Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001676-TA|BGIBMGA001676-PA|undefined
(416 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.43
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_52702| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.99
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.99
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 31 1.3
SB_50114| Best HMM Match : DUF1168 (HMM E-Value=1.7) 31 1.3
SB_18672| Best HMM Match : F-box (HMM E-Value=0.002) 31 1.7
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27) 31 1.7
SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56) 31 2.3
SB_21621| Best HMM Match : FKBP_N (HMM E-Value=7.3) 31 2.3
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 31 2.3
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 30 4.0
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_33083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0) 29 5.3
SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10) 29 5.3
SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 5.3
SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0) 29 5.3
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 7.0
SB_54201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_20714| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.2
SB_44005| Best HMM Match : CUE (HMM E-Value=0.38) 29 9.2
SB_30395| Best HMM Match : zf-C2H2 (HMM E-Value=1.6) 29 9.2
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 9.2
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.2
SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26) 29 9.2
SB_303| Best HMM Match : SURF6 (HMM E-Value=5) 29 9.2
SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63) 29 9.2
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 29 9.2
SB_39539| Best HMM Match : VWA (HMM E-Value=1.8e-12) 29 9.2
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 29 9.2
SB_12474| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.2
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 33.1 bits (72), Expect = 0.43
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 215 LETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKI---- 270
+ET + A KE+ +L+ ++ +E ES +KL N+++ K+N NK+I
Sbjct: 1203 IETLYKASQDKENRMKQELQSYKNR--YEKLESDYRKLQQENVDLRAKVNALNKRIRDLE 1260
Query: 271 -VKPTTN----------YYDNNFVLEDYLSYKTVFKS-DNRKPKLHEKN-RLKSTPQSTS 317
K NN + + + + TV K D+ K +L + N RL +
Sbjct: 1261 AAKDRAEKEKQAIKEELVQANNDLADLEIEHDTVQKDYDSLKKQLADANERLAKAREENM 1320
Query: 318 NYSRFNKSTKKRMKSDFIDILKRE-LTNSSLGSVE-PQNFYQSLKF-IAKTKKANAKLKY 374
N + K R++S+ + +++ LT++ S E + +SLK ++K K N LK
Sbjct: 1321 NLQQQIVELKMRLESEERESAEKDNLTDNLQASKEYIEGQLESLKAQMSKIKDENENLKE 1380
Query: 375 ADEMRDK 381
+D R +
Sbjct: 1381 SDARRQQ 1387
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 33.1 bits (72), Expect = 0.43
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 5/142 (3%)
Query: 220 SACDMKESLETNKLKL--SESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNY 277
S CD ++L N++KL ++ N+ EE V + + + + + +
Sbjct: 216 SECDEFKALPFNEIKLLLNDENICVRSEEEVFEAALAWVNASEDRCKELAEILTCVRLPI 275
Query: 278 YDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDI 337
+++ E L+ +T+ D K + E S+P S ++ + RM + F D
