRSARYVKLYGSTTNTSKRRKVDYAESGNE 269

Query: 215 F 215
           +
Sbjct: 270 Y 270


>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
           Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 832

 Score = 29.9 bits (64), Expect = 0.58
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 98  LKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQL 157
           L+++L++ +L E   L         KH    E+ E+L   V ++ D+ +N  QN  E Q 
Sbjct: 385 LRIELED-KLAEIDMLRNKLLKEEHKHHSTSEKLEELSKYVASIQDKERNNGQNALELQA 443

Query: 158 DLSNYNKTDENFY 170
            +    + +E+ Y
Sbjct: 444 RIQQLERRNEDMY 456


>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1067

 Score = 29.5 bits (63), Expect = 0.77
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 180 SVEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEFLKT 218
           +V+ +++  +  T D  E+ YE+   TD + NF E +KT
Sbjct: 733 TVKNIFEAVRKCTFDTLEEEYEKTVATDILRNFAESIKT 771


>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
           S5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 387

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 118 KFGSKKHKKIMEQREKLKVNVQTV-TDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDR 176
           + GS++         K  V++ +   D  + ++ N++E  ++ S+ N+T E F    I R
Sbjct: 10  QIGSRRQPTYFRCFHKTTVHLNSFKNDPKKELNSNLNEKSVEESSKNETKEQFNSSSIPR 69

Query: 177 EAKS 180
           E++S
Sbjct: 70  ESES 73


>SPCC162.08c |nup211||nuclear pore complex associated
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1837

 Score = 29.1 bits (62), Expect = 1.0
 Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 9/154 (5%)

Query: 21  IFNFQNGYITDNFKDTECTILRDEITSKRNVALEVCDTLYVGAEEQ-EELGKTIIMARNK 79
           I    N     N K +EC+     +T + +  L    TL +  +    EL + I + R  
Sbjct: 841 ILELSNDLRVANSKLSECSDDVRRLTLQNSFDLREHQTLVLQLQSNITELKQDITLQRTV 900

Query: 80  KTGKVRIIEVGTVDLKPYLKVDLDNSQLMET----SNLDLSRKFGSKKHKKIMEQREKLK 135
           +      +E+ T +LK  LK   +  + +++    +N D ++   + + + I  + E+ K
Sbjct: 901 RNQ----LEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVEVEAISIELERTK 956

Query: 136 VNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENF 169
             ++    +  N+ Q     +  L   N+T E F
Sbjct: 957 EKLRMAELEKSNIQQKYLASEKTLEMMNETHEQF 990


>SPBC23G7.07c |||replication regulator |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 277

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 110 TSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSN-YNKTDEN 168
           T N   S+   S K +K  +QR+K K   +    ++Q+ + +I +    LS+  N   ++
Sbjct: 39  TENFTASQNNDSAKREKRKKQRQKQKERKRAKLLELQDTNASIIQSPDTLSDLLNNYIKS 98

Query: 169 FYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEFLKTIVSENMPKKH 228
            Y    D E    ++V     I     F K        +Y+ +   F K +V  + P + 
Sbjct: 99  IYSDLTDVELS--DKVIKASYIEDTISFSKPKTVDNYPEYIQHLPGFTKKVVQNSNP-EI 155

Query: 229 LVLALYA 235
           LVL + A
Sbjct: 156 LVLCISA 162


>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
           heterochromatin assembly Hrr1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1015

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 137 NVQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMF 196
           N  + T+Q++    + ++D    S  NK D+N       R  +S++  Y+L  +   D+ 
Sbjct: 55  NTTSFTEQIETSETSKTQD----SEGNKVDKNLKENKSIRRKRSIDNDYELSNVKRNDIT 110

Query: 197 EKVYEEMEN 205
                E EN
Sbjct: 111 SGKNREFEN 119


>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
            homolog|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2609

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 7/121 (5%)

