GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001671-TA|BGIBMGA001671-PA|undefined
         (244 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014926-1|AAT47777.1|  742|Drosophila melanogaster AT12465p pro...    32   0.83 
BT011397-1|AAR96189.1|  998|Drosophila melanogaster AT24804p pro...    32   0.83 
U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic ini...    30   3.4  
BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p pro...    30   3.4  
AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha k...    30   3.4  
AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA...    30   3.4  
AY119510-1|AAM50164.1|  998|Drosophila melanogaster GH12664p pro...    29   4.4  
AE014297-4541|AAN14216.1|  742|Drosophila melanogaster CG31025-P...    29   4.4  
AE014297-4540|AAF57010.4|  998|Drosophila melanogaster CG31025-P...    29   4.4  
AY047505-1|AAK77237.1|  450|Drosophila melanogaster GH01524p pro...    29   5.9  
AE014296-1439|AAN12004.1|  416|Drosophila melanogaster CG7176-PF...    29   5.9  
AE014296-1438|AAN12003.1|  416|Drosophila melanogaster CG7176-PE...    29   5.9  
AE014296-1437|AAF50435.1|  416|Drosophila melanogaster CG7176-PA...    29   5.9  
AE014296-1436|AAN12002.1|  437|Drosophila melanogaster CG7176-PD...    29   5.9  
AE014296-1435|AAF50434.1|  469|Drosophila melanogaster CG7176-PC...    29   5.9  
AE014296-1434|AAO41266.1|  450|Drosophila melanogaster CG7176-PG...    29   5.9  
AE014296-1433|AAF50433.1|  450|Drosophila melanogaster CG7176-PB...    29   5.9  

>BT014926-1|AAT47777.1|  742|Drosophila melanogaster AT12465p
           protein.
          Length = 742

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 195 TMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHPKKMWDLD 235
           T R TKKR+   +KR +K+R  ++Y PT++PK    + D D
Sbjct: 305 TPRKTKKRRP-KVKRPYKSRYYSMYRPTERPKANVAIPDAD 344


>BT011397-1|AAR96189.1|  998|Drosophila melanogaster AT24804p
           protein.
          Length = 998

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 195 TMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHPKKMWDLD 235
           T R TKKR+   +KR +K+R  ++Y PT++PK    + D D
Sbjct: 561 TPRKTKKRRP-KVKRPYKSRYYSMYRPTERPKANVAIPDAD 600


>U80223-1|AAC47516.1| 1589|Drosophila melanogaster eukaryotic
            initiation factor eIF-2 alpha kinase protein.
          Length = 1589

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 4    DKDKRDGKLIKHEETALYEAGINLFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKI 63
            D+  R+ ++        Y+   ++   T G HL    + SLA     S L +  EK   I
Sbjct: 1050 DRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDAELLSLAF-EITSELPRLREKNLAI 1108

Query: 64   KLEGADLFSALLI 76
            ++   +L  A+LI
Sbjct: 1109 RMNHTNLLRAILI 1121


>BT010047-1|AAQ22516.1| 1312|Drosophila melanogaster LD22885p
           protein.
          Length = 1312

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 4   DKDKRDGKLIKHEETALYEAGINLFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKI 63
           D+  R+ ++        Y+   ++   T G HL    + SLA     S L +  EK   I
Sbjct: 773 DRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDAELLSLAF-EITSELPRLREKNLAI 831

Query: 64  KLEGADLFSALLI 76
           ++   +L  A+LI
Sbjct: 832 RMNHTNLLRAILI 844


>AF056302-1|AAC13490.1| 1589|Drosophila melanogaster eIF-2alpha kinase
            protein.
          Length = 1589

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 4    DKDKRDGKLIKHEETALYEAGINLFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKI 63
            D+  R+ ++        Y+   ++   T G HL    + SLA     S L +  EK   I
Sbjct: 1050 DRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDAELLSLAF-EITSELPRLREKNLAI 1108

Query: 64   KLEGADLFSALLI 76
            ++   +L  A+LI
Sbjct: 1109 RMNHTNLLRAILI 1121


>AE014297-4744|AAF57150.1| 1589|Drosophila melanogaster CG1609-PA
            protein.
          Length = 1589

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 4    DKDKRDGKLIKHEETALYEAGINLFLKTDGRHLSPGTVRSLALSNARSGLTQTSEKTEKI 63
            D+  R+ ++        Y+   ++   T G HL    + SLA     S L +  EK   I
Sbjct: 1050 DRVYREERVFNFHPKQSYDCSFDIIAPTTGSHLVDAELLSLAF-EITSELPRLREKNLAI 1108

Query: 64   KLEGADLFSALLI 76
            ++   +L  A+LI
Sbjct: 1109 RMNHTNLLRAILI 1121


>AY119510-1|AAM50164.1|  998|Drosophila melanogaster GH12664p
           protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 195 TMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHPKKMWDLD 235
           T R  KKR+   +KR +K+R  ++Y PT++PK    + D D
Sbjct: 561 TPRKMKKRRP-KVKRPYKSRYYSMYRPTERPKANVAIPDAD 600


>AE014297-4541|AAN14216.1|  742|Drosophila melanogaster CG31025-PB,
           isoform B protein.
          Length = 742

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 195 TMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHPKKMWDLD 235
           T R  KKR+   +KR +K+R  ++Y PT++PK    + D D
Sbjct: 305 TPRKMKKRRP-KVKRPYKSRYYSMYRPTERPKANVAIPDAD 344


>AE014297-4540|AAF57010.4|  998|Drosophila melanogaster CG31025-PA,
           isoform A protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 195 TMRSTKKRKMFNMKRFWKNRNKTLYGPTKKPKHPKKMWDLD 235
           T R  KKR+   +KR +K+R  ++Y PT++PK    + D D
Sbjct: 561 TPRKMKKRRP-KVKRPYKSRYYSMYRPTERPKANVAIPDAD 600


>AY047505-1|AAK77237.1|  450|Drosophila melanogaster GH01524p
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 96  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 133


>AE014296-1439|AAN12004.1|  416|Drosophila melanogaster CG7176-PF,
           isoform F protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 62  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 99


>AE014296-1438|AAN12003.1|  416|Drosophila melanogaster CG7176-PE,
           isoform E protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 62  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 99


>AE014296-1437|AAF50435.1|  416|Drosophila melanogaster CG7176-PA,
           isoform A protein.
          Length = 416

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 62  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 99


>AE014296-1436|AAN12002.1|  437|Drosophila melanogaster CG7176-PD,
           isoform D protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 83  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 120


>AE014296-1435|AAF50434.1|  469|Drosophila melanogaster CG7176-PC,
           isoform C protein.
          Length = 469

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 115 EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 152


>AE014296-1434|AAO41266.1|  450|Drosophila melanogaster CG7176-PG,
           isoform G protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 96  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 133


>AE014296-1433|AAF50433.1|  450|Drosophila melanogaster CG7176-PB,
           isoform B protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 182 DAVTKQHFSINYPTMRSTKKR-KMFNMKRFWKNRNKTL 218
           +A+ K +  I   T+   +KR + FN+K+ WK+ N T+
Sbjct: 96  EAIKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTI 133


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,807,471
Number of Sequences: 52641
Number of extensions: 450124
Number of successful extensions: 1013
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1013
Number of HSP's gapped (non-prelim): 17
length of query: 244
length of database: 24,830,863
effective HSP length: 83
effective length of query: 161
effective length of database: 20,461,660
effective search space: 3294327260
effective search space used: 3294327260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)