Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001672-TA|BGIBMGA001672-PA|undefined
(206 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 29 1.8
U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical p... 29 2.4
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 29 3.1
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 29 3.1
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 29 3.1
AF025467-7|AAB71036.2| 485|Caenorhabditis elegans X-box promote... 28 4.2
U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1 (de... 28 5.5
U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1 (de... 28 5.5
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75956-4|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 9.6
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 9.6
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 9.6
AF106579-3|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 9.6
AF106579-2|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 9.6
AF106579-1|AAC78200.4| 4889|Caenorhabditis elegans Kettin (droso... 27 9.6
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 9.6
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 9.6
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 20 ATNVTKLQEKILNDLSWNVKLKL-LNEYPSSKPSGGSPVLRNAISDALMKKQGPNVIDRR 78
A N+T Q ++NDL N+ ++ + + ++K G P+ N +S+AL++++ +
Sbjct: 839 AQNITLNQ--VVNDLLQNLDVRENVKVWFNNKIWPGFPIASNILSNALLRQEDYAIDPED 896
Query: 79 VGIAALIQRRQDEGTQHPDPESDENTMRLKLFRL 112
+GI + +Q D + + T L +FR+
Sbjct: 897 LGILTMNHPMNKTISQTLDQNALKFTQALAVFRI 930
>U41559-10|AAC24264.2| 371|Caenorhabditis elegans Hypothetical
protein C26B2.4 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 165 RLYREWKPLEHINAYEQIASQAIEISHLIDMA 196
R R+WKPLE +N S + I H +D A
Sbjct: 170 RFKRDWKPLEMLNLENFCRSWSRSIVHFLDFA 201
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 46 YPSSKPSGGSPVLRNAISDALMKKQGPNVI 75
+P S PS P+LR +++ +KK G +I
Sbjct: 664 FPESVPSNSIPLLRLSVAHVCLKKTGERII 693
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 99 ESDENTMRLKLFRLMYETVRDSDMKANKAVQIRQQYQNSTPFEVGYLIGDITDKYNVMID 158
E+D M L ++ + T+ +KA V + ++++TP G++ +N+M+D
Sbjct: 698 ENDAMRMTLDNYKKCFNTL----IKAGAKVDV-YDHEDNTPLHYALTNGNLM-LFNLMLD 751
Query: 159 IAATLKRLYREWKPLEHINAYEQIASQAIEI 189
A + L+ +W H N +I + +++
Sbjct: 752 KVANKRNLFEKW--ANHQNFLHEILALPMKV 780
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 99 ESDENTMRLKLFRLMYETVRDSDMKANKAVQIRQQYQNSTPFEVGYLIGDITDKYNVMID 158
E+D M L ++ + T+ +KA V + ++++TP G++ +N+M+D
Sbjct: 698 ENDAMRMTLDNYKKCFNTL----IKAGAKVDV-YDHEDNTPLHYALTNGNLM-LFNLMLD 751
Query: 159 IAATLKRLYREWKPLEHINAYEQIASQAIEI 189
A + L+ +W H N +I + +++
Sbjct: 752 KVANKRNLFEKW--ANHQNFLHEILALPMKV 780
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 99 ESDENTMRLKLFRLMYETVRDSDMKANKAVQIRQQYQNSTPFEVGYLIGDITDKYNVMID 158
E+D M L ++ + T+ +KA V + ++++TP G++ +N+M+D
Sbjct: 698 ENDAMRMTLDNYKKCFNTL----IKAGAKVDV-YDHEDNTPLHYALTNGNLM-LFNLMLD 751
Query: 159 IAATLKRLYREWKPLEHINAYEQIASQAIEI 189
A + L+ +W H N +I + +++
Sbjct: 752 KVANKRNLFEKW--ANHQNFLHEILALPMKV 780
>AF025467-7|AAB71036.2| 485|Caenorhabditis elegans X-box promoter
element regulatedprotein 7 protein.
Length = 485
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 170 WKPLEHINAYEQIASQAIEISH 191
W+P+ H + YE QAI+I +
Sbjct: 333 WRPISHNSLYEMFVGQAIDIDY 354
>U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform a protein.
Length = 839
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/81 (19%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 109 LFRLMYETVRDSDMKANKAVQIR-QQYQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLY 167
L+ L+ E V++ + ++ + + + Y ++ PF I DK++V +D ++++ Y
Sbjct: 396 LYSLVEEIVKEPFLNKSQVWRSKLESYFHTVPFYYNTQIRVCLDKFDVKVDYSSSMSMFY 455
Query: 168 REWKPLEHINAYEQIASQAIE 188
+ L ++N ++ A + ++
Sbjct: 456 -PGQLLSNLNRFKAKAREELD 475
>U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1
(deleted in cancer)homolog protein 1, isoform b protein.