Sbjct: 276 LSPSYLTEHVLTNETLLADDECKLMIDEAMLYASSPSSVKRQQVYHSRMQPRMPTGFADA 335
Query: 338 LKRE---LTNSSLGSVEPQNFY 356
L T +S+ S E N Y
Sbjct: 336 LVAVGGLYTGNSVASAERYNMY 357
>SB_52702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 31.9 bits (69), Expect = 0.99
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 64 LPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEK 123
LP+Q DN++ VL +++ G T P P P KS K K AK+ +
Sbjct: 3 LPSQAATAEDNRRLGVQVLRVVNGGVAPTGLPRP-PGKSRFPFARKKAKATEAKSTLPDI 61
Query: 124 KSKFKSKILNRNYDD 138
+ + ++N D
Sbjct: 62 RDTNDNALVNMRTTD 76
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 31.9 bits (69), Expect = 0.99
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 305 EKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDI--LKRELTNSSLGSVEPQNFYQSLKF- 361
E N+L S TS + + K++K R++SD I L S E N L F
Sbjct: 1918 ENNKLNSKLSETSTFLKDVKTSKTRLESDLSSIFQLYNMRPTQSPTEGESANSEAELDFG 1977
Query: 362 IAKTKKANAKLKYADEMRDKNPE 384
I+ + NAKLK E++D N E
Sbjct: 1978 ISSLVEENAKLKV--ELKDINVE 1998
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 31.5 bits (68), Expect = 1.3
Identities = 69/375 (18%), Positives = 149/375 (39%), Gaps = 27/375 (7%)
Query: 55 TQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIE 114
T++ +++++ N+IT + L N+L + + + DK +++ K +E
Sbjct: 411 TELEEKIRSQRNRITELERRVKELEKEKNLLEQQVKTMKNKSDDDDKKIKDLNEKVRVLE 470
Query: 115 RAKAMNNEKKSKFKSKILNRNYDDNFIVLKXXXXXXXXXXXLYSDQSRDVCKINSNNVTA 174
+ N+ + K N +D L+ Y ++ ++ N
Sbjct: 471 KQLKENDAEIQGLKDD--NERLEDE---LEDLSTTIKRGRAEYERILKENAELKDENEAL 525
Query: 175 IAK-EVLEGKKTKRVTIDEPATLVS-EHKANDKN----LYNFFVDI------LETTFSAC 222
A+ + L+ K + V + A + + E +DK L N ++ +E +
Sbjct: 526 KAEIDALKPKIEEEVVVQSAAPVAAGEPDFDDKEQLDMLENELREVKQKLEGVEKKYQQY 585
Query: 223 DMKESLETNKLKLSESNLGFEIE--ESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDN 280
++ E L+ NLG ++ E V KK +D+ ++ K + + K D
Sbjct: 586 REEKEPELKSLRDQVKNLGERLKDAEFVKKKQLDDLKKLQKKYDQMVEDFEKRIKILEDR 645
Query: 281 NFVLEDYLSYKTVFKSDNRKPKLHEKNRLKS-TPQSTSNYSRFNK--STKKRMKSDFIDI 337
+ L K + S +K + K ++K Q N +K + +++ + D+
Sbjct: 646 SEGQRKDLIDKEIVISQLKKDEAKNKIQIKRLEDQLADNKKEMDKGLALVNKLRDEIADL 705
Query: 338 LKRELTNSSLGSVEPQNFYQSLKFIAKTKKANAKLKYA-DEMRDKNPECVFKRRKIIAKS 396
KR + QN +SL+ K K ++++ DE+R+ + + K+ A+
Sbjct: 706 KKRLAAADDNDELMKQN--ESLR--KKVSKLEDEVRFLNDELREADSSSIKDTEKLNAEI 761
Query: 397 RKNRRNIVGSTKTLN 411
R+ ++ IV K ++
Sbjct: 762 REFKKKIVELEKLVD 776
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 226 ESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVLE 285
ESL+ N+ K E+ + ++ KL D + A KI + K V T + L+
Sbjct: 118 ESLKENQTKQQEA---LQESKNKISKLEDKLSQYAIKIAEHEKAAVSITKENHSMKKELQ 174
Query: 286 DYLSYKTVFKSDNRKPKLHEKNRLK 310
D L YK + S+ K + E+ K
Sbjct: 175 DALDYKDRYNSEVEKVAILEEEIAK 199
>SB_50114| Best HMM Match : DUF1168 (HMM E-Value=1.7)
Length = 269
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 64 LPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEK 123
LP+Q DN++ VL ++ G T P P P KS K K AK+ +
Sbjct: 3 LPSQAATAEDNRRLGVQVLRVVKGGVAPTGLPRP-PGKSRFPFARKKAKATEAKSTLPDI 61
Query: 124 KSKFKSKILNRNYDD 138
+ + ++N D
Sbjct: 62 RDTNDNALVNMRTTD 76
>SB_18672| Best HMM Match : F-box (HMM E-Value=0.002)
Length = 699
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Query: 233 LKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVLEDYLSYKT 292
