Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001676-TA|BGIBMGA001676-PA|undefined
(416 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 37 0.006
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 32 0.17
SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces pomb... 31 0.40
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.69
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 29 1.2
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 29 1.2
SPBC2G5.07c |rpc25||DNA-directed RNA polymerase III complex subu... 29 1.6
SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe... 29 1.6
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 29 1.6
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 28 2.1
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 28 2.1
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 28 2.8
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 27 3.7
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 27 3.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.7
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 27 4.9
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 27 4.9
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 27 4.9
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 4.9
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 27 4.9
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 4.9
SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit Prp31|S... 27 6.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 6.4
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 27 6.4
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 27 6.4
SPBC557.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 6.4
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 27 6.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 6.4
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 26 8.5
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 26 8.5
SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyce... 26 8.5
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 36.7 bits (81), Expect = 0.006
Identities = 52/276 (18%), Positives = 112/276 (40%), Gaps = 14/276 (5%)
Query: 111 TKIERAKAMNNEKKSKFKSKILNRNYDDNFIVLKXXXXXXXXXXXLYSDQSRDVCKINSN 170
+++E++K++NN + +SK D N + K + + ++ K N
Sbjct: 733 SELEKSKSLNNSLAA-LESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALN 791
Query: 171 NVTAIAKEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKESLET 230
+ + ++ K K + E +T + E ++ N + E +A D S+E+
Sbjct: 792 DNLGNKENIISDLKNK---LSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMES 848
Query: 231 ------NKLKLSESNLGFEIEESV--AKKLVDNNIEVATKINDSNKKIVKP-TTNYYDNN 281
N+LKL++ ++E + KL + E + + + K +T +
Sbjct: 849 INKNQANELKLAKQKCS-NLQEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELK 907
Query: 282 FVLEDYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRE 341
V + S K+V D K K + K Q+ + + + + ++ +DI+ +
Sbjct: 908 TVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDEEIERLKVDIIGLQ 967
Query: 342 LTNSSLGSVEPQNFYQSLKFIAKTKKANAKLKYADE 377
+ ++ S++ + +K K+ KLK ADE
Sbjct: 968 NASLNMQSLKDSDNRTISDLESKNKELEKKLKEADE 1003
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 31.9 bits (69), Expect = 0.17
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 256 NIEVATKINDSNKKIVKPTTNYYDNNFVLEDYL-----SYKTVFKSDNRKPKLHEKNRLK 310
N + ++ + D NKK +KP D F L+ YL S ++ F+ +P N+
Sbjct: 42 NSDTSSILFDKNKKPLKPKIIIPDKEFDLDYYLKDETESIQSPFEGFTAQPNFSNFNKQG 101
Query: 311 STPQSTSNYSRFNKSTKK 328
+T +N+ R N+ ++
Sbjct: 102 NTMNREANFQRTNEKIQR 119
>SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 118
Score = 30.7 bits (66), Expect = 0.40
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 286 DYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNS 345
DY+ K+ +KP +K K + +S +KS + +L+ + T+S
Sbjct: 2 DYVGGSLKLKNVKKKPLKKKKKDSKKLAEKVQEHSSRDKSPLEENGVSTYQMLRSKDTDS 61
Query: 346 SLGSVEPQNFYQSLKFIAKTKKA-NAKLK-YADEMRDKN 382
++ E Q ++S++ +KA N +LK + D + + N
Sbjct: 62 AMPMTEAQKHFESVQEQRLLQKAKNERLKTHKDRIDEYN 100
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.9 bits (64), Expect = 0.69
