Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001676-TA|BGIBMGA001676-PA|undefined
(416 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054 34 0.18
04_04_0413 + 25032061-25032304,25032604-25032627,25033618-25033940 33 0.42
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 32 0.74
11_06_0710 - 26492093-26493460 31 1.3
02_03_0097 + 15166077-15166349,15166623-15166694,15166715-151671... 31 2.3
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 30 3.0
09_04_0175 - 15353903-15354005,15354189-15354280,15354408-153545... 30 3.9
03_01_0448 - 3444608-3444814,3446419-3446497,3446567-3446691,344... 30 3.9
02_02_0190 - 7630282-7630287,7630383-7630547,7630641-7630691,763... 30 3.9
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 29 9.1
05_02_0100 + 6594787-6594878,6595443-6595728,6595809-6595887,659... 29 9.1
04_04_1580 - 34576595-34576723,34576905-34576981,34577058-345771... 29 9.1
>08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054
Length = 995
Score = 34.3 bits (75), Expect = 0.18
Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 110 TTKIERAKAMNNEKKSKFKSKILNRNYDDNFIVLKXXXXXXXXXXXLYSDQSRDV-CKIN 168
T+K+ ++ + +K+ K +L+ + +++ ++L L D +
Sbjct: 43 TSKVIQSSIIGRDKERKQVVSLLSASDEEDTVILPIYGFGGIGKTALAQLVFNDTQFRGY 102
Query: 169 SNNVTAIAKEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKESL 228
+ V +V + KK I + + ++++ +N+ D+LE + + +
Sbjct: 103 DHRVWVYVSQVFDLKKIGNTIISQVSNEGNKNEYTRENINGRLCDLLEDKNTLIVLDDLW 162
Query: 229 ETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKI 263
ETN L+E NL + + + N +VA KI
Sbjct: 163 ETNDFHLNELNLMLNTKGKIKVLVTTRNEDVAKKI 197
>04_04_0413 + 25032061-25032304,25032604-25032627,25033618-25033940
Length = 196
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 315 STSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFY---------QSLKFIAKT 365
STS + + K M+ F+D+L EL + + E + Q+ ++ +
Sbjct: 87 STSGCGKNDPELSKEMEKQFVDLLNEELKLQQIVAEEHSHHMNATLVEAKRQATQYQREA 146
Query: 366 KKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNI 403
+K NA + +E R+++ + K +K+ A + R +
Sbjct: 147 EKCNAATETCEEARERSEAAISKEKKLTALWEQRARQL 184
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 32.3 bits (70), Expect = 0.74
Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 294 FKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQ 353
F+S NR P + L+++ ++TS R + + + K + EP
Sbjct: 653 FQSVNR-PATTKNCHLEASRETTSANPTEKPKVWSRPRKEVEPVGKPKARGHPKKQAEPD 711
Query: 354 NFYQSLKFIAKTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNIVGSTKTLNAV 413
++ + KT +AN K + D +N E + ++ K+++ + + + + K L A+
Sbjct: 712 EKPKARGRVRKTTEANGKAEDRDPTMKENDEAIIEKLKLLSINMTSNNTVEETPKDLGAL 771
>11_06_0710 - 26492093-26493460
Length = 455
Score = 31.5 bits (68), Expect = 1.3
Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 235 LSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVLEDYLSYKTVF 294
LS + E +S+A+ + D + + KK K + + ++ +D K+
Sbjct: 105 LSVDDSQAEPADSIAEPVEDGTDDGEDESEKKKKKKKKKSKSKSSDDD--DDDAEKKSKK 162
Query: 295 KSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQN 354
KS N +K + K P++ + K +KK+ + D K++ S G +
Sbjct: 163 KSKNSDDDEDDKKKSKKKPKNPDDDEDDKKKSKKKSSDEDNDGAKKKKKKKSKGKSSDEE 222
Query: 355 FYQSLKFIAKTKKANAKLKYADEMRDKN 382
+ K +K+K ++ DE + K+
Sbjct: 223 DDEKPKKKSKSKSKSSSSDEEDEKKSKS 250
>02_03_0097 +
15166077-15166349,15166623-15166694,15166715-15167161,
15167579-15167794,15167873-15168213,15168329-15168947
Length = 655
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 321 RFNKSTKKRMKSDFIDILKRELTNS-SLGSVEPQNFYQSLKFIAKTKKANAKLKYADEMR 379
R ++ T +R K+D ++ +K E+ +G + P + + + I K N K++ + R
Sbjct: 557 RPHQQTPRRCKADMLEPVKAEIKQLYDVGFIRPCRYAEWVSSIVPVIKKNGKVRVCIDFR 616
Query: 380 DKN 382
D N
Sbjct: 617 DLN 619
>03_05_0325 +
23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 30.3 bits (65), Expect = 3.0
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 11/161 (6%)
Query: 177 KEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKESLETNKLKLS 236
KE L+G+ T + + A V +N N DIL + L + L
Sbjct: 374 KECLKGR-TLTLKLKTAAFEVRTRAVTTQNYINSKEDILIYARKLLKAELPLSLRLMGLR 432
Query: 237 ESNLGFEIEESVAK--KLVDNNIEVATKIN--DSNKKIVKPTT---NYYDNNFVLEDYLS 289
S L E ++S + K +D N +N + TT NY N DYL
Sbjct: 433 MSQLRDEKDDSSTQTQKTLDRFFRTPDNSNVIGANSPSIGNTTGGDNYCTNVMTKVDYLE 492
Query: 290 YKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRM 330
+ ++ D++ LHEKN +S+ NY+ S+ M
