GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001670-TA|BGIBMGA001670-PA|IPR007087|Zinc finger,
C2H2-type, IPR008081|Cytoplasmic fragile X mental retardation protein
interacting protein, IPR010996|DNA polymerase beta, N-terminal-like
         (1615 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    62   1e-10
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    35   0.020
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   1.7  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       27   5.3  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        26   7.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   7.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    26   7.0  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   7.0  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    26   9.3  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 62.1 bits (144), Expect = 1e-10
 Identities = 66/283 (23%), Positives = 107/283 (37%), Gaps = 41/283 (14%)

Query: 132 CNICE----KSYPTEKKLLKH-QDKKHM-IVYERPKKRV-SFSDHVIVHEVKEYHKCRKC 184
           CN C     K +   + L  H +D+ H  +V ER  K + S  +HV  H   + H+C+ C
Sbjct: 129 CNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHC 188

Query: 185 PKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH-------CDVCGLL 237
              F                   + C  C+   V+    K HI+ H       C  C   
Sbjct: 189 DNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYA 248

Query: 238 FSSKLKYLQHRHKACRIQKKHQCRICNESYFRYMDLKDHSLEHL---RLCYVCDVCKEQF 294
              K K  +H  +    +K + C +C   + +   LK H + H    +  + C +C    
Sbjct: 249 SPDKFKLTRHM-RIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTC 307

Query: 295 DTKGAMAHHLKFLHSGRRP------------RTLYKI--LNIGTERLYLCRFCDESSVDK 340
             K  +  H++ LH+  +P            R  YK+       E+ Y C +C  +S+  
Sbjct: 308 GRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISM 367

Query: 341 RLIEKHTQLLPDLSNRAMTGYRDFYFCDQCMRKFSTETDMLQH 383
           R +E H  L  D         +  Y CDQC + F  +  + +H
Sbjct: 368 RHLESHLLLHTD---------QKPYKCDQCAQTFRQKQLLKRH 401



 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 45/188 (23%), Positives = 70/188 (37%), Gaps = 9/188 (4%)

Query: 231 CDVCGLLFSSKLKYLQHRHKACRIQKKHQCRICNESYFRYMDLKDHSLEHLRLC-YVCDV 289
           C+ C    S+KL  L    K     + H+C +C   +     L++H   H     + C  
Sbjct: 129 CNYCNYT-SNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKH 187

Query: 290 CKEQFDTKGAMAHHLKFLHSGRRPRTLYKILNIGTERLYLCRFCDESSVDKRLIEKH-TQ 348
           C   F T G +  H+++ H+  RP    +      E   L R     + +K     H T 
Sbjct: 188 CDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTY 247

Query: 349 LLPDLSN-----RAMTGYRDFYFCDQCMRKFSTETDMLQHKWTHFLKTSDNTQVQLQSVL 403
             PD        R  TG +  Y CD C  +F+    +  HK  H +      Q +L    
Sbjct: 248 ASPDKFKLTRHMRIHTGEKP-YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTT 306

Query: 404 VNKKPKLK 411
             +K  L+
Sbjct: 307 CGRKTDLR 314



 Score = 53.2 bits (122), Expect = 5e-08
 Identities = 58/305 (19%), Positives = 111/305 (36%), Gaps = 40/305 (13%)

Query: 131 KCNICEKSYPTEKKLLKHQDKKHMIVYERPKK-------RVSFSD---HVIVHEVKEYHK 180
           +C  C+  + T  +L++H   +H   +ERP K        V  S    H+  H  ++  +
Sbjct: 184 RCKHCDNCFTTSGELIRHIRYRH--THERPHKCTECDYASVELSKLKRHIRTHTGEKPFQ 241

Query: 181 CRKCPKIFKEYXXXXXXXXXXXXXXXCYICNYCNKKFVDRVFFKVHIKLH---------C 231
           C  C     +                 Y C+ C  +F      K H  +H         C
Sbjct: 242 CPHCTYASPDKFKLTRHMRIHTGEKP-YSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQC 300

Query: 232 DVCGLLFSSKLKYLQHRHKACRIQKKHQCRICNESYFRYMDLKDHSLEHL-RLCYVCDVC 290
            +C      K     H        K  +C+ C+ ++      K H+  H    CY C+ C
Sbjct: 301 KLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360

Query: 291 KEQFDTKGAMAHHLKFLHSGRRPRTLYKILNIGTERLYLCRFCDESSVDKRLIEKHTQLL 350
                +   +  HL  LH+ ++P              Y C  C ++   K+L+++H    
Sbjct: 361 PYASISMRHLESHL-LLHTDQKP--------------YKCDQCAQTFRQKQLLKRHMNYY 405

Query: 351 PDLSNRAMTGYRDFYFCDQCMRKFSTETDMLQHKWTHFLKTSDNTQVQLQSVLVNKKPKL 410
            +    A T     + C  C R F  + ++++H   H          +++++   ++ K+
Sbjct: 406 HNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMH--DPESTVSKEMEALREGRQKKV 463

