Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001678-TA|BGIBMGA001678-PA|IPR005806|Rieske [2Fe-2S]
region
(348 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB232987-1|BAE94193.1| 429|Drosophila melanogaster Rieske-domai... 277 2e-74
BT021261-1|AAX33409.1| 429|Drosophila melanogaster RE52861p pro... 274 2e-73
BT023516-1|AAY84916.1| 534|Drosophila melanogaster IP11809p pro... 42 0.002
BT022572-1|AAY54988.1| 536|Drosophila melanogaster IP11909p pro... 42 0.002
AE014134-3036|AAF53755.1| 539|Drosophila melanogaster CG10700-P... 42 0.002
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei... 31 2.3
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me... 31 2.3
AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p pro... 31 2.3
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA... 31 2.3
J04516-1|AAA28874.1| 886|Drosophila melanogaster beta-amyloid l... 30 5.4
AY069644-1|AAL39789.1| 392|Drosophila melanogaster LD41023p pro... 30 5.4
AL031883-1|CAA21409.1| 887|Drosophila melanogaster EG:65F1.5,FB... 30 5.4
AL022139-5|CAA18093.1| 887|Drosophila melanogaster EG:65F1.5,FB... 30 5.4
AF348494-1|AAO15385.1| 390|Drosophila melanogaster DAP3 protein. 30 5.4
AF181628-1|AAD55414.1| 887|Drosophila melanogaster Appl protein. 30 5.4
AE014298-59|AAF45520.2| 887|Drosophila melanogaster CG7727-PA p... 30 5.4
AE013599-3396|AAF46846.1| 392|Drosophila melanogaster CG3633-PA... 30 5.4
AE014296-2987|AAF49284.1| 375|Drosophila melanogaster CG14353-P... 29 7.2
AF145662-1|AAD38637.1| 675|Drosophila melanogaster BcDNA.GH1071... 29 9.5
AE014134-1949|AAF53007.1| 675|Drosophila melanogaster CG6495-PA... 29 9.5
>AB232987-1|BAE94193.1| 429|Drosophila melanogaster Rieske-domain
protein Neverland protein.
Length = 429
Score = 277 bits (679), Expect = 2e-74
Identities = 135/346 (39%), Positives = 202/346 (58%), Gaps = 17/346 (4%)
Query: 4 KLPPPYPNGWFAVAETRELKVGSVLSIDALGKYSFGCHGQNLCVYRGEDGLARCVDAYCP 63
+LPPPYPNGW+ + ++ +LK G + C G++L ++R + + +DAYCP
Sbjct: 88 ELPPPYPNGWYGILKSSQLKAGEATCVS--------CLGEDLVIFRSKKDIVFILDAYCP 139
Query: 64 HLGANLAVGGTVRGSCIECPFHKWRFNAA-GTCVSLPGSDIAPKGVSIRTWCVVETDGAI 122
HLGANL +GG+V C+ CPFH+W+F G C+++P S PKG ++ W E DG I
Sbjct: 140 HLGANLGIGGSVADDCVICPFHQWKFRGTDGLCINIPYSTSVPKGSKLKKWISQEVDGFI 199
Query: 123 WIWHDAEGREPLWEITDPP-ELKD-FGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSS 180
+IW+ AE E W++ P E+ D F Y G NEF ++ HIQEIPENGAD+ H NA+H +
Sbjct: 200 FIWYHAEQTELPWDLPVPMGEIDDTFVYHGHNEFYINCHIQEIPENGADIAHFNAIHKKN 259
Query: 181 LLSDLGERYPVLHEIIGRHVWNADW---TKSDDHTSLMHITQEYKVL-KYDLARIDVKVT 236
++ + L + G H W A W T + + ++++ +K+ K+ R++V
Sbjct: 260 FINGSWAQKKRLFGL-GSHHWKARWSPFTGKLKYLAEVNLSHTFKLFGKFGCFRMEVSGK 318
Query: 237 QIGPGHVRLFLKT-SVGPFYIAQSVTPLGPLLQKVIHRVYSPAYNAPVGAFLVRCEAYMF 295
QIGP V L + + + G + Q +TP+ P+LQKV+H Y P + AP+ + E+ MF
Sbjct: 319 QIGPSIVCLEVNSYTFGKIKVFQYITPIEPMLQKVVHEFYGPRWIAPLMKIFIYGESLMF 378
Query: 296 ERDVTIWNSKRFVSAPAYVKTDKTIRTFRNWFGQFYSEHSLSFRDA 341
ERD+ IWN K F P K D +I+ FR WF QFYS +S + +A
Sbjct: 379 ERDIKIWNHKVFNRNPILAKEDASIKKFRLWFSQFYSSNSKIYSEA 424
>BT021261-1|AAX33409.1| 429|Drosophila melanogaster RE52861p
protein.