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 250 KKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFV-LEDYLSYKTVFKSDNRKPKLHEKNR 308
KKL N NDSN + KP + D V ++ S K+ N ++
Sbjct: 41 KKL--NKASAFNSDNDSNYDL-KPEDDEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQS 97
Query: 309 LKSTPQSTSN--YSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIAKTK 366
++ + S + KS+KK + D L ++ + SL E ++ +S K K K
Sbjct: 98 VEEEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKK---KKK 154
Query: 367 KANAKLKYADEMRDKNPECVFKRRKIIAKSRKN 399
K+ +K ++ + D + E K +K KS++N
Sbjct: 155 KSKSKDDGSEALDDGDIESSEKDKKKKKKSKEN 187
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 239 NLGFEIEESVAKKLVDNNIEVATKINDSNKKIVK 272
NLG ++ ++ ++DN IE + +I D K +K
Sbjct: 246 NLGASVDLNILSHVIDNQIEYSMEITDKTKADIK 279
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 29.1 bits (62), Expect = 1.2
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
Query: 216 ETTFSACDMKESLETNKLKLSESNLGFEIE-ESVAKKLVDNNIEVATKINDSNKKI-VKP 273
E D+ +L K K +S + F+ E ++V+K + + AT +DS +K K
Sbjct: 5 EAVVDQIDLNGALPEKKKKPKKS-VAFDDEVDAVSKDGPEASSAGATDEDDSERKSSAKD 63
Query: 274 TTNYYDNNFV--LED-YLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRM 330
T V L+D + S K KS E+ +T ++S K KK+
Sbjct: 64 LTTPVTEGEVDELKDMFSSMKKKKKSKKSSASAEEQTEDITTESGELDFSSMKKKKKKKK 123
Query: 331 KSDFIDILKRELTNSSLG 348
+D + ++EL SS G
Sbjct: 124 SAD-LSAFEKELEASSTG 140
>SPBC2G5.07c |rpc25||DNA-directed RNA polymerase III complex subunit
Rpc25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 203
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 262 KINDSNKKIVKPTTNYYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSR 321
KI +++ ++ T +++D+ F+ +D L VF+ D R K + + T Y
Sbjct: 88 KIKSCSEEGIRVTISFFDDIFIPKDMLFDPCVFRPDER--AWVWKIEGEDGSEGTELYFD 145
Query: 322 FNKSTKKRMKS-DFIDILKRELTNSS 346
++ + +++S DF+DI + N++
Sbjct: 146 IDEEIRFQIESEDFVDISPKRNKNAT 171
>SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 28.7 bits (61), Expect = 1.6
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 251 KLVDNNIEVATKINDSN-KKIVKPTTNYYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRL 309
K + E + K+ +SN +K K ++Y+N D K + KS + KL E+N
Sbjct: 118 KRIQERDESSKKLRESNIEKARKAIDDFYENFNDKRD----KVIAKSRKEQEKLLEENES 173
Query: 310 KSTPQSTSNYSRFNK 324
KST T+++ R K
Sbjct: 174 KST--GTTSWERILK 186
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/90 (20%), Positives = 41/90 (45%)
Query: 196 LVSEHKANDKNLYNFFVDILETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDN 255
+V+E +A + + I + D +++L L+L E + +K +
Sbjct: 599 VVAESEAAKNMVESSNASIQQLKSEVADKEQTLAQLHLQLDEMTQRLVSLDEESKAVSQR 658
Query: 256 NIEVATKINDSNKKIVKPTTNYYDNNFVLE 285
+++ KIN+S ++ T Y++++ LE
Sbjct: 659 KLDLEYKINNSKTQLATATEEYHEHSKQLE 688
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 183 KKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKESLETNKLKLSESNLGF 242
++ +R+T+D ++ + KAN N++N + +A E+L+ + ++GF
Sbjct: 1092 QQLRRMTMDYCKRMLLDRKANVTNVFNTIGLPIHQQMAATIFLENLKEFSVYCDAHSIGF 1151
Query: 243 EIEESVAKKLVDNNIEVATKINDS-NKKIV 271
+ + + + + + I DS KKI+
Sbjct: 1152 LVSKLLHYEFYEVQLTTLRSIVDSPRKKII 1181
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 215 LETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSN 267
L T ++ + +SL TN KL ++ + EES ++LV N+I+ AT S+
Sbjct: 132 LTTNDTSIILDDSLHTNSKKLGKTRNEVK-EESQKRELVSNSIKEATSPKTSS 183
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 252 LVDNNIEVATKINDSNKKIVKPTTNYY---DNNFVLEDYLSYKT 292
L+ N I+V T + +SN+ ++ YY D F L + + + T
Sbjct: 587 LISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFAT 630
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 101 KSGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNYDDNF 140
K+GE + + I KA++ EK+ +L ++YD+ F
Sbjct: 284 KNGENGLENNSSIREIKALDVEKRYVLYESLLEQSYDNIF 323
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 303 LHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTN 344
+H+ N ST++ + N ST R S+F D L R +++
Sbjct: 347 IHDNNLFTKASISTTSLVKSNVSTNSRKSSNFEDELARRVSS 388
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 3.7
Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 15/175 (8%)