Length = 842
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/81 (19%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 109 LFRLMYETVRDSDMKANKAVQIR-QQYQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLY 167
L+ L+ E V++ + ++ + + + Y ++ PF I DK++V +D ++++ Y
Sbjct: 399 LYSLVEEIVKEPFLNKSQVWRSKLESYFHTVPFYYNTQIRVCLDKFDVKVDYSSSMSMFY 458
Query: 168 REWKPLEHINAYEQIASQAIE 188
+ L ++N ++ A + ++
Sbjct: 459 -PGQLLSNLNRFKAKAREELD 478
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 46 YPSSKPSGGSPVLRNAISDALMKKQGPNVIDRRVGIAALIQRRQ 89
+P S P +P + S ++ P V+ R++G+ RRQ
Sbjct: 3884 FPPSGPLLATPSVLTMSSSSMTANVMPTVVTRKIGVVRRASRRQ 3927
>Z75956-4|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 46 YPSSKPSGGSPVLRNAISDALMKKQGPNVIDRRVGIAALIQRRQ 89
+P S P +P + S ++ P V+ R++G+ RRQ
Sbjct: 3884 FPPSGPLLATPSVLTMSSSSMTANVMPTVVTRKIGVVRRASRRQ 3927
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 87 RRQDEGTQHPDPESDENTMRLKLFRLMYETVRDSDMKANKAVQIR 131
R ++ S T +FRL Y R++D ++++ VQI+
Sbjct: 226 RNRNRSESSSTMSSQSRTEHAPIFRLQYNYQREADNRSSRLVQIQ 270
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 22 NVTKLQEKILNDLSWNVKLKLLNEYPSSKP 51
NV K ND W+VK KLL P + P
Sbjct: 18 NVRKFLAVTQNDFIWDVKRKLLATLPQALP 47
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 22 NVTKLQEKILNDLSWNVKLKLLNEYPSSKP 51
NV K ND W+VK KLL P + P
Sbjct: 18 NVRKFLAVTQNDFIWDVKRKLLATLPQALP 47
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 134 YQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLYREWKPLEHINAYEQIASQAIEI 189
+ N P + I D V++DIA T R EWK + A E +++ IE+
Sbjct: 2580 FLNGEPMSASSRVKMINDFGWVIMDIAQTEPRDSGEWKCVAKNAAGEAVSTATIEV 2635
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 134 YQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLYREWKPLEHINAYEQIASQAIEI 189
+ N P + I D V++DIA T R EWK + A E +++ IE+
Sbjct: 2497 FLNGEPMSASSRVKMINDFGWVIMDIAQTEPRDSGEWKCVAKNAAGEAVSTATIEV 2552
>AF106579-3|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 134 YQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLYREWKPLEHINAYEQIASQAIEI 189
+ N P + I D V++DIA T R EWK + A E +++ IE+
Sbjct: 2818 FLNGEPMSASSRVKMINDFGWVIMDIAQTEPRDSGEWKCVAKNAAGEAVSTATIEV 2873
>AF106579-2|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 134 YQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLYREWKPLEHINAYEQIASQAIEI 189
+ N P + I D V++DIA T R EWK + A E +++ IE+
Sbjct: 2818 FLNGEPMSASSRVKMINDFGWVIMDIAQTEPRDSGEWKCVAKNAAGEAVSTATIEV 2873
>AF106579-1|AAC78200.4| 4889|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4889
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 134 YQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLYREWKPLEHINAYEQIASQAIEI 189
+ N P + I D V++DIA T R EWK + A E +++ IE+
Sbjct: 3219 FLNGEPMSASSRVKMINDFGWVIMDIAQTEPRDSGEWKCVAKNAAGEAVSTATIEV 3274
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 46 YPSSKPSGGSPVLRNAISDALMKKQGPNVIDRRVGIAALIQRRQ 89
+P S P +P + S ++ P V+ R++G+ RRQ
Sbjct: 3884 FPPSGPLLATPSVLTMSSSSMTANVMPTVVTRKIGVVRRASRRQ 3927
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 134 YQNSTPFEVGYLIGDITDKYNVMIDIAATLKRLYREWKPLEHINAYEQIASQAIEI 189
+ N P + I D V++DIA T R EWK + A E +++ IE+
Sbjct: 2513 FLNGEPMSASSRVKMINDFGWVIMDIAQTEPRDSGEWKCVAKNAAGEAVSTATIEV 2568
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,932,989
Number of Sequences: 27539
Number of extensions: 197847
Number of successful extensions: 550
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 529
Number of HSP's gapped (non-prelim): 27
length of query: 206
length of database: 12,573,161
effective HSP length: 78
effective length of query: 128
effective length of database: 10,425,119
effective search space: 1334415232
effective search space used: 1334415232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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