++L + +G + + VD+ VA I ++ K+ K TT Y +LE +
Sbjct: 554 MRLCQRVIGESVFKFFGLSYVDHLSGVANLIVEATNKLRKETTE-YGKKELLEQIIEQLQ 612
Query: 293 VFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKR 329
K PK K +S QS + S N K +
Sbjct: 613 AAKEGRASPKKSRKTTQESLEQSDEDESDGNDEEKHK 649
>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
Length = 228
Score = 31.1 bits (67), Expect = 1.7
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 38 ETKKKGIYVEKRNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEP 97
+TKK+G EK+ A++ ++ K+L+ + + + K+ SK TS P+
Sbjct: 87 DTKKEGEMAEKKAKAKERKLQKQLEKEAAEEEKVKKPKKSRDGEKTKKSKKVTSE--PKS 144
Query: 98 APDKSGEEIIPKTTKIERAKAMNNEKKSKFKSK 130
K ++ KTTK AK+ + KS +K
Sbjct: 145 PKVKKSKDKSTKTTKKSDAKSPKKDAKSPTTTK 177
>SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56)
Length = 697
Score = 30.7 bits (66), Expect = 2.3
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 297 DNRKPKLHEKNRLKSTPQSTSNYSRFNKSTK-KRMKSDFIDILKRE-LTNSSLGSVEPQN 354
D+ E LK+T Q SN SR N++TK KSD D L E L L S +N
Sbjct: 95 DDEGENTPENMLLKATQQEPSNGSRNNENTKTTERKSDVSDSLGDEKLKIKDLQSSIHRN 154
Query: 355 FYQSLKFIAKTKKANAKLKYADEMRDKNPECVFKRRKI 392
+ + + AK + E+ + + V + ++I
Sbjct: 155 LVKLFHHLRHSASGRAKDEENKEVMKEKQDIVAEEKQI 192
>SB_21621| Best HMM Match : FKBP_N (HMM E-Value=7.3)
Length = 272
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 64 LPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNEK 123
LP+Q DN++ + VL +++ G +T P P KS K + + + +
Sbjct: 3 LPSQAATAEDNRRLGAQVLRVVNGGVATTGLPR-TPGKSRFTFAKKAKATDAKSTLPDIR 61
Query: 124 KSKFKSKILNRNYD 137
+K K+ + R D
Sbjct: 62 DTKKKAFVNQRTTD 75
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 30.7 bits (66), Expect = 2.3
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Query: 177 KEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKESLETNKLKLS 236
K++L +T + + E TL+ +HK L N + S + + LE L
Sbjct: 763 KDMLRNSET--MLMQENKTLLQQHKDQSSLLVNLQSLQNKLERSEFETRTRLEGQVEALQ 820
Query: 237 -ESNLG---FEIEESVAKKLV---DNNI-EVATKINDSNKKIVKPTTNYYDNNFVLEDYL 288
ESNL E++ + K L+ +N + E+ T+I+ ++ + N +E
Sbjct: 821 KESNLAKRQLEMDNTHHKNLIKTLENRVQELQTQIDTESRSNQQARDMLVRNTKEMERLE 880
Query: 289 SYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDI-LKRELTNSSL 347
T K+ + L P S + + K T+++ K+D D LK + + +
Sbjct: 881 FKNTEVKAQLEAAEKRVHELLSKEPSSDQDIDKMRKETEEKFKTDLQDTELKLKDAEAKI 940
Query: 348 GSVEPQ 353
+E Q
Sbjct: 941 KDLETQ 946
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 30.3 bits (65), Expect = 3.0
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 102 SGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNYDDNFIVLKXXXXXXXXXXXLYSD-- 159
+ E ++ K+T I+ K ++N + KS +++ +N +V +
Sbjct: 1422 NNEVVLAKSTNID--KLVSNNEVVLAKSTNIDKLVSNNEVVHAKSTNIDKLVSNNKGELA 1479
Query: 160 QSRDVCKINSNNVTAIAKEVLEGK--KTKRVTIDEPATLVSEHKANDKNLYNFFVDILET 217
+S ++ K+ SNN +AK K V D +T + + +N++ +I +
Sbjct: 1480 KSTNIDKLVSNNEVVLAKSTNIDKLVSNNEVEYDAKSTNIDKLVSNNEVELAKSTNI-DK 1538
Query: 218 TFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKI 270
S +++ + TN KL +N G + + KLV NN V K + +K +
Sbjct: 1539 LVSNNEVELAKSTNIDKLVSNNKGELAKSTNINKLVSNNEVVLAKSTNIDKLV 1591
>SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 29.9 bits (64), Expect = 4.0
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 8/163 (4%)