Length = 429
Score = 274 bits (671), Expect = 2e-73
Identities = 134/346 (38%), Positives = 201/346 (58%), Gaps = 17/346 (4%)
Query: 4 KLPPPYPNGWFAVAETRELKVGSVLSIDALGKYSFGCHGQNLCVYRGEDGLARCVDAYCP 63
+LPPPYPNGW+ + ++ +LK G + C G++L ++R + + +DAYCP
Sbjct: 88 ELPPPYPNGWYGILKSSQLKAGEATCVS--------CLGEDLVIFRSKKDIVFILDAYCP 139
Query: 64 HLGANLAVGGTVRGSCIECPFHKWRFNAA-GTCVSLPGSDIAPKGVSIRTWCVVETDGAI 122
HLGANL +GG+V C+ C FH+W+F G C+++P S PKG ++ W E DG I
Sbjct: 140 HLGANLGIGGSVADDCVICTFHQWKFRGTDGLCINIPYSTSVPKGSKLKKWISQEVDGFI 199
Query: 123 WIWHDAEGREPLWEITDPP-ELKD-FGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSS 180
+IW+ AE E W++ P E+ D F Y G NEF ++ HIQEIPENGAD+ H NA+H +
Sbjct: 200 FIWYHAEQTELPWDLPVPMGEIDDTFVYHGHNEFYINCHIQEIPENGADIAHFNAIHKKN 259
Query: 181 LLSDLGERYPVLHEIIGRHVWNADW---TKSDDHTSLMHITQEYKVL-KYDLARIDVKVT 236
++ + L + G H W A W T + + ++++ +K+ K+ R++V
Sbjct: 260 FINGSWAQKKRLFGL-GSHHWKARWSPFTGKLKYLAEVNLSHTFKLFGKFGCFRMEVSGK 318
Query: 237 QIGPGHVRLFLKT-SVGPFYIAQSVTPLGPLLQKVIHRVYSPAYNAPVGAFLVRCEAYMF 295
QIGP V L + + + G + Q +TP+ P+LQKV+H Y P + AP+ + E+ MF
Sbjct: 319 QIGPSIVCLEVNSYTFGKIKVFQYITPIEPMLQKVVHEFYGPRWIAPLMKIFIYGESLMF 378
Query: 296 ERDVTIWNSKRFVSAPAYVKTDKTIRTFRNWFGQFYSEHSLSFRDA 341
ERD+ IWN K F P K D +I+ FR WF QFYS +S + +A
Sbjct: 379 ERDIKIWNHKVFNRNPILAKEDASIKKFRLWFSQFYSSNSKIYSEA 424
>BT023516-1|AAY84916.1| 534|Drosophila melanogaster IP11809p
protein.
Length = 534
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 51 EDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN-AAGTCVSLPGSDIAP 105
+ G+ R V A CPH GA LA G R + CP+H FN G + PG D P
Sbjct: 34 QSGILRAVGAMCPHRGAPLAKGVLSRNR-VRCPWHGVCFNLETGDIENFPGLDSLP 88
>BT022572-1|AAY54988.1| 536|Drosophila melanogaster IP11909p
protein.
Length = 536
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 51 EDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN-AAGTCVSLPGSDIAP 105
+ G+ R V A CPH GA LA G R + CP+H FN G + PG D P
Sbjct: 36 QSGILRAVGAMCPHRGAPLAKGVLSRNR-VRCPWHGVCFNLETGDIENFPGLDSLP 90
>AE014134-3036|AAF53755.1| 539|Drosophila melanogaster CG10700-PA
protein.
Length = 539
Score = 41.5 bits (93), Expect = 0.002
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 51 EDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN-AAGTCVSLPGSDIAP 105
+ G+ R V A CPH GA LA G R + CP+H FN G + PG D P
Sbjct: 39 QSGILRAVGAMCPHRGAPLAKGVLSRNR-VRCPWHGVCFNLETGDIENFPGLDSLP 93
>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
protein.
