GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001677-TA|BGIBMGA001677-PA|IPR001810|Cyclin-like F-box
         (427 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   3.0  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     24   9.1  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 386 PKKVAVLTFSHCFKRAASIAMFSNSNLQRV 415
           P K +V++FSH     +     SNS+L RV
Sbjct: 741 PDKCSVISFSHSLSPISFNYTLSNSSLSRV 770


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 30  QLTKCREVCIRWKNVIDTLNKYH 52
           QL   +EV  RW +  D LN+++
Sbjct: 318 QLKMIQEVSTRWNSGYDMLNRFY 340


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.139    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,846
Number of Sequences: 2123
Number of extensions: 19943
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 2
length of query: 427
length of database: 516,269
effective HSP length: 66
effective length of query: 361
effective length of database: 376,151
effective search space: 135790511
effective search space used: 135790511
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 49 (23.8 bits)