Query: 190 IDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKESLETNKLKLSESNLGFEIEESVA 249
+D+ L E K + D+ ET + K ++ K ++ E+ +++E+
Sbjct: 196 VDKDLDLSKEVNETKKEVQETKKDVQETKKEVHETKTKVDETKKEVQETKK--DVQET-K 252
Query: 250 KKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRL 309
K++ + EV D ++ K + D + E++ S K K D K E
Sbjct: 253 KEVQETKKEVQETKKDVHEVKGKVSEMAVDLASLKEEFSSRKVNSKKDITAAKGDE---- 308
Query: 310 KSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEP 352
+ TS+ + KK++ DFID L T +EP
Sbjct: 309 -AASGKTSHDPGNKRLPKKKVIQDFIDYLHLRYTTGEEVLIEP 350
>SB_52694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1450
Score = 29.9 bits (64), Expect = 4.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 91 STQFPEPAPDKSGEEIIPKTTKIERA 116
+T +PE P+K EE + TK+ERA
Sbjct: 517 ATAYPEAGPEKQTEETVSLGTKLERA 542
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 29.9 bits (64), Expect = 4.0
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 7/156 (4%)
Query: 204 DKNLYNFFVDILETTFSA-CDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATK 262
D L +V +L+ F D+ + ++ K ++ E+ + V ++ E++ K
Sbjct: 334 DTPLERDYVTLLKEWFDKDLDLSKEVDETKREVQETKTKVDETNKVVHEVKGKVSEISIK 393
Query: 263 INDSNKKIVKPTTNYYDNNFVLE----DYLSYKTVFKSD--NRKPKLHEKNRLKSTPQST 316
+++NK + + + + E D S K F S N K + ++ T
Sbjct: 394 TDETNKVVHEVKGKVSEISIKTEKMAVDLASLKEGFSSKKVNSKKDITATKGDEAASGKT 453
Query: 317 SNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEP 352
S+ KK+ DFID L T +EP
Sbjct: 454 SHDPGNESLPKKKAVQDFIDYLHLRYTKGEEVLIEP 489
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 29.9 bits (64), Expect = 4.0
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 5/166 (3%)
Query: 168 NSNNVTAIAKEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFF--VDILETTFSACDMK 225
NS++V+A K+ E +K KR + ++ E ++K L +++ S+ D +
Sbjct: 134 NSSDVSAKKKQCKEERKRKRHKLSCESSSCEESSDSEKRLKKEKNKEKQRDSSESSSDSE 193
Query: 226 ESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPTTNYYDNNFVLE 285
+ + K K+ + + + ++ L D+ + + K+I + +++ E
Sbjct: 194 DDRKRRKKKVKKDKK--QKAKDSSESLSDSEDDRERRKKKVKKEIKHKAKDSSESSIDSE 251
Query: 286 DYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMK 331
D K K N+K K H+ S+ + S+ S +KK K
Sbjct: 252 DDRERKER-KKKNKKEKKHKSKETSSSESNKSSDSEEKAKSKKNKK 296
>SB_33083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 307 NRLKSTPQSTSNYSR-FNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQS 358
N+L PQS Y R F+K K+ + SDF I ++ S+ GS + +QS
Sbjct: 171 NKLAPLPQSYKMYKRDFSKLDKEALLSDFQSINWIDVLPSNDGSKNVNDIFQS 223
>SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 712
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 318 NYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIAKTKKANAK 371
N++R K+++KR K+ +D+ +EL L EP++ + KF K K+ AK
Sbjct: 10 NWTR--KTSEKRQKNRRLDL--KELAIEELQDEEPESKFSLRKFSIKNKQKGAK 59
>SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10)
Length = 389
Score = 29.5 bits (63), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 95 PEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKFKSKILNRNY 136
P P+P SG I+ TK E A+ ++K + +I R Y
Sbjct: 169 PRPSPLFSGSMIVRNITKEELARMTPEDRKKPYVCEICGRRY 210
>SB_11236| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 365
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 356 YQSLKFIAKTKKANAKLKYADEMRDKNPECVFKR-RKIIAKSRKNRRNIV 404