Query: 139  QTVTDQMQNVSQNISEDQLD-LSNYNKTDENFYVPPIDREAKSVEQVYDLDKIL----TE 193
            +T+ D  ++ S N  ED+ D +   +K D+N  V        S++ VY++ +I     TE
Sbjct: 1697 ETLHDAARSDSNNSMEDEEDDVDEEDKEDKNRTVMRSIESGDSIQDVYNVSRIFGLEATE 1756

Query: 194  D--MFEKVYEEMENTDYMSNFNEFLKTIVSENMPKKHLVLALYANSLLNMYGTLMKDITK 251
               +  K Y  + +  ++ + NE +    +  + ++   L L     L+  G + + I+K
Sbjct: 1757 GILLLGKQYLYLMDNFFLRSDNEIVDVNDNSIIDERDPYLQLLHLQSLSSSGKVRRHISK 1816

Query: 252  K 252
            +
Sbjct: 1817 E 1817


>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1044

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 17/90 (18%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 71  KTIIMARNKKTGKVRIIEVGTVDLKPYLKVDLDNSQLMETSN-LDLSRKFGSKKHKKIME 129
           + + + R ++  ++ + E+  + +K  +++     ++  T   LDLS K  S + +K+ E
Sbjct: 579 RDVFINRLQRLRRMNLYEITFLSMKQKMQLKSLREEIDNTKEALDLSVKERSIQEEKLNE 638

Query: 130 QREKLKVNVQTVTDQMQNVSQNISEDQLDL 159
             +  K N++  T   +   + + ++Q  L
Sbjct: 639 SLKTSKTNLEEQTQLAEKYHEELLDNQQKL 668


>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 22/110 (20%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 120 GSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVP--PIDRE 177
           GS ++KK  +  EK K ++++ + +  N      + +++  +YN  D+    P  P++  
Sbjct: 394 GSAQNKKSGDNSEKTKNSLKSSSKKSANTGSGQGKTKVEYVSYNSVDKGNSSPFKPLELN 453

Query: 178 AKSVEQV-YDLDKILTEDMFE----KVYEEMENTDYMSNFNEFLKTIVSE 222
               ++   ++D + +E++ E    K +EE      + +  E+++ + SE
Sbjct: 454 VVGEKKANAEVDSLPSENVQESEDDKAFEENRRLRNLGSV-EYIRIMSSE 502


>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
           phosphatidyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 99  KVDLDNSQLMETSNLDLSRKFGS-----KKHKKIME--QREKLKVNVQTVTDQMQ 146
           ++DL+++ ++ T N  L RKF +     K+H K M   Q EK+ + V+ +T  M+
Sbjct: 477 QLDLESTLVVMTQNEKLKRKFSTEIELIKQHTKPMNTCQLEKVPMYVKALTSLMK 531


>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 245

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 113 LDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQN 151
           +D SRK     +KKI  +    K+ VQ +   MQ  +Q+
Sbjct: 86  VDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQS 124


>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 777

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 20/96 (20%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 78  NKKTGKVRII-EVGTVDLKPYLKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKV 136
           N+    +RI  ++ T+ + P+ K+ +D+SQ ++TS   L+ +  S + K    ++ K   
Sbjct: 88  NQGKQHIRIAKDLETLIIAPFSKMSIDHSQKLQTSQQVLTNQIKSYEKKYYTLKKTKSAY 147

Query: 137 -----NVQTVTDQMQNVSQNISEDQLDLSNYNKTDE 167
                N++   ++ +  ++  SE   DL+  +   +
Sbjct: 148 YNKCRNLEDYEEESKESNETTSEAITDLTTVSSPQQ 183


>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 841

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 41  LRDEITSKRNVALEVCDTLYVGAEEQEELGKTI------IMARNKKTGKVRIIEVGTVDL 94
           +R++  +   VAL  C  +   AE+  +L   I      I A ++K G  R  E     L
Sbjct: 437 IREQAAASSEVALAACSGIKHNAEQVNKLNALIQKVYSYITAESEKVGN-RYGET----L 491