Length = 1408
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 DALGKYSFGCHGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN 90
D G Y+ G GQ LC+ G G+ C +A C G + G R EC WR
Sbjct: 259 DQFGHYACGSEGQKLCL-NGWQGV-NCEEAIC-KAGCDPVHGKCDRPGECECR-PGWRGP 314
Query: 91 AAGTCVSLPG 100
C+ PG
Sbjct: 315 LCNECMVYPG 324
>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
D.melanogaster serrate(Ser) mRNA, complete cds. ).
Length = 1404
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 DALGKYSFGCHGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN 90
D G Y+ G GQ LC+ G G+ C +A C G + G R EC WR
Sbjct: 255 DQFGHYACGSEGQKLCL-NGWQGV-NCEEAIC-KAGCDPVHGKCDRPGECECR-PGWRGP 310
Query: 91 AAGTCVSLPG 100
C+ PG
Sbjct: 311 LCNECMVYPG 320
>AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p
protein.
Length = 950
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 DALGKYSFGCHGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN 90
D G Y+ G GQ LC+ G G+ C +A C G + G R EC WR
Sbjct: 32 DQFGHYACGSEGQKLCL-NGWQGV-NCEEAIC-KAGCDPVHGKCDRPGECECR-PGWRGP 87
Query: 91 AAGTCVSLPG 100
C+ PG
Sbjct: 88 LCNECMVYPG 97
>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
protein.
Length = 1407
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 31 DALGKYSFGCHGQNLCVYRGEDGLARCVDAYCPHLGANLAVGGTVRGSCIECPFHKWRFN 90
D G Y+ G GQ LC+ G G+ C +A C G + G R EC WR
Sbjct: 258 DQFGHYACGSEGQKLCL-NGWQGV-NCEEAIC-KAGCDPVHGKCDRPGECECR-PGWRGP 313
Query: 91 AAGTCVSLPG 100
C+ PG
Sbjct: 314 LCNECMVYPG 323
>J04516-1|AAA28874.1| 886|Drosophila melanogaster beta-amyloid like
protein protein.
Length = 886
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 125 WHDAEGREPLWEITDPPELKDFGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSSLLSD 184
W D E + + DP + F R F+ S E E A+ L A+H +L+
Sbjct: 433 WSDLEEKYQDMRLADPKAAQSFKQRMTARFQTSVQALE-EEGNAEKHQLAAMHQQRVLAH 491
Query: 185 LGER 188
+ +R
Sbjct: 492 INQR 495
>AY069644-1|AAL39789.1| 392|Drosophila melanogaster LD41023p
protein.
Length = 392
Score = 29.9 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 189 YPVLHEIIGRHV-WNADWTKSDDHTSLMHITQEYKVLKYDLARIDVKV-TQIGPGHVRLF 246
Y L++ + HV W +W K S + L +D A V TQ GP RL
Sbjct: 138 YGALNDFLLVHVPWAPNWMKRPKEASNAAGQEGMIDLPFDAAAWLVHFKTQNGPLLQRLQ 197
Query: 247 LKTSVGPFYIAQSVTPLG-PLLQKVIHRVYSPAYNAPVGAFLV 288
LKTS + + TP G L++ V H + Y + A L+
Sbjct: 198 LKTSKEYVWSKRESTPAGSSLIELVEHGIARIKYASETTAALI 240
>AL031883-1|CAA21409.1| 887|Drosophila melanogaster
EG:65F1.5,FBgn0000108;Appl protein.
Length = 887
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 125 WHDAEGREPLWEITDPPELKDFGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSSLLSD 184
W D E + + DP + F R F+ S E E A+ L A+H +L+
Sbjct: 434 WSDLEEKYQDMRLADPKAAQSFKQRMTARFQTSVQALE-EEGNAEKHQLAAMHQQRVLAH 492
Query: 185 LGER 188
+ +R
Sbjct: 493 INQR 496
>AL022139-5|CAA18093.1| 887|Drosophila melanogaster
EG:65F1.5,FBgn0000108;Appl protein.
Length = 887
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 125 WHDAEGREPLWEITDPPELKDFGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSSLLSD 184
W D E + + DP + F R F+ S E E A+ L A+H +L+
Sbjct: 434 WSDLEEKYQDMRLADPKAAQSFKQRMTARFQTSVQALE-EEGNAEKHQLAAMHQQRVLAH 492
Query: 185 LGER 188
+ +R
Sbjct: 493 INQR 496
>AF348494-1|AAO15385.1| 390|Drosophila melanogaster DAP3 protein.