Query: 102 SGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNYDDNFIVLKXXXXXXXXXXXLYSDQS 161
+GE I T+IE+ +A N++ +SK +++ Y++ ++
Sbjct: 1023 NGENIASLQTEIEKKRAENDDLQSKL--SVVSSEYENLLLISSQTNKSLEDKTNQLKYIE 1080
Query: 162 RDVCK-INSNNVTAIAKEVLEGKKTK----RVTI-DEPATLVSEHKANDKNLYNFFVDIL 215
++V K ++ + + E L K K I DE L + K NF D+
Sbjct: 1081 KNVQKLLDEKDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLK 1140
Query: 216 ETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKI 270
E + D E L K +E + E S + LV+ ++A +++D K +
Sbjct: 1141 EKS----DALEQLTNEK---NELIVSLEQSNSNNEALVEERSDLANRLSDMKKSL 1188
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 27.1 bits (57), Expect = 4.9
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 309 LKSTPQSTSNY-SRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIAKTKK 367
L+S Q ++Y + N++T K S ++L + + + EP +S+ A KK
Sbjct: 81 LESLIQDLTHYFGKLNENTVKDNVSFIFELLDEMIDYGIIQTTEPDALARSVSITAVKKK 140
Query: 368 ANA 370
NA
Sbjct: 141 GNA 143
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 27.1 bits (57), Expect = 4.9
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 225 KESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVL 284
K LETN+L + + N + + + + + VAT N ++++ T N+ + F
Sbjct: 280 KPVLETNRLLVGKGNGNIFVYDIIWSESTSKAVLVATITNAHDEQVCGLTWNHDGSQFAS 339
Query: 285 EDYLSYKTVFK-SDNRKP 301
+ +FK SD R+P
Sbjct: 340 GGNDNRVCLFKGSDLRQP 357
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 27.1 bits (57), Expect = 4.9
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 223 DMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDNNF 282
+++E+ E K LS N E +E + + N+EVA DS K++ K Y D
Sbjct: 1455 ELQEAREVGKRALSTINYREE-DEKLNVWMALLNLEVAYGTEDSLKEVFKEACAYCDALI 1513
Query: 283 VLE 285
V E
Sbjct: 1514 VYE 1516
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 4.9
Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 7/137 (5%)
Query: 204 DKNLYNFFVDILETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKI 263
DK N I T ++ E ++ K +NL FE + K + N E A +
Sbjct: 432 DKKESNVTSKIKSTAENSSKPLSMNEADERKDGLNNLLFENKSGANTKEMSNGTETAKEN 491
Query: 264 NDSNKKIVKPTTNYYD------NNFVLEDYLSYKTVFKSDNRK-PKLHEKNRLKSTPQST 316
+ PT+ Y D + L K N+ P H K R KS + T
Sbjct: 492 CSPQQDSTSPTSGYQDLVKELAKEIEMRKSLELKLKLSQSNKAGPVKHRKRRPKSKRRIT 551
Query: 317 SNYSRFNKSTKKRMKSD 333
+ + ++SD
Sbjct: 552 GKVVFDSPNVASGVESD 568
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 27.1 bits (57), Expect = 4.9
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 214 ILETTFSACDMKESLET--NKLKLSESNLGFEIEE---SVAKKLVDNNIEVATKINDSNK 268
+L+ + C KE +T N LS S + +I S K L + ++T
Sbjct: 1167 LLQKVINRCFSKEISQTISNYYFLSLSEMLIQINPNNLSKPKLLPLCLVNLSTNNLSVRL 1226
Query: 269 KIVKPTTNYYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYS 320
K + N++ NNF + + +KT +S N P L+ K + + Q S+++
Sbjct: 1227 KAFELLGNFHLNNFTMTALMEFKTFLESSN--PALYLKPQYLFSVQLASDFT 1276
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 4.9
Identities = 21/68 (30%), Positives = 28/68 (41%)
Query: 23 VKDKTLNDSALNVLPETKKKGIYVEKRNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVL 82
V KT + NV E I ++ N A Q L N RR NKQ L + +
Sbjct: 83 VAAKTASSFNPNVKLEAYHANIKEDRFNVAWFRQFDLVFNALDNLDARRHVNKQCLLASV 142
Query: 83 NILSKGTT 90
++ GTT
Sbjct: 143 PLIESGTT 150
>SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit
Prp31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 213 DILETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVK 272
DI ETT S + + K +L L E ++ +L +N++++ TKI+DS +K+
Sbjct: 13 DIEETTESTITDELGPDAKKRRLE---LQLEEGNGISAEL-ENDLDI-TKISDSAQKLPS 67
Query: 273 PTTNYYDNN 281
N +++N
Sbjct: 68 EVANKFNDN 76
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 6.4
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 49 RNFAQKTQ--VTKRLKTLPNQIT--RRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGE 104
+NF K+ ++ KT P + T RR+ K + S I S +T+ P PA +S +
Sbjct: 1203 QNFGIKSSPAISTNGKTQPKKQTANRRQSGKPNVKSAQKIES----ATRTPSPAISESRK 1258
Query: 105 EIIPKTTKIERAKAMNNEKKSKFKSKILNRNYDDN 139
+ K TKIE + +S+ S + + D N
Sbjct: 1259 KPSSKDTKIETPS--REQSRSQTASPVKSEKDDGN 1291
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 26.6 bits (56), Expect = 6.4
