Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001677-TA|BGIBMGA001677-PA|IPR001810|Cyclin-like F-box
(427 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001595-1|AAN71350.1| 559|Drosophila melanogaster RE28319p pro... 37 0.061
AE014297-4385|AAF56899.2| 515|Drosophila melanogaster CG2010-PA... 37 0.061
AY069210-1|AAL39355.1| 511|Drosophila melanogaster GH26184p pro... 35 0.19
AE014297-4384|AAN14173.1| 511|Drosophila melanogaster CG2010-PB... 35 0.19
BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p pro... 34 0.43
AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA... 34 0.43
BT021402-1|AAX33550.1| 437|Drosophila melanogaster LD12638p pro... 32 1.7
AY121669-1|AAM51996.1| 1302|Drosophila melanogaster RE14657p pro... 32 1.7
AE013599-1328|AAF58635.1| 464|Drosophila melanogaster CG9003-PA... 32 1.7
BT003599-1|AAO39602.1| 391|Drosophila melanogaster GM10337p pro... 31 3.0
AY078386-1|AAL83648.1| 491|Drosophila melanogaster F box/ubiqui... 31 3.0
AF145603-1|AAD38578.1| 491|Drosophila melanogaster BcDNA.GH0243... 31 3.0
AE014134-738|AAF51013.1| 491|Drosophila melanogaster CG15437-PA... 31 3.0
AY118494-1|AAM49863.1| 740|Drosophila melanogaster LD05535p pro... 31 4.0
AE013599-2751|AAF57649.3| 740|Drosophila melanogaster CG15087-P... 31 4.0
M59077-1|AAA28680.1| 1302|Drosophila melanogaster P-glycoprotein... 30 5.3
AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p pro... 30 5.3
AF251287-1|AAF69147.1| 1302|Drosophila melanogaster P-glycoprote... 30 5.3
AF251286-1|AAF69146.1| 1302|Drosophila melanogaster P-glycoprote... 30 5.3
AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of P... 30 5.3
AE014296-1105|AAF50669.1| 1302|Drosophila melanogaster CG10181-P... 30 5.3
AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA... 30 5.3
>BT001595-1|AAN71350.1| 559|Drosophila melanogaster RE28319p
protein.
Length = 559
Score = 36.7 bits (81), Expect = 0.061
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 9 TPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNV 44
T +E P ++L HIF++L +++ + +C RW+ +
Sbjct: 76 TTIEKLPDKVLLHIFSYLSHREICRLARICRRWRQI 111
>AE014297-4385|AAF56899.2| 515|Drosophila melanogaster CG2010-PA,
isoform A protein.
Length = 515
Score = 36.7 bits (81), Expect = 0.061
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 9 TPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNV 44
T +E P ++L HIF++L +++ + +C RW+ +
Sbjct: 32 TTIEKLPDKVLLHIFSYLSHREICRLARICRRWRQI 67
>AY069210-1|AAL39355.1| 511|Drosophila melanogaster GH26184p
protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.19
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 11 LESFPTEILSHIFTFLPAKQLTKCREVCIRWKNV 44
+E P ++L HIF++L +++ + +C RW+ +
Sbjct: 30 IEKLPDKVLLHIFSYLSHREICRLARICRRWRQI 63
>AE014297-4384|AAN14173.1| 511|Drosophila melanogaster CG2010-PB,
isoform B protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.19
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 11 LESFPTEILSHIFTFLPAKQLTKCREVCIRWKNV 44
+E P ++L HIF++L +++ + +C RW+ +
Sbjct: 30 IEKLPDKVLLHIFSYLSHREICRLARICRRWRQI 63
>BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p
protein.
Length = 667
Score = 33.9 bits (74), Expect = 0.43
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 11 LESFPTEILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 48
L P EIL IFT+LP L C VC RW ++ L
Sbjct: 24 LNVLPDEILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62
>AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA
protein.
Length = 667
Score = 33.9 bits (74), Expect = 0.43
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 11 LESFPTEILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 48
L P EIL IFT+LP L C VC RW ++ L
Sbjct: 24 LNVLPDEILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62
>BT021402-1|AAX33550.1| 437|Drosophila melanogaster LD12638p
protein.
Length = 437
Score = 31.9 bits (69), Expect = 1.7
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 5 EDEVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNVI 45
+DE+ ++ P E+L +F++L L +C +VC W NV+
Sbjct: 22 DDEL--IKQLPKEVLLRVFSYLDVVSLCRCAQVCKYW-NVL 59
>AY121669-1|AAM51996.1| 1302|Drosophila melanogaster RE14657p protein.
Length = 1302
Score = 31.9 bits (69), Expect = 1.7
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 125 GVHTKAGVVYYDLDTLQRSI-RAVIYGDYNRYVETDDTVLLMNS-NLHLFI 173
GV TK G+V + +RSI ++YGD R V + + S N H FI
Sbjct: 1133 GVRTKLGIVSQEPTLFERSIAENIVYGDNRRSVSMVEIIAAAKSANAHSFI 1183
>AE013599-1328|AAF58635.1| 464|Drosophila melanogaster CG9003-PA
protein.
