Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001666-TA|BGIBMGA001666-PA|IPR001487|Bromodomain,
IPR009057|Homeodomain-like
(820 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 69 1e-11
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 65 2e-10
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 64 6e-10
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624... 63 1e-09
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 55 2e-07
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 55 3e-07
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 54 6e-07
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 53 8e-07
04_04_1198 - 31679584-31679642,31679740-31679854,31680701-316807... 53 1e-06
07_03_0538 + 19231318-19231382,19231652-19232390,19232468-192325... 52 1e-06
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 52 1e-06
01_06_0069 - 26169818-26169904,26170186-26170893 45 2e-04
10_08_0006 - 14035990-14036135,14036246-14036339,14036845-140371... 44 4e-04
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 44 7e-04
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 42 0.002
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 40 0.011
03_02_0895 + 12230683-12230844,12230937-12230991,12231106-122311... 38 0.043
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 34 0.53
09_04_0602 - 18892498-18892612,18892756-18892819,18892878-188928... 33 1.2
09_02_0244 + 6196651-6196799,6197049-6197106,6197212-6197304 31 2.8
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 31 2.8
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 31 2.8
07_03_0922 - 22612773-22613321,22613616-22614189,22614389-226144... 31 3.7
03_06_0617 - 35124114-35124148,35124243-35124335,35124415-351249... 30 6.5
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 30 6.5
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 30 6.5
11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214... 30 8.6
09_03_0051 + 11902322-11903125 30 8.6
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 30 8.6
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 69.3 bits (162), Expect = 1e-11
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 674 SGNDAERQ--HRLWRKSVMLVYSRLCAHKYASLFLRPISDEEAPG---YSVVVKRPMDLT 728
+G DAE++ ++KS+ L+ SRL HK+ +F +P+ D A G Y ++K PMDL
Sbjct: 303 AGYDAEQRLYSHAFKKSMSLL-SRLMKHKFGWVFNKPV-DAVALGLHDYFAIIKHPMDLG 360
Query: 729 TIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKEMHEEAQCQLGMLVAAQ 788
TI+ + +G R EF DV L NA+ YN VH MA+++ + Q + A
Sbjct: 361 TIKTRLTHGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEV 420
Query: 789 AHAGLCAAPPLRRK 802
+ C PPL K
Sbjct: 421 QYLASC--PPLPNK 432
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 65.3 bits (152), Expect = 2e-10
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 692 VYSRLCAHKYASLFLRPISDEEA--PGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDV 749
+ +L K +++F P+ + P Y ++K+PMDL TIR +D+G+ + +EF DV
Sbjct: 168 ILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADV 227
Query: 750 LLMLSNALIYNSTEHSVHSMAKEMHEEAQCQLGML------VAAQAHAGLCAAPPLRRK 802
L SNA+ YN H VH A ++++ + + + +A +AH + A RRK
Sbjct: 228 RLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLASIATEAHVEVDRADSKRRK 286
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 63.7 bits (148), Expect = 6e-10
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEF 745
+K ++ + RL +F P+ EE P Y +++ PMD +TIR + N + T +F
Sbjct: 201 KKLLLFILDRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQF 260
Query: 746 QRDVLLMLSNALIYNSTEHSVHSMAKEMHEEAQ 778
+ DV L+ SNA+ YNS + + A+ + A+
Sbjct: 261 ENDVFLLTSNAMSYNSDDTVYYRQARSIEALAK 293
>01_01_0802 +
