GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001672-TA|BGIBMGA001672-PA|undefined
         (206 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069642-1|AAL39787.1|  471|Drosophila melanogaster LD40802p pro...    29   4.5  
AL022018-2|CAA17685.2| 1279|Drosophila melanogaster EG:8D8.2 pro...    29   4.5  
AE014298-178|AAF45604.1| 1279|Drosophila melanogaster CG11409-PB...    29   4.5  
AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p pro...    28   7.9  
AE014297-3051|AAF55927.1|  254|Drosophila melanogaster CG6637-PA...    28   7.9  
AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA...    28   7.9  

>AY069642-1|AAL39787.1|  471|Drosophila melanogaster LD40802p
           protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 59  RNAISDALMKKQG-PNVIDRRVGIAALIQRRQDEGTQHPDPESDE 102
           R  +S  L  KQG P+ + + +G+ +  +RR DEG      E DE
Sbjct: 201 RIGVSTELAPKQGLPSELAKGLGVGSGFRRRSDEGDAEDLNEGDE 245


>AL022018-2|CAA17685.2| 1279|Drosophila melanogaster EG:8D8.2 protein.
          Length = 1279

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 59   RNAISDALMKKQG-PNVIDRRVGIAALIQRRQDEGTQHPDPESDE 102
            R  +S  L  KQG P+ + + +G+ +  +RR DEG      E DE
Sbjct: 1009 RIGVSTELAPKQGLPSELAKGLGVGSGFRRRSDEGDAEDLNEGDE 1053


>AE014298-178|AAF45604.1| 1279|Drosophila melanogaster CG11409-PB
            protein.
          Length = 1279

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 59   RNAISDALMKKQG-PNVIDRRVGIAALIQRRQDEGTQHPDPESDE 102
            R  +S  L  KQG P+ + + +G+ +  +RR DEG      E DE
Sbjct: 1009 RIGVSTELAPKQGLPSELAKGLGVGSGFRRRSDEGDAEDLNEGDE 1053


>AY061312-1|AAL28860.1|  647|Drosophila melanogaster LD23155p
           protein.
          Length = 647

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 12  VENTYATLATNVTKLQEKILNDLSWNVKLKLLNEYPSSK 50
           ++N Y  L   V +LQE IL   S  ++ ++ +EY   K
Sbjct: 386 IDNQYINLPNTVVELQELILRQQSELIQARVSSEYERQK 424


>AE014297-3051|AAF55927.1|  254|Drosophila melanogaster CG6637-PA
           protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 11/68 (16%)

Query: 77  RRVGIAALIQRR------QDEGTQHPDPESDENTMRLKLFRLMYETV---RDSDMKANKA 127
           RRVG+ A+ Q++      +D+GT   + + ++ T ++++FR+  E        D++ N  
Sbjct: 3   RRVGLGAIQQQKLAAEKYKDKGTDLQENQLEQMTKQMEVFRVKLEEFAMKHKEDIRKNS- 61

Query: 128 VQIRQQYQ 135
            Q R+Q+Q
Sbjct: 62  -QFRKQFQ 68


>AE013599-3127|AAF46670.2|  647|Drosophila melanogaster CG4030-PA
           protein.
          Length = 647

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 12  VENTYATLATNVTKLQEKILNDLSWNVKLKLLNEYPSSK 50
           ++N Y  L   V +LQE IL   S  ++ ++ +EY   K
Sbjct: 386 IDNQYINLPNTVVELQELILRQQSELIQARVSSEYERQK 424


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.132    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,880,252
Number of Sequences: 52641
Number of extensions: 393622
Number of successful extensions: 1054
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1052
Number of HSP's gapped (non-prelim): 6
length of query: 206
length of database: 24,830,863
effective HSP length: 82
effective length of query: 124
effective length of database: 20,514,301
effective search space: 2543773324
effective search space used: 2543773324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)