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 217 TTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNI--EVATKINDSNKKIVKPT 274
TT+S + + N+ + S S + I ES +++V+NN+ ++ T N N K
Sbjct: 59 TTYSEINNIHDVPGNQDEWSSSPIAGIIVESEDEEVVENNLHSQMGTSCNKINSNSNKGK 118
Query: 275 TNYYDNNFVLED 286
N + FVL+D
Sbjct: 119 ENMH---FVLDD 127
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 26.6 bits (56), Expect = 6.4
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Query: 201 KANDKNLYN---FFVDILETTFSACDMKES----LETNKLKLSESNLGFEIEESVAKKLV 253
K N+ N+Y VDILE CD++ES T ++ N + S + +
Sbjct: 276 KINEDNVYASQIHLVDILEILTVHCDLEESFSIVFSTQPRFIARYNELVQAVSSSSNSEI 335
Query: 254 DNNIEVATKINDSNKKIVKPTTNYYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNR 308
D +E A I+ + N N+ V ED T+ ++D + EK R
Sbjct: 336 D-EVEDAETIDSKILEKRNDLNNEEPNSVVAEDGSEIITLDENDQSPNEATEKLR 389
>SPBC557.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 358 SLKFIAKTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRN 402
S++ K K A L+Y + ++PE + K RK+ A + RN
Sbjct: 47 SIEDAEKIKTYPAALRYIFALNSRHPEKLQKLRKMKAMQERQERN 91
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 6.4
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 250 KKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRL 309
++L++N +A IN + +PT D ++ SY S N L++ NR
Sbjct: 4 QQLLENIASLAGAINQYKNEKAEPT-QVLDAAKANKNTRSYPYSV-SRNYSFILNKSNRS 61
Query: 310 KST--------PQSTSNYSRFNKSTKKRMKSDFIDILKREL 342
KST P ++SN NK +K+ SD++ R +
Sbjct: 62 KSTAASPPYVIPSTSSNADDANKEPEKQSTSDYVSRKNRHM 102
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 6.4
Identities = 51/247 (20%), Positives = 97/247 (39%), Gaps = 23/247 (9%)
Query: 158 SDQSRDVCKINSNNVTAIAKEVLEGKKTKRVTIDEPATLVSEHKANDKNLY--------- 208
++ S + K+ ++ TAI E + K + ++ L+SE + +DK L
Sbjct: 555 TEDSHEPVKVTEDSQTAIHVSKFEDLENKSMESEQSLQLLSESENDDKPLIDLIPLLAIK 614
Query: 209 ---NFFVDILETTFSACDMKESLETNKLKLSE---SNLGFEIEESVAKKLVDNNIEVATK 262
N +LE S K +T+ + E + + + E K + D + V
Sbjct: 615 RKDNLVSGVLEKGKSTSTSKTKFDTSIVDFIEKPKTEISEVLPEEKRKAICDESQTVRVS 674
Query: 263 IN---DSNKKIVKPTTNYYDNNFVLEDYLSYKTVFK--SDNRKPKLHEKNRLKSTPQSTS 317
I+ + + P ++ N E+ S TV S + + N L+S
Sbjct: 675 IDRGVTKTRDVSSPVSDEKSENVNHEEANSGHTVMNVHSSLDPQPIVQPNELESGSYLKD 734
Query: 318 NYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIAKTKKANAKLKYADE 377
R N +++ DI +L + + +VE N S K + K+AN +L+ ++
Sbjct: 735 LPDR-NVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKL--QEKEANHELENIEK 791
Query: 378 MRDKNPE 384
+ +K E
Sbjct: 792 IEEKLTE 798
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 26.2 bits (55), Expect = 8.5
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 211 FVDILETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKI 270
F ++L +SA ++ E T+ N E+ + +A L+D N E++ + +I
Sbjct: 765 FHNMLSFKYSANEIYEFCGTHSRAEVHKN---EVLKRMAYYLIDENKEISILRRILSLRI 821
Query: 271 VKPTTNY 277
V+PTT++
Sbjct: 822 VEPTTSF 828
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 54 KTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSK-GTTSTQFPEPAPDKSGEEII 107
+TQ+ K++ L + + +Q +SS++N L K TT + E P++ E I
Sbjct: 481 ETQLNKQINLLVKKRVTEENLEQEISSIINDLPKISTTKRKDYEELPEEVSETSI 535
>SPAC8F11.03 |msh3|swi4|MutS protein homolog 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1004
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 50 NFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGTT 90
NF K V ++ +T + T N F V +L+KGTT
Sbjct: 173 NFGLKVAVVRQTETAALKSTSSSRNTLFDRRVARVLTKGTT 213
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.127 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,823,844
Number of Sequences: 5004
Number of extensions: 79262
Number of successful extensions: 310
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 293
Number of HSP's gapped (non-prelim): 37
length of query: 416
length of database: 2,362,478
effective HSP length: 75
effective length of query: 341
effective length of database: 1,987,178
effective search space: 677627698
effective search space used: 677627698
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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