Length = 464
Score = 31.9 bits (69), Expect = 1.7
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 5 EDEVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKNVI 45
+DE+ ++ P E+L +F++L L +C +VC W NV+
Sbjct: 49 DDEL--IKQLPKEVLLRVFSYLDVVSLCRCAQVCKYW-NVL 86
>BT003599-1|AAO39602.1| 391|Drosophila melanogaster GM10337p
protein.
Length = 391
Score = 31.1 bits (67), Expect = 3.0
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 15 PTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLW 55
P E++ IF +L L EVC +W +++ N S+W
Sbjct: 135 PVEVMLKIFAYLDDMSLWMASEVCKQWHDIVGK-NTAQSMW 174
>AY078386-1|AAL83648.1| 491|Drosophila melanogaster F box/ubiquitin
conjugase protein.
Length = 491
Score = 31.1 bits (67), Expect = 3.0
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 15 PTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLW 55
P E++ IF +L L EVC +W +++ N S+W
Sbjct: 235 PVEVMLKIFAYLDDMSLWMASEVCKQWHDIVGK-NTAQSMW 274
>AF145603-1|AAD38578.1| 491|Drosophila melanogaster BcDNA.GH02435
protein.
Length = 491
Score = 31.1 bits (67), Expect = 3.0
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 15 PTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLW 55
P E++ IF +L L EVC +W +++ N S+W
Sbjct: 235 PVEVMLKIFAYLDDMSLWMASEVCKQWHDIVGK-NTAQSMW 274
>AE014134-738|AAF51013.1| 491|Drosophila melanogaster CG15437-PA
protein.
Length = 491
Score = 31.1 bits (67), Expect = 3.0
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 15 PTEILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLW 55
P E++ IF +L L EVC +W +++ N S+W
Sbjct: 235 PVEVMLKIFAYLDDMSLWMASEVCKQWHDIVGK-NTAQSMW 274
>AY118494-1|AAM49863.1| 740|Drosophila melanogaster LD05535p
protein.
Length = 740
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 128 TKAGVVYYDLDTLQRSIRAVIYGDYNRYVETDDTVLLMNSN 168
T+A VV D TL ++ ++Y +YN+++ DT+ M +
Sbjct: 37 TEAAVVK-DTQTLHSDMQTLVYENYNKFISATDTIRRMKDD 76
>AE013599-2751|AAF57649.3| 740|Drosophila melanogaster CG15087-PA
protein.
Length = 740
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 128 TKAGVVYYDLDTLQRSIRAVIYGDYNRYVETDDTVLLMNSN 168
T+A VV D TL ++ ++Y +YN+++ DT+ M +
Sbjct: 37 TEAAVVK-DTQTLHSDMQTLVYENYNKFISATDTIRRMKDD 76
>M59077-1|AAA28680.1| 1302|Drosophila melanogaster P-glycoprotein
protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 125 GVHTKAGVVYYDLDTLQRSI-RAVIYGDYNRYVETDDTVLLMNS-NLHLFI 173
GV TK G+V + +RSI + YGD R V + + S N H FI
Sbjct: 1133 GVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFI 1183
>AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p
protein.
Length = 538
Score = 30.3 bits (65), Expect = 5.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 7 EVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKN 43
E T + + E+L IF LP + L + +VC W++
Sbjct: 145 EGTHISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRD 181
>AF251287-1|AAF69147.1| 1302|Drosophila melanogaster P-glycoprotein
protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 125 GVHTKAGVVYYDLDTLQRSI-RAVIYGDYNRYVETDDTVLLMNS-NLHLFI 173
GV TK G+V + +RSI + YGD R V + + S N H FI
Sbjct: 1133 GVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFI 1183
>AF251286-1|AAF69146.1| 1302|Drosophila melanogaster P-glycoprotein
protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 125 GVHTKAGVVYYDLDTLQRSI-RAVIYGDYNRYVETDDTVLLMNS-NLHLFI 173
GV TK G+V + +RSI + YGD R V + + S N H FI
Sbjct: 1133 GVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFI 1183
>AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of
Paired protein.
Length = 538
Score = 30.3 bits (65), Expect = 5.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 7 EVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKN 43
E T + + E+L IF LP + L + +VC W++
Sbjct: 145 EGTHISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRD 181
>AE014296-1105|AAF50669.1| 1302|Drosophila melanogaster CG10181-PA
protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 125 GVHTKAGVVYYDLDTLQRSI-RAVIYGDYNRYVETDDTVLLMNS-NLHLFI 173
GV TK G+V + +RSI + YGD R V + + S N H FI
Sbjct: 1133 GVRTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFI 1183
>AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA
protein.
Length = 538
Score = 30.3 bits (65), Expect = 5.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 7 EVTPLESFPTEILSHIFTFLPAKQLTKCREVCIRWKN 43
E T + + E+L IF LP + L + +VC W++
Sbjct: 145 EGTHISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRD 181
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.325 0.139 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,988,890
Number of Sequences: 52641
Number of extensions: 898750
Number of successful extensions: 2510
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2497
Number of HSP's gapped (non-prelim): 26
length of query: 427
length of database: 24,830,863
effective HSP length: 87
effective length of query: 340
effective length of database: 20,251,096
effective search space: 6885372640
effective search space used: 6885372640
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 63 (29.5 bits)
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