GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001673-TA|BGIBMGA001673-PA|undefined
         (172 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.40 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 17/59 (28%), Positives = 25/59 (42%)

Query: 22  NSIRTVGLPSNITRSVEDLPSVRINNLGYHNPRILEDKSKSSTVVPQQASIAASTGPSQ 80
           N  +  G     + +V   P V  N+    NPRI    S S++  P     AA+  PS+
Sbjct: 484 NGRKDSGYDGAASTAVIHEPVVETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSK 542


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)

Query: 100 LQFIAAHDRIINAWGHTS 117
           L   A  D  +  WGHTS
Sbjct: 284 LDSFAGSDVTVLGWGHTS 301


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.126    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,704
Number of Sequences: 429
Number of extensions: 1989
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 172
length of database: 140,377
effective HSP length: 54
effective length of query: 118
effective length of database: 117,211
effective search space: 13830898
effective search space used: 13830898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)