Query: 95  KPYLKVDLDNSQLMETSNLD-LSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQNVSQNIS 153
              +K  L     + +S +  L+    S K K +     +L      V+DQ+  + + I+
Sbjct: 492 DNVIKQHLSRIGSVASSAVQRLTAVKNSHKLKMVDRSSAELPNFDYLVSDQVHKIVE-IN 550

Query: 154 EDQLDLSNYNKTDENF--YVPPIDRE-AKSVEQVYDLDKILTEDMFEKVYEEMENTDYMS 210
           ++  D  + N +  +F  Y   I    A S  ++   D +L ED  ++++ ++ N+D   
Sbjct: 551 DEHADCDDVNFSTASFEIYERSIPTHGADSERKILKRDSLLNED--DEIFNDL-NSDKTI 607

Query: 211 NFNEFLKT 218
             N+   T
Sbjct: 608 KTNQATST 615


>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 834

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 138 VQTVTDQMQNVSQNISEDQLDLSNYNKTDENFYVPPIDREAKSVEQVYDLDKILTEDMFE 197
           V  + +  +   +N  E   DL +   T  N ++  + +  K    +   +  L + +  
Sbjct: 193 VSVICELARRAPKNYLEFAPDLFHLLTTSSNNWM--LIKLIKLFASLTPYEPRLVKKLIP 250

Query: 198 KVYEEMENTDYMSNFNEFLKTIVSENMPKKH 228
            + + +ENT  MS   E + TIVS NM   H
Sbjct: 251 SLTDIIENTHAMSLLYECINTIVSGNMLVGH 281


>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
           Tom70|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 625

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 11/56 (19%), Positives = 26/56 (46%)

Query: 167 ENFYVPPIDREAKSVEQVYDLDKILTEDMFEKVYEEMENTDYMSNFNEFLKTIVSE 222
           ++ YV  ++R + + EQ+  LD+ L +     +++   N    +     LK +  +
Sbjct: 214 DSSYVKALNRRSAAYEQLGKLDEALMDSTVSCIFDGFANESMTATVERLLKKVAEK 269


>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 624

 Score = 26.2 bits (55), Expect = 7.1
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 127 IMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSNYNKTDENF 169
           ++E  +++  N  T+ D +  V + +SEDQ D++ Y    +NF
Sbjct: 328 LLEWSQEVTSN-STLYDIIHKVFEKLSEDQNDIAPYPNPYQNF 369


>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1125

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 113 LDLSRKFGSKKHK--KIMEQREKLKVNVQTVTDQMQNVSQNISEDQLDLSN 161
           L+  +K    KH    +M ++ KL   V  +T+Q +   + +SE Q+ L++
Sbjct: 908 LNSQQKLYDLKHSYSSVMTEKSKLSDQVNDLTEQAKITQRKLSEVQIALAD 958


>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
           Prp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 906

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 15/66 (22%), Positives = 32/66 (48%)

Query: 88  EVGTVDLKPYLKVDLDNSQLMETSNLDLSRKFGSKKHKKIMEQREKLKVNVQTVTDQMQN 147
           EV      PY   D +  ++ ++    LS++  S++ K+   Q+EK +     V+ Q  +
Sbjct: 73  EVALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFAD 132

Query: 148 VSQNIS 153
           + + +S
Sbjct: 133 LKRGLS 138


>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 818

 Score = 25.8 bits (54), Expect = 9.4
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 99  KVDLDNSQLME--TSNLDLSRKFGSKKHKKIMEQREK 133
           +V LDN  L +     +D+ R++  + HK  M  +EK
Sbjct: 32  QVRLDNDMLSQWIRERMDIERQYSDQLHKLAMNMQEK 68


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.316    0.132    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,659,954
Number of Sequences: 5004
Number of extensions: 72084
Number of successful extensions: 296
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 272
Number of HSP's gapped (non-prelim): 37
length of query: 359
length of database: 2,362,478
effective HSP length: 74
effective length of query: 285
effective length of database: 1,992,182
effective search space: 567771870
effective search space used: 567771870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)

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