Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001670-TA|BGIBMGA001670-PA|IPR007087|Zinc finger,
C2H2-type, IPR008081|Cytoplasmic fragile X mental retardation protein
interacting protein, IPR010996|DNA polymerase beta, N-terminal-like
(1615 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 50 2e-07
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 45 4e-06
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 44 6e-06
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 36 0.002
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 35 0.005
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 34 0.007
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 32 0.037
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 29 0.20
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 27 1.4
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 24 7.4
AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochr... 24 9.7
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 49.6 bits (113), Expect = 2e-07
Identities = 42/148 (28%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 255 QKKHQCRICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLKFLHSGRRP 313
QK + CRIC +SY R LK H H Y C C + F + H++ HSG +P
Sbjct: 247 QKPNVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR-THSGEKP 305
Query: 314 -------RTLYKILNIGT-------ERLYLCRFCDESSVDKRLIEKHTQLLPDLSNRAMT 359
R + ++ T ER Y CR C ++ D + KH R +
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHL--------RIHS 357
Query: 360 GYRDFYFCDQCMRKFSTETDMLQHKWTH 387
G + Y C C+ +FS ++ +H H
Sbjct: 358 GEKP-YECKLCLLRFSQSGNLNRHMRVH 384
Score = 45.6 bits (103), Expect = 3e-06
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 209 ICNYCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQHRHKACRIQKKHQCR 261
+C C K + K H++ H C C FS H + +K +C
Sbjct: 251 VCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAH-VRTHSGEKPFRCP 309
Query: 262 ICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLKFLHSGRRP 313
+C+ + + + H H Y C +CK+ F + HL+ +HSG +P
Sbjct: 310 VCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLR-IHSGEKP 361
Score = 35.5 bits (78), Expect = 0.003
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 15/130 (11%)
Query: 132 CNICEKSY--PTEKK--LLKHQDKKHMIVYERPK---KRVSFSDHVIVHEVKEYHKCRKC 184
C IC KSY P+ K L H +K + K + + + HV H ++ +C C
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 311
Query: 185 PKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH-------CDVCGLL 237
+ F + Y C C K F D H+++H C +C L
Sbjct: 312 DRRFSQ-SSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLR 370
Query: 238 FSSKLKYLQH 247
FS +H
Sbjct: 371 FSQSGNLNRH 380
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 45.2 bits (102), Expect = 4e-06
Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 26/155 (16%)
Query: 231 CDVCGLLFSSKLKYLQHRHKACRIQKKHQCRICNESYFRYMDLKDHSLEHL-RLCYVCDV 289
C+VC F K LQ+ + +K +C+ C++ + R LK H H Y C+
Sbjct: 137 CEVCNRSFGYK-HVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEH 195
Query: 290 CKEQFDTKGAMAHHLKFLHSGRRPRTLYKILNIGTERLYLCRFCDESSVDKRLIEKHTQL 349
C QF + HL+ +H+G RP Y C C D ++ H +
Sbjct: 196 CDRQFVQVANLRRHLR-VHTGERP--------------YGCEHCSMKFSDSNQLKAHVLI 240
Query: 350 LPDLSNRAMTGYRDFYFCDQCMRKFSTETDMLQHK 384
T + F CD+C +F ++ HK
Sbjct: 241 --------HTNEKPFE-CDKCRGRFRRRHHLVHHK 266
Score = 42.7 bits (96), Expect = 2e-05
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 25/129 (19%)
Query: 260 CRICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLKFLHSGRRPRTLYK 318
C +CN S+ L++H H + C C ++F + H++ LH+G RP
Sbjct: 137 CEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMR-LHTGERP----- 190
Query: 319 ILNIGTERLYLCRFCDESSVDKRLIEKHTQLLPDLSNRAMTGYRDFYFCDQCMRKFSTET 378
Y C CD V + +H R TG R Y C+ C KFS
Sbjct: 191 ---------YRCEHCDRQFVQVANLRRHL--------RVHTGERP-YGCEHCSMKFSDSN 232
Query: 379 DMLQHKWTH 387
+ H H
Sbjct: 233 QLKAHVLIH 241
Score = 39.1 bits (87), Expect = 2e-04
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 210 CNYCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQHRHKACRIQKKHQCRI 262
C C+K+F K H++LH C+ C F +H + ++ + C
Sbjct: 165 CQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHL-RVHTGERPYGCEH 223
Query: 263 CNESYFRYMDLKDHSLEHLR-LCYVCDVCKEQFDTKGAMAHH 303
C+ + LK H L H + CD C+ +F + + HH
Sbjct: 224 CSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRHHLVHH 265
