GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001671-TA|BGIBMGA001671-PA|undefined
         (244 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    27   0.50 
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    27   0.50 
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   8.2  

>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 27  LFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKIKLEGADLFSALLIINTTSDII 84
           L+    G HLS   VR L +++ R    +T    +++++ G D+ S   + NT  D +
Sbjct: 200 LYTTESGIHLSRFYVRDLEVNDLRYLSKETKACRDRVRMSGCDVCSE--VYNTHRDCL 255


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 27  LFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKIKLEGADLFSALLIINTTSDII 84
           L+    G HLS   VR L +++ R    +T    +++++ G D+ S   + NT  D +
Sbjct: 200 LYTTESGIHLSRFYVRDLEVNDLRYLSKETKACRDRVRMSGCDVCSE--VYNTHRDCL 255


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 177 GSP-YNDAVTKQHFSINYPTMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHPKKMWD 233
           G+P  +D    + F   + T+R T+ R+     R  K  N+T+   +      +K++D
Sbjct: 75  GNPNLSDRDLARKFGATHSTVRRTRLREGIKSYRASKQSNRTIKQNSLIKTRARKLYD 132


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,470
Number of Sequences: 2123
Number of extensions: 9781
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 3
length of query: 244
length of database: 516,269
effective HSP length: 62
effective length of query: 182
effective length of database: 384,643
effective search space: 70005026
effective search space used: 70005026
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)