GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001671-TA|BGIBMGA001671-PA|undefined
         (244 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6D4F Cluster: PREDICTED: similar to CG10617-PA...    36   0.70 
UniRef50_UPI000023E923 Cluster: hypothetical protein FG08961.1; ...    35   2.1  
UniRef50_A6TRV1 Cluster: Putative methyltransferase; n=2; Clostr...    34   2.8  
UniRef50_Q7RLW6 Cluster: DNA-directed RNA polymerase III; n=5; P...    34   2.8  
UniRef50_Q187H1 Cluster: Putative uncharacterized protein; n=2; ...    34   3.7  
UniRef50_Q8I5T0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q01550 Cluster: Tanabin; n=3; Xenopus|Rep: Tanabin - Xe...    33   4.9  
UniRef50_A0AXU3 Cluster: MoeA domain protein, domain I and II; n...    33   6.5  

>UniRef50_UPI0000DB6D4F Cluster: PREDICTED: similar to CG10617-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG10617-PA - Apis mellifera
          Length = 991

 Score = 36.3 bits (80), Expect = 0.70
 Identities = 18/55 (32%), Positives = 30/55 (54%)

Query: 58  EKTEKIKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYI 112
           +KT   K E + +F+  +I N  S I+Q+   RL+  +      VN+ P+ VG+I
Sbjct: 904 KKTSVKKGEESPIFNEAIIFNVPSHIMQNIQIRLTVAEVSNDQGVNSKPYSVGHI 958


>UniRef50_UPI000023E923 Cluster: hypothetical protein FG08961.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG08961.1 - Gibberella zeae PH-1
          Length = 276

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 9   DGKLIKHEETALYEAGINLFLKTDGRHLS-PGTVRSL-ALSNARSGLTQTS---EKTEKI 63
           DGKL   + TA+   G +    T  +  +  GT+ S+ +++N  S L QTS   E    +
Sbjct: 101 DGKLSWRDRTAIGLFGQDQIKSTSSQLQNCKGTLTSVVSIANLHSSLQQTSAIEEMMRMV 160

Query: 64  KLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKY 120
            ++G ++  A   ++TT   + + + RL +LQ      V   P E      V  EK+
Sbjct: 161 SIKGTEIAKA---VSTTERQLDEVSARLEKLQLALLQEVKEDPEERSAKDQVETEKF 214


>UniRef50_A6TRV1 Cluster: Putative methyltransferase; n=2;
           Clostridiaceae|Rep: Putative methyltransferase -
           Alkaliphilus metalliredigens QYMF
          Length = 187

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 47  SNARSGLTQTSEKTEKIKLEGADL-FSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTP 105
           S+ + G+TQ  E+     +   D  +   LI+ T + I+Q++  +   +  +  +N++  
Sbjct: 98  SDVQRGMTQLKERRYHADIIFMDPPYGKDLIVPTIAGIVQNSLLQDQGMIIVEHENLDEV 157

Query: 106 PFEVGYITYVIQEKYRKMVDKYNTS 130
           P E+G++T   Q+ Y K    + T+
Sbjct: 158 PAEIGHLTLFRQKNYGKTTISFYTT 182


>UniRef50_Q7RLW6 Cluster: DNA-directed RNA polymerase III; n=5;
           Plasmodium (Vinckeia)|Rep: DNA-directed RNA polymerase
           III - Plasmodium yoelii yoelii
          Length = 595

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 55  QTSEKTEKIKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNT--PPFEVGYI 112
           QT E T+  K E  D FSA  I+    ++ ++T      ++Y R +N+N   P F + + 
Sbjct: 215 QTKEHTKSNK-EKDDNFSAYQIVK---ELTKNTFNPNKIIKYKRIENLNNIFPSFRIEFE 270

Query: 113 TYVIQEKYRKMVDKYN 128
            + I  KY ++  KYN
Sbjct: 271 QFYINNKYLELYKKYN 286


>UniRef50_Q187H1 Cluster: Putative uncharacterized protein; n=2;
           Bacteria|Rep: Putative uncharacterized protein -
           Clostridium difficile (strain 630)
          Length = 348

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 176 FGSPYNDAVTKQHFSINYPTMRSTKKRKMFNMKRFWK 212
           +GS + D V  + FSINYP ++   +R ++ MK+F++
Sbjct: 62  YGSGFVDNVA-EFFSINYPDLKGFNRRGLYRMKQFYE 97


>UniRef50_Q8I5T0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 735

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 5   KDKRDGK-LIKHEETALYEAGINLFLKTDGRHLSPGTVRSLALSN 48
           K+KR+    IK++   + + G N+FL+   RH   GTV+++ ++N
Sbjct: 161 KEKRENNNTIKYKNNIIEDEGNNIFLQKGYRHTQNGTVQNMKITN 205


>UniRef50_Q01550 Cluster: Tanabin; n=3; Xenopus|Rep: Tanabin -
           Xenopus laevis (African clawed frog)
          Length = 1744

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%)

Query: 9   DGKLIKH--EETALYEAGINLFLKTDGRHLSPGTVRSLALSNARSGLTQTS-EKTEKIKL 65
           DG+L++   +E  + ++   L L     H    T  S+A+ + R        +K+ +I +
Sbjct: 760 DGELVQMATDENIINQSSDQLLLSDHSHHEETKTSESIAVEHNRMESEHAEVDKSSEIPV 819

Query: 66  EGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVN 103
           E ++  S   II+  SD+ +DT Q   + +   Q N N
Sbjct: 820 EISENVSVEEIIHEISDVEEDTKQAFEDERVGEQINQN 857


>UniRef50_A0AXU3 Cluster: MoeA domain protein, domain I and II; n=2;
           Burkholderia cenocepacia|Rep: MoeA domain protein,
           domain I and II - Burkholderia cenocepacia (strain
           HI2424)
          Length = 693

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)

Query: 83  IIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRKMVDKYN 128
           ++Q    R+S ++YI   ++  PP EV    Y  Q+K  +   +Y+
Sbjct: 246 VLQRWGYRVSSIEYIEPPDMTLPPLEVQQNEYAFQKKLAEFAQRYD 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,706,673
Number of Sequences: 1657284
Number of extensions: 10178222
Number of successful extensions: 25653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 25651
Number of HSP's gapped (non-prelim): 8
length of query: 244
length of database: 575,637,011
effective HSP length: 99
effective length of query: 145
effective length of database: 411,565,895
effective search space: 59677054775
effective search space used: 59677054775
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 71 (32.7 bits)