Score = 34.3 bits (75), Expect = 0.007
Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 22/164 (13%)
Query: 105 RENTKQVDDTSSSDTENEMVDPKMAVK-----CNICEKSYPTEKKLLKHQDKKH------ 153
+ T +V++ S S T + + K + + C +C +S+ K +L++ ++ H
Sbjct: 105 KRKTWKVEEDSPSPTSSVSPEVKDSSRDRPFTCEVCNRSFGY-KHVLQNHERTHTGEKPF 163
Query: 154 --MIVYERPKKRVSFSDHVIVHEVKEYHKCRKCPKIFKEYXXXXXXXXXXXXXXXCYICN 211
++R + H+ +H + ++C C + F + Y C
Sbjct: 164 ECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERP-YGCE 222
Query: 212 YCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQHR 248
+C+ KF D K H+ +H CD C F + + H+
Sbjct: 223 HCSMKFSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRHHLVHHK 266
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 44.4 bits (100), Expect = 6e-06
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 25/134 (18%)
Query: 255 QKKHQCRICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLKFLHSGRRP 313
+K ++C CN+S+ + +L H H + C VC +F ++ H++ HSG RP
Sbjct: 19 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR-THSGERP 77
Query: 314 RTLYKILNIGTERLYLCRFCDESSVDKRLIEKHTQLLPDLSNRAMTGYRDFYFCDQCMRK 373
Y CR C ++ D + KH R +G + Y C C+ +
Sbjct: 78 --------------YRCRLCKKAFSDSSTLTKHL--------RIHSGEKP-YECKLCLLR 114
Query: 374 FSTETDMLQHKWTH 387
FS ++ +H H
Sbjct: 115 FSQSGNLNRHMRVH 128
Score = 42.3 bits (95), Expect = 3e-05
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 9/106 (8%)
Query: 208 YICNYCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQHRHKACRIQKKHQC 260
Y C CNK F H++ H C VC FS H + ++ ++C
Sbjct: 22 YRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHM-RTHSGERPYRC 80
Query: 261 RICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLK 305
R+C +++ L H H Y C +C +F G + H++
Sbjct: 81 RLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMR 126
Score = 30.3 bits (65), Expect = 0.11
Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 169 HVIVHEVKEYHKCRKCPKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIK 228
HV H ++ +C C + F + Y C C K F D H++
Sbjct: 40 HVRTHSGEKPFRCPVCDRRFSQ-SSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLR 98
Query: 229 LH-------CDVCGLLFSSKLKYLQH 247
+H C +C L FS +H
Sbjct: 99 IHSGEKPYECKLCLLRFSQSGNLNRH 124
Score = 27.1 bits (57), Expect = 1.0
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 8/107 (7%)
Query: 131 KCNICEKSYPTEKKLLKH-------QDKKHMIVYERPKKRVSFSDHVIVHEVKEYHKCRK 183
+C C KS+ L H + + + R + S + H+ H + ++CR
Sbjct: 23 RCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL 82
Query: 184 CPKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH 230
C K F + Y C C +F H+++H
Sbjct: 83 CKKAFSD-SSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRVH 128
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 36.3 bits (80), Expect = 0.002
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 255 QKKHQCRICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLKFLHSGRRP 313
+K +C+ C++ + R LK H H Y C+ C QF + HL+ +H+G RP
Sbjct: 7 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLR-VHTGERP 65
Score = 25.4 bits (53), Expect = 3.2
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 173 HEVKEYHKCRKCPKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH 230
H ++ +C++C K F Y C +C+++FV + H+++H
Sbjct: 4 HTGEKPFECQECHKRFTR-DHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60
Score = 25.4 bits (53), Expect = 3.2
Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 24/89 (26%)
Query: 285 YVCDVCKEQFDTKGAMAHHLKFLHSGRRPRTLYKILNIGTERLYLCRFCDESSVDKRLIE 344
+ C C ++F + H++ LH+G RP Y C CD V +
Sbjct: 10 FECQECHKRFTRDHHLKTHMR-LHTGERP--------------YRCEHCDRQFVQVANLR 54
Query: 345 KHTQLLPDLSNRAMTGYRDFYFCDQCMRK 373
+H R TG R Y C+ C K
Sbjct: 55 RHL--------RVHTGERP-YGCEHCSMK 74
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.005
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Query: 210 CNYCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQH 247
C YCN F D V + +H+ H C++CG+ S K+ + H
Sbjct: 473 CQYCNIAFGDAVLYTIHMGYHGFHNPFTCNMCGVECSDKVSFFLH 517
Score = 27.5 bits (58), Expect = 0.79
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 181 CRKCPKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLHCDV 233
C KCP I EY + CN C+ V++ H+K H +V
Sbjct: 233 CPKCPFI-TEYKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNV 284
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 34.3 bits (75), Expect = 0.007