Y + FIA+T K+ +L + D + EC +R ++ I K K +NI+
Sbjct: 208 YLQIYFIARTVKSTPRLVSDNSFSDSSDECERRRVQRCIRKRIKTTKNIL 257
>SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1457
Score = 29.5 bits (63), Expect = 5.3
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 318 NYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIAKTKKANAK 371
N++R K+++KR K+ +D+ +EL L EP++ + KF K K+ AK
Sbjct: 267 NWTR--KTSEKRQKNRRLDL--KELAIEELQDEEPESKFSLRKFSIKNKQKGAK 316
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 29.1 bits (62), Expect = 7.0
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 203 NDKNLYNFFVDILETTFSACDMKESLETNKLKLSESNLGF-EIEESVAKKLVD---NNIE 258
N+ N+ V++ E + C+ E++ N L + E+N E +V K V+ NN+
Sbjct: 3398 NNVNVCENNVNVCENNVNVCENNENVCENNLNVCENNENVCENNVNVCKNNVNMCKNNVN 3457
Query: 259 VA---TKINDSNKKIVKPTTNYYDNN 281
V + ++N+ + + N +NN
Sbjct: 3458 VCENNVNVCENNENVCENNLNVCENN 3483
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 303 LHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFI 362
+ E N LK S + +S +++K +LK++ + ++ + L+ +
Sbjct: 624 VEELNALKIQLNSANTELESTQSMNEKLKRKLRQLLKKK-GKTDEDDLDADAVREELEQV 682
Query: 363 AKTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNIV 404
K K + K+ A E+R + E V R KI+ + R+ +++V
Sbjct: 683 RKDKIESEKV--AQELRMELEEVVRNRDKIVGELREKMQHVV 722
>SB_54201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 29.1 bits (62), Expect = 7.0
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 294 FKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQ 353
F +N KP+ LK++PQ S + ST K+++S + ++ + E
Sbjct: 61 FDKEN-KPENKRTEPLKTSPQYDERNSSQHDSTGKKLES--VHTFTADMLAQKQAAAELN 117
Query: 354 NFYQSLKFIAKTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNIV 404
+ K I KT K L A E DK+ + + + I + KNR ++
Sbjct: 118 RQKEIEKKIKKTSKRTQDLLEAREY-DKSQQQKAELQGKIHATEKNREKVM 167
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 29.1 bits (62), Expect = 7.0
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 163 DVCKINSNNVTAIAKEVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSAC 222
D C+ N TAI + T R+T+ + T+ HK +N F ++LE
Sbjct: 429 DACE-TMGNATAICSDKTGTLTTNRMTVVQLYTMGQHHKTIPENPKEFSPELLEILCKGI 487
Query: 223 DMKESLETN 231
+ S +N
Sbjct: 488 ALNSSYASN 496
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 29.1 bits (62), Expect = 7.0
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 295 KSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQN 354
K+D ++PK + LK + T + R S K R ++D LK S G E Q
Sbjct: 190 KADRKRPKTTSLDELKRRSKKTRSPERRTMSAKTRSQNDEYSHLK-----SQYGMTEEQ- 243
Query: 355 FYQSLKFIAKTKKANAKLKYADEMRDK 381
LK + ++A AK K ++ R++
Sbjct: 244 ----LKIKRRREEAIAKRKKEEKEREE 266
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 29.1 bits (62), Expect = 7.0
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 224 MKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIV 271
M SL + KLKL + FE E K+L + E A KI SN KIV
Sbjct: 625 MSASLPSIKLKLPKRQESFENTEK--KRLSSSAAESALKIKVSNGKIV 670
>SB_20714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 295 KSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELT-NSSLGSVEPQ 353
+ + + + HEK+ +K +N SR+ K + ID+L+ T N + +
Sbjct: 417 RDEESEDQSHEKSMVKDHDIIVANCSRYISGDSAICKDEIIDLLRSTFTGNQVIRRQGIK 476