6246267-6247541,6247625-6247682,6247806-6248129,
6248321-6248355
Length = 563
Score = 62.9 bits (146), Expect = 1e-09
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 661 SESAAETSAPDSPSGNDAERQHRLWR---KSVMLVYSRLCAHKYASLFLRPISDEEAPG- 716
S+ ++ P S G AE + +L+ KS + +RL HK++ +F P+ D A G
Sbjct: 115 SKHKSKKGNPSSNPGLSAEARRKLYAPVFKSCGALLARLMKHKHSWVFNTPV-DASALGL 173
Query: 717 --YSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKEM 773
Y ++ +PMDL T++ + G+ ++ EF DV L NA+ YN VH MA+++
Sbjct: 174 HDYHTIITKPMDLGTVKSRLAAGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQL 232
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 692 VYSRLCAHKYASLFLRPIS--DEEAPGYSVVVKRPMDLTTIRRNI---DNGNIRTTAEFQ 746
+ ++ +H++A FL+P+ + Y ++ +PMD +TI++ + D+ E
Sbjct: 83 IVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIY 142
Query: 747 RDVLLMLSNALIYNSTEHSVHSMAKEMHEE 776
DV L+ +NA+ YN H VH MAK + E+
Sbjct: 143 SDVRLIFANAMKYNDERHDVHIMAKSLLEK 172
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 54.8 bits (126), Expect = 3e-07
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEAP--GYSVVVKRPMDLTTIRRNIDNGNIRTTA 743
RK + +RL K + F P+ E Y +++ PMDL T++ N+ G +
Sbjct: 138 RKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHE 197
Query: 744 EFQRDVLLMLSNALIYNSTEHSVHSMAKEM 773
F DV L SNAL YN +H VH A +
Sbjct: 198 AFATDVRLTFSNALRYNPADHHVHRYASNL 227
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 53.6 bits (123), Expect = 6e-07
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 696 LCAHKYASLFLRPISDEEA--PGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLML 753
L H++A FL P+ + P Y ++K+PMDL TI + ++ G T +F DV L
Sbjct: 173 LFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYSTPWDFAADVRLTF 232
Query: 754 SNALIYNSTEHSVHSMAKEM 773
NA+ YN + V+ M K +
Sbjct: 233 DNAVTYNPVGNDVNLMGKTL 252
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 53.2 bits (122), Expect = 8e-07
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEAP--GYSVVVKRPMDLTTIRRNIDNGNIRTTA 743
RK + ++L K + F P+ + Y V+K PMDL T+R N+ G +
Sbjct: 121 RKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHD 180
Query: 744 EFQRDVLLMLSNALIYNSTEHSVHSMAKEM 773
+F DV L SNAL YN H VH+ A ++
Sbjct: 181 DFAADVRLTFSNALRYNPAGHEVHTFAGDL 210
>04_04_1198 -
31679584-31679642,31679740-31679854,31680701-31680790,
31682207-31683010
Length = 355
Score = 52.8 bits (121), Expect = 1e-06
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEA--PGYSVVVKRPMDLTTIRRNIDNGNIRTTA 743
RK + ++L K + F P+ + Y V+K PMDL T+R N+ G +
Sbjct: 2 RKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHD 61
Query: 744 EFQRDVLLMLSNALIYNSTEHSVHSMAKEM 773
+F D+ L SNAL YN H VH+ A ++
Sbjct: 62 DFAADIRLTFSNALRYNPAGHEVHTFAGDL 91
>07_03_0538 +
19231318-19231382,19231652-19232390,19232468-19232516,
19232600-19232664,19232774-19232828,19234107-19234225,
19234346-19234412,19235316-19235437,19235521-19235790
Length = 516
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 692 VYSRLCAHKYASLFLRPISDEE--APGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDV 749
+ +L HK +F P+ P Y V++ PMDL T++R + + EF DV
Sbjct: 120 ILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADV 179
Query: 750 LLMLSNALIYNSTEHSVHSMAKEMHE 775
L SNA+ YN + VH +A ++++
Sbjct: 180 RLTFSNAMKYNPPGNDVHGIADQLNK 205
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 704 LFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTE 763
LF +P++ +EAP Y +++RPMDL TIR + + +F+ DV + NA YN
Sbjct: 1730 LFRKPVTKKEAPDYFDIIERPMDLGTIRDKVRKMEYKNREDFRHDVAQIALNAHTYNLNR 1789
Query: 764 H-SVHSMAKEMHE 775
H + +A E+ E
Sbjct: 1790 HPHIPPLADELLE 1802
>01_06_0069 - 26169818-26169904,26170186-26170893
Length = 264
