BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001671-TA|BGIBMGA001671-PA|undefined (244 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 30 2.0 SB_46063| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00015) 29 4.7 SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1 >SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) Length = 2084 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Query: 25 INLFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKIKLEGADLFSALLIINTT---- 80 ++L LKT+ R + PG +R L + + + + + E ++L+ L + + ++ Sbjct: 1230 VHLLLKTNSREIKPG-LRFLVVCGEANDVADLTRQKEDLELQIPTLKAKVSLLKKACKEK 1288 Query: 81 SDIIQDTNQRLSELQY 96 D I+ N+ + EL++ Sbjct: 1289 DDFIEKLNEEIKELRH 1304 >SB_46063| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00015) Length = 798 Score = 28.7 bits (61), Expect = 4.7 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Query: 35 HLSPGTVRSLALSNARSGLTQTSEKTEKIKLEGADLFSALLIINTTSDIIQDTNQRLSEL 94 +L P ++ SL L N RS + E KL AD+ S + SD I D+ L + Sbjct: 136 YLRPASIPSLLLCNVRSVAPKIGELDCVAKLNRADVLS--VTETWLSDDIPDSAVSLQDY 193 Query: 95 QYIRQDNVN 103 R+D N Sbjct: 194 ILFRKDRPN 202 >SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1427 Score = 27.9 bits (59), Expect = 8.1 Identities = 12/36 (33%), Positives = 20/36 (55%) Query: 193 YPTMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHP 228 + ++ K+R +F R K++NK L P+ PK P Sbjct: 59 FEAIKKGKRRNLFGSFRRKKSKNKLLPEPSSYPKSP 94 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.316 0.133 0.400 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,235,721 Number of Sequences: 59808 Number of extensions: 310269 Number of successful extensions: 670 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 669 Number of HSP's gapped (non-prelim): 3 length of query: 244 length of database: 16,821,457 effective HSP length: 80 effective length of query: 164 effective length of database: 12,036,817 effective search space: 1974037988 effective search space used: 1974037988 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 59 (27.9 bits)
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