Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001675-TA|BGIBMGA001675-PA|IPR002893|Zinc finger,
MYND-type, IPR008191|Maternal tudor protein, IPR002999|Tudor
(2244 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 28 0.63
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 25 4.4
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 25 5.9
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 25 5.9
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 25 7.8
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 25 7.8
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 25 7.8
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 28.3 bits (60), Expect = 0.63
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Query: 2051 ELPAAPFDLQVLDEVG--LDSGNISGCPTNSDYVRYVMTKLPARMREYCESEFGRQPYLP 2108
E+P P+ L+VLD+ G + ++ NS RY++ +++ +E + +P
Sbjct: 894 EVPEVPYGLKVLDKSGRSVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTE---RVLVP 950
Query: 2109 AAE-ELCIAQLPPSSEWHRAVVLEQILGPGGGTARVLFLDHGNVAEVPVSALR 2160
+ E + L P++ +H +V E +G + V + V P +++R
Sbjct: 951 GDQTEAGVFTLRPATTYHIRIVAENEIGSSEPSETVTIITAEEVPGGPPTSIR 1003
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 25.4 bits (53), Expect = 4.4
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 1261 RLDKEELLKNS---IGNKLDVLAADNEAVEIETETIGVPLSEDDTNTKDVTDSTEAIPEN 1317
+L K E L+ + I + D+LA D V T +I P + DD +T + T +
Sbjct: 97 KLSKVETLRMAVEYIRSLEDLLALDESTVSSSTSSIPSPSTTDDLST-NPTPPPHYTYQI 155
Query: 1318 NNFELINEDVMIEKETPASDFNDNIIETSKTQSPHVSD 1355
+E +N D I + D + HVSD
Sbjct: 156 IPYEALNVDDHILSDPSLMDADLEFKGAQDLSLLHVSD 193
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 25.0 bits (52), Expect = 5.9
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 1447 PADWYCSRCAITPYCSQTCQTKDWTERHKSVCHYLAPLKTAGGFEAEATSSKSL 1500
P+DW C + PY S Q TE ++ P TAG A +S L
Sbjct: 49 PSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKP--TAGKRARTAYTSAQL 100
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 25.0 bits (52), Expect = 5.9
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 1447 PADWYCSRCAITPYCSQTCQTKDWTERHKSVCHYLAPLKTAGGFEAEATSSKSL 1500
P+DW C + PY S Q TE ++ P TAG A +S L
Sbjct: 40 PSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKP--TAGKRARTAYTSAQL 91
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 24.6 bits (51), Expect = 7.8
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 1092 NNNSLVHAIMNVTKKNNDKQSEDKRQTKEPNSNSDSSDDIFTADTSKNNDEIVNVTRTEA 1151
NNN+ A N T NN+ + P D DTS + +
Sbjct: 127 NNNNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSV 186
Query: 1152 SLQHDNLFSNINNILEQ-AIINVSKQNNDEQTKVEIFDEKTKENNDQSNN 1200
S++ +N ++ N+ ++ + +S + + + V++ K+ + NN
Sbjct: 187 SVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKL-SPKSASSLPPGNN 235
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 24.6 bits (51), Expect = 7.8
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 1092 NNNSLVHAIMNVTKKNNDKQSEDKRQTKEPNSNSDSSDDIFTADTSKNNDEIVNVTRTEA 1151
NNN+ A N T NN+ + P D DTS + +
Sbjct: 75 NNNNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSV 134
Query: 1152 SLQHDNLFSNINNILEQ-AIINVSKQNNDEQTKVEIFDEKTKENNDQSNN 1200
S++ +N ++ N+ ++ + +S + + + V++ K+ + NN
Sbjct: 135 SVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKL-SPKSASSLPPGNN 183
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 24.6 bits (51), Expect = 7.8
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 2/110 (1%)
Query: 1092 NNNSLVHAIMNVTKKNNDKQSEDKRQTKEPNSNSDSSDDIFTADTSKNNDEIVNVTRTEA 1151
NNN+ A N T NN+ + P D DTS + +
Sbjct: 258 NNNNTPSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRSNEDTSLHPSPRITKKANSV 317
Query: 1152 SLQHDNLFSNINNILEQ-AIINVSKQNNDEQTKVEIFDEKTKENNDQSNN 1200
S++ +N ++ N+ ++ + +S + + + V++ K+ + NN
Sbjct: 318 SVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKL-SPKSASSLPPGNN 366
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.315 0.131 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,434
Number of Sequences: 317
Number of extensions: 21217
Number of successful extensions: 55
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 41
Number of HSP's gapped (non-prelim): 16
length of query: 2244
length of database: 114,650
effective HSP length: 68
effective length of query: 2176
effective length of database: 93,094
effective search space: 202572544
effective search space used: 202572544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 51 (24.6 bits)
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