Query: 354 NFYQSLKFIAKTKKANAK 371
Y+ ++ + K +A+ K
Sbjct: 477 RCYEKVRNLRKAPEASKK 494
>SB_45487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 28.7 bits (61), Expect = 9.2
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 12/124 (9%)
Query: 226 ESLETNKLKLSESNLGFEIEESVAKKLVDNN---IEVATKINDSNKKIVKPTTNYYD--- 279
E+++ +K E+ G + E+ A +V + VA I D+ V P N+Y+
Sbjct: 107 ENVKAKAIKPEEAKEG-NVAEAKANSMVCQSKHCYNVAKIIKDALNTSVDPCDNFYEYAC 165
Query: 280 -----NNFVLEDYLSYKTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDF 334
NN V +L Y + + N K+ + P + N + + M D
Sbjct: 166 GSWVKNNDVPPSHLQYSRISELSNNNEKILMHALNNTEPNDSPNIKKVKTFFQSCMNVDA 225
Query: 335 IDIL 338
ID L
Sbjct: 226 IDHL 229
>SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)
Length = 761
Score = 28.7 bits (61), Expect = 9.2
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 33 LNVLPETKKKGIY--VEKRNFAQKTQVTKRLKTLPNQITRRRDNKQFLSSVLNI-LSKGT 89
L+VLP+TK KG Y E N + RL+ PN+ R + S ++ LS
Sbjct: 217 LDVLPKTKSKGSYCSCEGNNTRCTNEGIDRLEQSPNKCEARYSDISPSGSDSDVPLSSVA 276
Query: 90 TSTQFPEPA 98
+ +QF PA
Sbjct: 277 SFSQFRAPA 285
>SB_30395| Best HMM Match : zf-C2H2 (HMM E-Value=1.6)
Length = 755
Score = 28.7 bits (61), Expect = 9.2
Identities = 50/254 (19%), Positives = 98/254 (38%), Gaps = 10/254 (3%)
Query: 157 YSDQSRDVCKINSNNVTAIAK--EVLEGKKTKRVTIDEPATLVSEHKANDKNLYNFFVDI 214
+++QSR VCK+ V +I K +L+ K V + +
Sbjct: 101 FTEQSRRVCKVCKRRVDSIVKRQSILQQDKLSLVEKYNKSRFEGHCQVEKGGTPKRSPQR 160
Query: 215 LETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKLVDNNIEVATKINDSNKKIVKPT 274
+ +K T LK+ ES L +E + + ++ + +T ++D KPT
Sbjct: 161 FKRASKDSPLKHPNSTKALKIGESFLNYEDNDELGVCPLNEDHPASTVLHDHCYANRKPT 220
Query: 275 TNYYDNNFVLED--YLSY---KTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKR 329
+ + D +LS F+ + K+ + + S + + S++K
Sbjct: 221 FQQQQEDNITGDKSFLSSLLGNGYFEHEESNVKVRVEGATGNNDGPASQETISSSSSEKV 280
Query: 330 MKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIAKTKKANAKLKYADEMRDKNPECVFKR 389
S + L + T + V+ Q K++ T +AN + AD + + KR
Sbjct: 281 SVSVPLGCLPKNKTLNE-DMVDIMEHIQE-KYVPMT-QANGRKTPADFVCFGGDQLTEKR 337
Query: 390 RKIIAKSRKNRRNI 403
+ I K+R + R++
Sbjct: 338 VRNIQKARADGRDV 351
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 28.7 bits (61), Expect = 9.2
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 304 HEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDILKRELTNSSLGSVEPQNFYQSLKFIA 363
HEKN KS P S + N +K+R +S RE + S ++ ++
Sbjct: 96 HEKNEQKSQPNSPVDND--NSESKRRSRSRSFSWPPRERNSKSKSKSRSKSPVNTINGSL 153
Query: 364 KTKKANAKLKYADEMRDKNPECVFKRRKIIAKSRKNRRNIVGSTK 408
++K + + +++ K +C+ + K ++SR N ++ T+
Sbjct: 154 ESKVQSNEKDTDEKLSSKLLKCLKDKHK--SRSRSNSKDKAQDTE 196
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.7 bits (61), Expect = 9.2
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 168 NSNNVTAIAKEVLEG-KKTKRVTIDEPATLVSEHKANDKNLYNFFVDILETTFSACDMKE 226
+S+N T AKE +G + +KR+ I++ A + E + +N+ +FF E C+ K
Sbjct: 1657 DSSN-TVFAKENKDGPQNSKRMDIEQEAMEIDEDTSLQRNVSDFFEKSFEEI--RCERKR 1713
Query: 227 SLETNKLKLSESNLGFEIEESVAKKLVDNNIEV 259
+ ++ + +S LG ++ + L DN+ ++
Sbjct: 1714 ARDSLLAEDVQSVLGNSVK---PRNLEDNSEKI 1743
>SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26)
Length = 522
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 221 ACDMKESLETNKLKLSESNLGFEIEESVAK-KLVD--NNIE-VATKINDSNKKIVKPTTN 276