Query: 411 KTTYK 415
           + T++
Sbjct: 464 QITFE 468


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 34.7 bits (76), Expect = 0.020
 Identities = 13/52 (25%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 228 KLHCDVCGLLFSSKLKYLQHRHKACRIQKKH---QCRICNESYFRYMDLKDH 276
           +  C++C + + +KL+Y +H ++  RI  ++   +C IC++ + +  D + H
Sbjct: 348 RFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLH 399



 Score = 29.1 bits (62), Expect = 0.99
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 131 KCNICEKSYPTEKKLLKHQDKKHMIVYE 158
           +CN+C+ SY T+ +  KH+ + H I  E
Sbjct: 350 QCNLCDMSYRTKLQYQKHEYEVHRISNE 377



 Score = 27.5 bits (58), Expect = 3.0
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 256 KKHQCRICNESYFRYMDLKDHSLEHLRLC-----YVCDVCKEQFDTKGAMAHHLKFLH 308
           ++ QC +C+ SY   +  + H  E  R+        C +C + F  +     H++ +H
Sbjct: 347 QRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 258 HQCRICNESYFRYMDLKDHSLEHLRLCYVCDVCKEQFDTKGAMAHHLKFLHSGRRPRT 315
           H+C++C +       +++H   H    + C +C+  +     +  H KF H    P T
Sbjct: 500 HRCKLCGKVVTH---IRNHYHVHFPGRFECPLCRATYTRSDNLRTHCKFKHPMFNPDT 554


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 627 NINRLDQKKKIRLDRIDRIFKNLEVVPLFGDMQIAPFNYIKRS 669
           ++NRLDQ   + L    +I K ++   L   ++  P N++ R+
Sbjct: 177 SVNRLDQAMAVFLGTDTKISKPIQDKALQNGVEFVPVNFLNRN 219


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 1051 QFLYDEVEAEVNLCFDQFVYKLSEQVYAYYKQLAASMLLDKRYRAECLSRGAG 1103
            Q L+   E EVN+   +F +  SEQ+    +Q+    +  +      L+RG G
Sbjct: 283  QALWYMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREIFSQNASLPLLARGRG 335


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 1375 LIEQALSQEEVTDLLHAAPFQNILPRPYSTDGDKPESKQKRLEAKYASLQIVHNVDKYGT 1434
            ++ QA  +     LL  +   +I  + Y+ DG     ++ R+E  Y+ L+  H++     
Sbjct: 939  ILMQAKMESIEIPLLQGS-MDDIGQQEYAADGGSAYERESRIEIDYSKLE--HHLK--NL 993

Query: 1435 AKQGQLSREGDLLTRE 1450
            +   Q+ + GD L +E
Sbjct: 994  SDPDQIKKSGDSLAKE 1009


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 22/120 (18%), Positives = 57/120 (47%), Gaps = 9/120 (7%)

Query: 541  FLKVMSDSQSLQESQNLSMFLATQNK-----IRDTVKDALEKINGYEDLLADVVNICVHM 595
            F  + +DS    +  ++ ++L  +++     +R    +    I  + ++L++V    V++
Sbjct: 1593 FSVLANDSYGCHDRAHVFIYLIREDQRVKFILRQRPSEIRHNIQSFREILSNVSGCIVNI 1652

Query: 596  FETRMYLTPCEKHMLVKVMGFGLFLMDSE---VCNINRLDQKKKIRLDRIDRIFKNLEVV 652
             + R++  P       K   F + L+D +   V  ++++ Q     ++++DR+FK   V+
Sbjct: 1653 DDIRVHENPDGSVDRTKSDMF-MHLVDQKNNSVLEVHQVLQLLDTHVEKLDRLFKEFNVL 1711


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 519 DELKNMKSSVKNDYSTYRRAAQFLKVMSDSQSLQESQNLSMFLATQNKIRDTVKDALEKI 578
           +EL N+           RR ++  K +++++   E  N+S F   + + R TV + L   
Sbjct: 330 NELTNINRIKGKMLLLQRRFSEDFKRINETRVCGE--NISTFQLEERRRRRTVIEKLNIE 387

Query: 579 NGYEDLLADVVNICVHMFETRMYLT 603
           +G      D +N+ +  F + +Y T
Sbjct: 388 DGTSLTDKDAINVHIRSFFSELYTT 412


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 409 KLKTTYKVNDVIPERFNPKVVLEKLAIDPFPNYMSFNCKKFDIVTGEIKKAI 460
           KLK +YK      E   P+ V  K  ++ F NY + N +  D+  G I + I
Sbjct: 27  KLKKSYKKASKAEENEAPRKVSHKAQLERFKNYAN-NLEIEDLRDGMIAQMI 77


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,591,697
Number of Sequences: 2123
Number of extensions: 63657
Number of successful extensions: 161
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 130
Number of HSP's gapped (non-prelim): 23
length of query: 1615
length of database: 516,269
effective HSP length: 73
effective length of query: 1542
effective length of database: 361,290
effective search space: 557109180
effective search space used: 557109180
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)