Score = 45.2 bits (102), Expect = 2e-04
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 9/142 (6%)
Query: 665 AETSAPDSPSGNDAERQHRLWRKSVMLVYSRLCAHKYASLFLRPISDE--EAPGYSVVVK 722
A +A +G A+ L R +L +L H+ +F P+ Y + +
Sbjct: 34 AVAAASPGVAGVPADLGDALLRCGKLL--DKLLEHEDGWVFAEPVDARALRLVDYYLRIS 91
Query: 723 RPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKEMHEEAQCQLG 782
PMDL T+RR ++ F DV L +NA+ YNS V+ A E+ E +
Sbjct: 92 DPMDLGTVRRRLERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGWP 151
Query: 783 MLVAAQAHAGLCAAPPLRRKRR 804
++AA P RKRR
Sbjct: 152 SVLAAPPR-----PPDAERKRR 168
>10_08_0006 -
14035990-14036135,14036246-14036339,14036845-14037176,
14038040-14038094,14038682-14038750,14038940-14039039,
14039212-14039255,14039705-14039873,14040262-14040333,
14040439-14040519,14040586-14040650,14040796-14041260
Length = 563
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 692 VYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAE-FQRDVL 750
++ + H A F P+ + P Y ++K P+DL T+ + +++ T E F D+
Sbjct: 482 IFLNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMK 541
Query: 751 LMLSNALIYNSTE 763
M SNA YNS +
Sbjct: 542 RMFSNAKTYNSPD 554
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 43.6 bits (98), Expect = 7e-04
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEF 745
+K ++ V RL +F P+ EE P Y ++K PMD +TIR+ ++ G +F
Sbjct: 107 KKLLVFVLDRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQF 166
Query: 746 QRDV 749
+ V
Sbjct: 167 EVSV 170
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 41.9 bits (94), Expect = 0.002
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEF 745
RK++ ++ +L +F P+ EE P Y V++ PMD T+RR + R+ +F
Sbjct: 10 RKALDMILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFGTVRRKLARNAYRSFEQF 69
Query: 746 Q 746
+
Sbjct: 70 E 70
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 39.5 bits (88), Expect = 0.011
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 700 KYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTA--------EFQRDVLL 751
K ++F R + ++ YS ++R +DL T+R + A EF RD++L
Sbjct: 313 KAGAVFERRLDSQDGERYSGTIRRHVDLETVRSRLVGATAAAAAAACYASASEFYRDMML 372
Query: 752 MLSNALIYNSTEHSVHSMAKEMHEEAQCQLGMLVAAQAHAGLCAAPPLRRKRRRHHSPLH 811
+ +NAL++ H+ A ++ Q+ Q HAG AP + P
Sbjct: 373 LCANALVFFPRGSPEHAAALQLRALVSKQVSK--DRQPHAG-AKAPAAAAEEEEKKKPAK 429
Query: 812 HPAHYTRP 819
A P
Sbjct: 430 ADADIAGP 437
>03_02_0895 +
12230683-12230844,12230937-12230991,12231106-12231169,
12231292-12231334,12231509-12231607,12231710-12231778,
12231912-12232245,12232317-12232471,12232592-12233287
Length = 558
Score = 37.5 bits (83), Expect = 0.043
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 704 LFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTE 763
LF P D + Y+ V RP D T+R+ +G T +F+ DV ++ A+ NS +
Sbjct: 100 LFAMP-DDIQVTDYAERVNRPGDFATLRQKNKDGMYNTLEQFENDVYMVFQKAMSINSED 158
Query: 764 HSVHSMAKEMHEEAQ 778
+ A + +A+
Sbjct: 159 TIPYREAMSLLHQAK 173
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 734 IDNGNIRTTAEFQRDVLLMLSNALIYNSTEHS---VHSMAKEMHEEAQCQLGML 784
+D+G T A F +D+ L++SNA YN ++++ + S A E+ + Q L +
Sbjct: 944 VDSGQYLTRASFMKDIDLIVSNAKTYNGSDYNGSRIVSRACELRDVVQGMLSQM 997
>09_04_0602 -
18892498-18892612,18892756-18892819,18892878-18892884,
18893980-18894153
Length = 119
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 785 VAAQAHAGLCAAPPLRRKRRRHHSPLHHPAHYTRPH 820
VAA A A LCAAP R H+ L HP H R H
Sbjct: 13 VAAAAAALLCAAPRPRVSTPPAHARLIHPPHSARTH 48
>09_02_0244 + 6196651-6196799,6197049-6197106,6197212-6197304
Length = 99
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 12 RVPLDTWNIREQLCLASAVVRSGDQNWMSVSRALKTLGEPNRPPDCCAAQYGTLLEHVET 71