A ++K LE L+L E + E ++ +L D + +E V + + + N ++ K TN
Sbjct: 132 ALEVKHHLEDEILRLREYSSELESAAKTSQTELTDKYDKLESVLSYVLEENTRLSKDMTN 191
Query: 277 YYDNNFVLEDYLSYKTVFKSDNRKPKLHEKNRLKST 312
+ N +L+D+ + S PK E K T
Sbjct: 192 IREENKMLKDFSIKEVADGSTQMSPKAMEHELPKIT 227
>SB_303| Best HMM Match : SURF6 (HMM E-Value=5)
Length = 353
Score = 28.7 bits (61), Expect = 9.2
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 239 NLGFEIEESVAKKLV---DNNIEVATKINDSNKKIVKPTTNYYDNNFVLEDYLSYKTVFK 295
NL E+ E+ + L DN I+ AT + I + YDN+ VL+ Y ++
Sbjct: 259 NLASEVSEAFSGSLTTSCDNGIDCATPDQEMQALIEDKSVINYDNDTVLDFYKRNLYEYE 318
Query: 296 SDNRKPKLHEKNRLKS 311
S P + K RLK+
Sbjct: 319 SGVTPPVV--KGRLKA 332
>SB_58461| Best HMM Match : WH2 (HMM E-Value=0.63)
Length = 592
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 91 STQFPEPAPDKSGEEIIPKTTKIERAKAMNNEKKSKFKSK 130
+T P+ P+++ ++P T +E + N E +S+ K++
Sbjct: 176 TTTEPQVVPEETDNNLLPSTASVEMDSSFNTEVESESKAE 215
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 291 KTVFKSDNRKPKLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSD 333
KT + L RLK+TP +Y ++N S K+D
Sbjct: 1142 KTELPASEPASTLRRSTRLKTTPTHLKDYKKYNSSKATNEKAD 1184
>SB_39539| Best HMM Match : VWA (HMM E-Value=1.8e-12)
Length = 515
Score = 28.7 bits (61), Expect = 9.2
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 252 LVDNNIEVATKINDSNKKIVKP-----TTNYYDNNFVLEDYLSYKTVFKSDN-----RKP 301
L DN E A ++ D + P TN +NN + ED + DN P
Sbjct: 61 LDDNGPEAAGRMTDWSPYEDTPEDQEQNTNSTENNVIKEDVIGPTNAPSDDNDAYPTMPP 120
Query: 302 KLHEKNRLKSTPQSTSNYSRFNKSTKKRMKSDFIDI---LKRELTNSSLGSVEPQ 353
K++ KS +S NK +K + D+++I RE++ L + Q
Sbjct: 121 DEEPKDKHKSDIHKALEHSTANKQSKMTILIDYVNIDTRSTREISTKRLHQLNQQ 175
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 28.7 bits (61), Expect = 9.2
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 63 TLPNQITRRRDNKQFLSSVLNILSKGTTSTQFPEPAPDKSGEEIIPKTTKIERAKAMNNE 122
T PN T + SS NI TT++ PA +S + T ++ K+ +
Sbjct: 39 TKPNIETPKPTIWSASSSSSNIQKDATTNSTNQHPASSQSSNQEPVSDTNVKTCKSFSGV 98
Query: 123 KKSKFKSKILNRNYDDNFIV 142
+ SKF+ I +YD IV
Sbjct: 99 RSSKFRHII--GHYDKPNIV 116
>SB_12474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 28.7 bits (61), Expect = 9.2
Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 139 NFIVLKXXXXXXXXXXXLYSDQSRDVCKINSNNVTAIAKEVLEGKKTKRVTIDEPATLVS 198
NF++ + S +D+C++ +N + K +L +++ + T +
Sbjct: 359 NFVLSGSSEPECEKTTRIVSSICQDICRVTTNGEWKLPKHILLCTTIRQLYRSKQLTTII 418
Query: 199 EHKANDKNLYNFFVDILETTFSACDMKESLETNKLKLSESNLGFEIEESVAKKL 252
+ + Y+F V++ A D +++ + + E+ F I V KL
Sbjct: 419 SRLGHCET-YDFGVELETAVAKALDERDTSRSMHVDTPETLAPFHIYNRVGPKL 471
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.127 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,351,622
Number of Sequences: 59808
Number of extensions: 509325
Number of successful extensions: 1479
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1463
Number of HSP's gapped (non-prelim): 58
length of query: 416
length of database: 16,821,457
effective HSP length: 84
effective length of query: 332
effective length of database: 11,797,585
effective search space: 3916798220
effective search space used: 3916798220
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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