Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001671-TA|BGIBMGA001671-PA|undefined
(244 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110585-1|AAI10586.1| 975|Homo sapiens ring finger protein 20 ... 30 6.4
BC110584-1|AAI10585.1| 975|Homo sapiens ring finger protein 20 ... 30 6.4
AL591377-3|CAH69963.1| 977|Homo sapiens ring finger protein 20 ... 30 6.4
AL353621-9|CAI14618.1| 977|Homo sapiens ring finger protein 20 ... 30 6.4
AK022532-1|BAB14081.1| 975|Homo sapiens protein ( Homo sapiens ... 30 6.4
AK022300-1|BAB14005.1| 746|Homo sapiens protein ( Homo sapiens ... 30 6.4
AK002051-1|BAA92057.1| 333|Homo sapiens protein ( Homo sapiens ... 30 6.4
AF265230-1|AAK58539.1| 975|Homo sapiens RING finger protein 20 ... 30 6.4
AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily mot... 30 8.5
>BC110585-1|AAI10586.1| 975|Homo sapiens ring finger protein 20
protein.
Length = 975
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 777 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 836
Query: 123 MVD 125
++
Sbjct: 837 AME 839
>BC110584-1|AAI10585.1| 975|Homo sapiens ring finger protein 20
protein.
Length = 975
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 777 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 836
Query: 123 MVD 125
++
Sbjct: 837 AME 839
>AL591377-3|CAH69963.1| 977|Homo sapiens ring finger protein 20
protein.
Length = 977
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 779 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 838
Query: 123 MVD 125
++
Sbjct: 839 AME 841
>AL353621-9|CAI14618.1| 977|Homo sapiens ring finger protein 20
protein.
Length = 977
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 779 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 838
Query: 123 MVD 125
++
Sbjct: 839 AME 841
>AK022532-1|BAB14081.1| 975|Homo sapiens protein ( Homo sapiens
cDNA FLJ12470 fis, clone NT2RM1000885, weakly similar to
HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
).
Length = 975
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 777 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 836
Query: 123 MVD 125
++
Sbjct: 837 AME 839
>AK022300-1|BAB14005.1| 746|Homo sapiens protein ( Homo sapiens
cDNA FLJ12238 fis, clone MAMMA1001260, weakly similar to
HYPOTHETICAL 97.1 KD PROTEIN R05D3.4 IN CHROMOSOME III.
).
Length = 746
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 548 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 607
Query: 123 MVD 125
++
Sbjct: 608 AME 610
>AK002051-1|BAA92057.1| 333|Homo sapiens protein ( Homo sapiens
cDNA FLJ11189 fis, clone PLACE1007547. ).
Length = 333
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 135 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 194
Query: 123 MVD 125
++
Sbjct: 195 AME 197
>AF265230-1|AAK58539.1| 975|Homo sapiens RING finger protein 20
protein.
Length = 975
Score = 30.3 bits (65), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%)
Query: 63 IKLEGADLFSALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEVGYITYVIQEKYRK 122
+K E +L +L + T D ++L E +++ Q N+ T E+G T ++ RK
Sbjct: 777 LKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNKRK 836
Query: 123 MVD 125
++
Sbjct: 837 AME 839
>AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily motor
KIF4 protein.
Length = 1232
Score = 29.9 bits (64), Expect = 8.5
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Query: 13 IKHEETALYEAGINLFLKTDGR-HLSPGTVRSLALSNARSGLTQTSEKTEKIKLEGADLF 71
+ E A A I+ ++ + + SP T RS + L Q E ++L
Sbjct: 476 LSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQHALRQAQMSKELVELN----- 530
Query: 72 SALLIINTTSDIIQDTNQRLSELQYIRQDNVNTPPFEV 109
AL + + + + +L +QY QDN+ P EV
Sbjct: 531 KALALKEALARKMTQNDSQLQPIQYQYQDNIKEPELEV 568
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,696,162
Number of Sequences: 224733
Number of extensions: 1281746
Number of successful extensions: 2556
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2540
Number of HSP's gapped (non-prelim): 17
length of query: 244
length of database: 73,234,838
effective HSP length: 88
effective length of query: 156
effective length of database: 53,458,334
effective search space: 8339500104
effective search space used: 8339500104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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