Length = 390
Score = 29.9 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 189 YPVLHEIIGRHV-WNADWTKSDDHTSLMHITQEYKVLKYDLARIDVKV-TQIGPGHVRLF 246
Y L++ + HV W +W K S + L +D A V TQ GP RL
Sbjct: 136 YGALNDFLLVHVPWAPNWMKRPKEASNAAGQEGMIDLPFDAAAWLVHFKTQNGPLLQRLQ 195
Query: 247 LKTSVGPFYIAQSVTPLG-PLLQKVIHRVYSPAYNAPVGAFLV 288
LKTS + + TP G L++ V H + Y + A L+
Sbjct: 196 LKTSKEYVWSKRESTPAGSSLIELVEHGIARIKYASETTAALI 238
>AF181628-1|AAD55414.1| 887|Drosophila melanogaster Appl protein.
Length = 887
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 125 WHDAEGREPLWEITDPPELKDFGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSSLLSD 184
W D E + + DP + F R F+ S E E A+ L A+H +L+
Sbjct: 434 WSDLEEKYQDMRLADPKAAQSFKQRMTARFQTSVQALE-EEGNAEKHQLAAMHQQRVLAH 492
Query: 185 LGER 188
+ +R
Sbjct: 493 INQR 496
>AE014298-59|AAF45520.2| 887|Drosophila melanogaster CG7727-PA
protein.
Length = 887
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 125 WHDAEGREPLWEITDPPELKDFGYRGRNEFEVSAHIQEIPENGADVPHLNAVHSSSLLSD 184
W D E + + DP + F R F+ S E E A+ L A+H +L+
Sbjct: 434 WSDLEEKYQDMRLADPKAAQSFKQRMTARFQTSVQALE-EEGNAEKHQLAAMHQQRVLAH 492
Query: 185 LGER 188
+ +R
Sbjct: 493 INQR 496
>AE013599-3396|AAF46846.1| 392|Drosophila melanogaster CG3633-PA
protein.
Length = 392
Score = 29.9 bits (64), Expect = 5.4
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 189 YPVLHEIIGRHV-WNADWTKSDDHTSLMHITQEYKVLKYDLARIDVKV-TQIGPGHVRLF 246
Y L++ + HV W +W K S + L +D A V TQ GP RL
Sbjct: 138 YGALNDFLLVHVPWAPNWMKRPKEASNAAGQEGMIDLPFDAAAWLVHFKTQNGPLLQRLQ 197
Query: 247 LKTSVGPFYIAQSVTPLG-PLLQKVIHRVYSPAYNAPVGAFLV 288
LKTS + + TP G L++ V H + Y + A L+
Sbjct: 198 LKTSKEYVWSKRESTPAGSSLIELVEHGIARIKYASETTAALI 240
>AE014296-2987|AAF49284.1| 375|Drosophila melanogaster CG14353-PA
protein.
Length = 375
Score = 29.5 bits (63), Expect = 7.2
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 119 DGAIWIWHDAEGREPLWEITDPPELKD 145
DGA+ +W +G+ P+ +++ PP++ D
Sbjct: 135 DGAVKVWDIRQGQAPVVDMSPPPQMGD 161
>AF145662-1|AAD38637.1| 675|Drosophila melanogaster BcDNA.GH10711
protein.
Length = 675
Score = 29.1 bits (62), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 34 GKYSFGCH-GQNLCVYRGEDGLARCVD 59
G++ F CH G+ + VY DG+ +C D
Sbjct: 219 GRFQFTCHSGECIAVYNACDGIPQCED 245
>AE014134-1949|AAF53007.1| 675|Drosophila melanogaster CG6495-PA
protein.
Length = 675
Score = 29.1 bits (62), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 34 GKYSFGCH-GQNLCVYRGEDGLARCVD 59
G++ F CH G+ + VY DG+ +C D
Sbjct: 219 GRFQFTCHSGECIAVYNACDGIPQCED 245
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.139 0.456
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,098,852
Number of Sequences: 52641
Number of extensions: 859533
Number of successful extensions: 1555
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1541
Number of HSP's gapped (non-prelim): 20
length of query: 348
length of database: 24,830,863
effective HSP length: 86
effective length of query: 262
effective length of database: 20,303,737
effective search space: 5319579094
effective search space used: 5319579094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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