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 20/122 (16%)
Query: 287 CDVCKEQFDTKGAMAHHLKFLHSGRRPRTLYKILNIGTERLYLCRFCDESSVDKRLIEKH 346
C +C K A+ H + H+G RP + C+ C + K ++ H
Sbjct: 137 CVICHRVLSCKSALQMHYR-THTGERP--------------FKCKICGRAFTTKGNLKTH 181
Query: 347 TQLLPDLSNRAMTGYRDFYFCDQCMRKFSTETDMLQHKWTHFLKTSDNTQVQLQSVLVNK 406
+ +RA R + C C +KF+ + QH H + +D T Q+Q+ V
Sbjct: 182 MGV-----HRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKD 236
Query: 407 KP 408
P
Sbjct: 237 FP 238
Score = 31.1 bits (67), Expect = 0.064
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 210 CNYCNKKFVDRVFFKVHIKLH-------CDVCGLLFSSKLKYLQHR--HKACR-IQKKHQ 259
C C++ + ++H + H C +CG F++K H H+A ++ HQ
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQ 196
Query: 260 CRICNESYFRYMDLKDHSLEH 280
C +C++ + + L+ H H
Sbjct: 197 CPVCHKKFTNALVLQQHIRLH 217
Score = 29.1 bits (62), Expect = 0.26
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 253 RIQKKHQCRICNESYFRYMDLKDHSLEHL-RLCYVCDVCKEQFDTKGAMAHHLKFLHSGR 311
++ +QC IC+ L+ H H + C +C F TKG + H+ +H +
Sbjct: 130 KLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMG-VHRAK 188
Query: 312 RPRTLYKILNIGTERLYLCRFCDESSVDKRLIEKHTQL 349
P + L+ C C + + ++++H +L
Sbjct: 189 PPMRV----------LHQCPVCHKKFTNALVLQQHIRL 216
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 31.9 bits (69), Expect = 0.037
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query: 208 YICNYCNKKFVDRVFFKVHIKLH-------CDVCGLLF 238
+IC YCN++F +H + H CD+CG F
Sbjct: 80 FICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAF 117
Score = 27.1 bits (57), Expect = 1.0
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 231 CDVCGLLFSSKLKYLQHRHKACRIQKKHQCRICNESYFRYMDLKDH 276
C C F+ L H + ++ + C IC +++ R L+DH
Sbjct: 82 CKYCNRQFTKSYNLLIHE-RTHTDERPYSCDICGKAFRRQDHLRDH 126
Score = 25.4 bits (53), Expect = 3.2
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 347 TQLLPDLSNRAMTGYRDFYFCDQCMRKFSTETDMLQHKWTH 387
T L P L + R F C C R+F+ ++L H+ TH
Sbjct: 63 TPLQPKLVAGKLKPKRQF-ICKYCNRQFTKSYNLLIHERTH 102
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 29.5 bits (63), Expect = 0.20
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 207 CYICNYCNKKFVDRVFFKVHIKLHCD----VCGLLFSSKL----KYLQHRHKACRIQKKH 258
C+I C K + K H++ H VC LF K LQ + +K+
Sbjct: 317 CHIPG-CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRF 375
Query: 259 QCRICNESYFRYMDLKDHSLEH 280
C ICN+ + R L H H
Sbjct: 376 ACPICNKRFMRSDHLAKHVKTH 397
Score = 27.1 bits (57), Expect = 1.0
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 230 HCDVCGLLFSSKLKYLQHRHKACRIQKKHQCR--ICNESYFRYMDLKDHSLEHL-RLCYV 286
H CG ++ K +L+ + ++ C C + + R +L+ H H +
Sbjct: 318 HIPGCGKVYG-KTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFA 376
Query: 287 CDVCKEQFDTKGAMAHHLKFLHSG 310
C +C ++F +A H+K H+G
Sbjct: 377 CPICNKRFMRSDHLAKHVK-THNG 399
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 26.6 bits (56), Expect = 1.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 287 CDVCKEQFDTKGAMAHHLKFLH 308
C C F +KGA HHL +H
Sbjct: 1056 CAFCDTPFISKGAYRHHLSKMH 1077
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 24.2 bits (50), Expect = 7.4
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 477 RKAIERFCAEVRRLCHAEKRRDFVSEAYLLTLGKFVNMFAVLDELKNMK-SSVKNDYSTY 535
R ER C +++R + + EAY L V+ A + N K + +
Sbjct: 242 RYNFERLCNKLKRATRFNDFNEAIKEAYFPKLDSLVSSRAWPSRVANQKLRDLNREVDQI 301
Query: 536 RRAAQFLKVMSD 547
++ + LK SD
Sbjct: 302 KQDVEDLKRWSD 313
>AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q1 protein.
Length = 126
Score = 23.8 bits (49), Expect = 9.7
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 792 FAMIEVIAMIKGLQVLMARMETVFADAARRSIYAELQD--FVQLVLREPLR 840
FA++ + + + ++A M V D +++ Y +LQ+ +++ ++E LR
Sbjct: 7 FALMLIARHSEVQESIVAEMREVLGDLSKKPSYNDLQNLKYLERCIKETLR 57
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.323 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,024
Number of Sequences: 317
Number of extensions: 14982
Number of successful extensions: 99
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 46
length of query: 1615
length of database: 114,650
effective HSP length: 66
effective length of query: 1549
effective length of database: 93,728
effective search space: 145184672
effective search space used: 145184672
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 49 (23.8 bits)
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