Sbjct: 493 HDSM---DDQALFLHEKNLFVPEGRSSDNYNNDAASSNPLM 530
>09_04_0175 - 15353903-15354005,15354189-15354280,15354408-15354553,
15354661-15354814,15354885-15354985,15355055-15355145,
15355146-15355378,15355501-15355736,15355839-15356066,
15356150-15356370,15356869-15356990,15357125-15357451,
15357616-15357754,15357822-15357901,15358478-15358678,
15359431-15359757,15360144-15360897
Length = 1184
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/82 (20%), Positives = 38/82 (46%)
Query: 49 RNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIP 108
+N +KT+ K+ + N T D+ +LS+ +LS G + + +P +E+
Sbjct: 1103 KNHNKKTRKLKKTASHQNTSTSSSDDAGYLSAPATVLSSGGNRSSLRKRSPRSRRQELEL 1162
Query: 109 KTTKIERAKAMNNEKKSKFKSK 130
+ + R +++ ++ K K
Sbjct: 1163 QPLTMSRNNGDQDDQLAEHKDK 1184
>03_01_0448 -
3444608-3444814,3446419-3446497,3446567-3446691,
3446765-3446809,3447070-3447165,3447344-3447417,
3447526-3447649,3447975-3448109,3448206-3448535,
3448610-3448762,3448840-3449391,3449569-3449648,
3450395-3450506,3450579-3450749,3450820-3450879
Length = 780
Score = 29.9 bits (64), Expect = 3.9
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 177 KEVLEGKKTKRVTIDEPATLVS-EHKANDKNLYNFFVDILETTFSACDMKESLETNKLKL 235
+E+ + + I PA + + EH + K L VD+L+ + E+ TNKL
Sbjct: 463 RELNQCEDDHETKIKSPAKIAAVEHSGHIKVL----VDMLQQLERSIQFMENKLTNKLLS 518
Query: 236 SE-----SNLGFEIEESVAKKLVDNNIEVA---------TKINDSNKKIVKPTTNYYDNN 281
E + L E E ++AK++ N E A T+ +D+NK I + +
Sbjct: 519 VEQICRKNTLAIEDETNLAKEIDGNGTEEAPFIITGDEATETDDNNKTIAERLRGSANLG 578
Query: 282 FVLEDYLSYKTVFKSDNRK 300
L+D ++ + +S+ K
Sbjct: 579 LTLKDKITINYILQSEKTK 597
>02_02_0190 -
7630282-7630287,7630383-7630547,7630641-7630691,
7630955-7631128,7631882-7632116,7632224-7632306,
7633826-7633866,7633986-7634067
Length = 278
Score = 29.9 bits (64), Expect = 3.9
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 26 KTLNDSALNVLPETKKKGIYVEKRNFAQKTQVTKRLKTLPNQITRRRD---NKQFLSSVL 82
K + A V +T G V+ ++ + Q K + P QIT + N Q L V
Sbjct: 159 KEAEEEAKKVPAKTFTPGQVVDAQDTTMEEQGPKVVAPTPEQITAIKAAIVNSQTLEEVA 218
Query: 83 NI---LSKGTTSTQFPEPAPDKSGEEIIPKTTKIE 114
+ LS G +F P PD + + +T K+E
Sbjct: 219 RLEKALSTGQIPAEFAIPKPDANMADASEETEKME 253
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 28.7 bits (61), Expect = 9.1
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 291 KTVFKSDNRKPKL----HEKNRLKSTPQSTS-NYSRFNKSTKKRMKSDFIDILKRELTNS 345
K FKS++ KP L EKN +KS+ + + + N++ K + D I + KR T
Sbjct: 399 KFSFKSNSTKPALDSSEQEKNAIKSSGSNKKHSKKKGNQNNKTVSEQDEIFLEKRNET-K 457
Query: 346 SLGSVEPQ 353
SLGS+ Q
Sbjct: 458 SLGSLGDQ 465
>05_02_0100 +
6594787-6594878,6595443-6595728,6595809-6595887,
6595964-6596013,6597281-6597478,6597555-6597612,
6598388-6598496,6599253-6599321,6599684-6599812,
6599970-6600082,6600386-6600479,6602827-6602917,
6604145-6604233,6604715-6604856,6605849-6606196,
6606314-6607408
Length = 1013
Score = 28.7 bits (61), Expect = 9.1
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 159 DQSRDVCKINSNNVTA-IAKEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDILET 217
D S+D+ I ++ AK+ L + I TLV D YN + ET
Sbjct: 802 DHSKDIDYIALGDINKDAAKQSLNRNIVEAEDIKCEGTLVDHTVVEDATPYN----VNET 857
Query: 218 TFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIE 258
+ SA + ++ +L E N G I S++ ++ D +I+
Sbjct: 858 SASADKINDNEHNVSSELKEGNNGNGITTSISCEMEDRSID 898
>04_04_1580 -
34576595-34576723,34576905-34576981,34577058-34577104,
34577864-34577964,34578114-34578203,34578647-34578763,
34578835-34578992,34579562-34579843,34580367-34580667
Length = 433
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 295 KSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSV 350
+SD K E ++ ++ S+ +++ N + + + ++ IL++ELTNS +G++
Sbjct: 255 RSDTESEKNDELDQTPASEPSSMSHNSANSTIRFNCR-EYRVILRKELTNSDVGNI 309
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,597,637
Number of Sequences: 37544
Number of extensions: 364695
Number of successful extensions: 822
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 816
Number of HSP's gapped (non-prelim): 14
length of query: 416
length of database: 14,793,348
effective HSP length: 84
effective length of query: 332
effective length of database: 11,639,652
effective search space: 3864364464
effective search space used: 3864364464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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