GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001678-TA|BGIBMGA001678-PA|IPR005806|Rieske [2Fe-2S]
region
         (348 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.4  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   4.1  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   9.5  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   9.5  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
          methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 67 ANLAVGGTVRGSCIECPFH 85
          A++A+GG+  G C E PF+
Sbjct: 75 ASMAMGGSFEGDCNEKPFY 93


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 6   PPPYPNGWFAVAETREL-KVGSVLSIDALGKYSFGCHG 42
           PP +P+ +  +     L KV  ++ +D L KY+ G HG
Sbjct: 524 PPGHPSAFRPLGLVDNLAKVQEMVILDRLTKYTEGPHG 561


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 7/58 (12%)

Query: 38  FGCHGQNLCVYR-----GEDGLA-RCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRF 89
           F C G  +C+       G DG   R  +  C H+G  L +    +GS     + +W +
Sbjct: 734 FNC-GNGVCIDEAEVCDGRDGCGNRADEQVCDHIGYELKLSKKAQGSVEVRVYDRWGY 790


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 7/58 (12%)

Query: 38  FGCHGQNLCVYR-----GEDGLA-RCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRF 89
           F C G  +C+       G DG   R  +  C H+G  L +    +GS     + +W +
Sbjct: 733 FNC-GNGVCIDEAEVCDGRDGCGNRADEQVCDHIGYELKLSKKAQGSVEVRVYDRWGY 789


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.139    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,041
Number of Sequences: 2123
Number of extensions: 19109
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 40
Number of HSP's gapped (non-prelim): 4
length of query: 348
length of database: 516,269
effective HSP length: 65
effective length of query: 283
effective length of database: 378,274
effective search space: 107051542
effective search space used: 107051542
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)