R P + W+IRE++ A+ R G Q+W V++ + T + C A+ L H +
Sbjct: 30 RPPQEGWSIRERVNFRIAIGRFG-QDWPRVAQFIST---KSTGQICVYAEEYFLKRHTHS 85
Query: 72 PKRKKR 77
P + KR
Sbjct: 86 PVKNKR 91
>08_01_0068 +
471729-472460,472578-472655,473270-473507,474130-474205,
474820-474961,475326-475619,476037-476249
Length = 590
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 715 PGYSVVVKRPMDLTTIRRNIDNGN-IRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKEM 773
P Y ++ PMD TI +N++ G+ + + +DV + N YNS + + K +
Sbjct: 270 PDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRV 329
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 715 PGYSVVVKRPMDLTTIRRNIDNGN-IRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKEM 773
P Y ++ PMD TI +N++ G+ + + +DV + N YNS + + K +
Sbjct: 271 PDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRV 330
>07_03_0922 -
22612773-22613321,22613616-22614189,22614389-22614466,
22615455-22615504,22616215-22616448
Length = 494
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 18 WNIREQLCLASAVVRSGDQNWMSVSRALKTLGEPNRPPDCCAAQYGTL 65
W E+L L SAV+R G W +V+ +++ P+ C A++ +
Sbjct: 40 WGTWEELVLGSAVIRHGGVAWGAVAAEVRSRSPCAFSPEECEAKFSEI 87
>03_06_0617 -
35124114-35124148,35124243-35124335,35124415-35124919,
35125039-35125238,35125514-35125604,35125699-35126769
Length = 664
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 74 RKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDER 132
+KK + D VE P++ + R+ + R+ E++ + + + MK ++ +R + ER
Sbjct: 596 QKKTSKDSSVEQPEKKLTHRIRRKRMEEVKTLLETPDHEIDRMKLSVTHLRLLQEAKER 654
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 92 KRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERLLELWANM 140
+R QD++ + +++ M + HE + +L E+R S D E N+
Sbjct: 191 ERALQDQLRQATESVKNMQKLHESAQSQLFELRTQSEEDRAAKETEVNL 239
>02_05_0999 +
33405982-33408279,33408356-33408466,33408551-33408703,
33408870-33409033,33409113-33409210,33409296-33409474,
33409588-33409675,33410285-33410451
Length = 1085
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 797 PPLRRKRRRHHSPLHHPAHYTRPH 820
PPL+ RRR +SP+H + Y PH
Sbjct: 496 PPLQSLRRRANSPVHTGSPYESPH 519
>11_06_0553 -
24920428-24921057,24921149-24921276,24921372-24921409,
24921522-24921734,24921906-24921998,24922089-24922276,
24922396-24922502,24922614-24922775,24922870-24922953,
24923060-24923168,24923340-24923468,24923504-24923556,
24923654-24923759,24924082-24924189
Length = 715
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 74 RKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRNPSTSDERL 133
++ R+ + E ++ +K+L Q RIAE+ K I + Q+ +KD +I+ TS E
Sbjct: 493 KRARSIESSKELSED--IKKLKQKRIAELDKEICDAEQE---LKDLNEQIKRAETSLEER 547
Query: 134 LEL 136
+L
Sbjct: 548 KKL 550
>09_03_0051 + 11902322-11903125
Length = 267
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 507 SASETEVVTPEALPQDESVEEPPPAQQPEDVEEE 540
+ASE + TP P + + PPAQ+PE EEE
Sbjct: 105 AASEPQTPTPPPRP-SVAAPDTPPAQRPETEEEE 137
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 16 DTWNIREQLCLASAVVRSGDQNWMSVSRALKTLGEPNRPPDCCAAQYGTLLEH 68
+ W RE+ L V + G NW++++ L T +R P C +Y L H
Sbjct: 390 NAWTAREEKRLILTVQQQGMNNWINIAVTLGT----HRTPFQCLVRYQRSLNH 438
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.126 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,659,296
Number of Sequences: 37544
Number of extensions: 548102
Number of successful extensions: 1634
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1602
Number of HSP's gapped (non-prelim): 37
length of query: 820
length of database: 14,793,348
effective HSP length: 88
effective length of query: 732
effective length of database: 11,489,476
effective search space: 8410296432
effective search space used: 8410296432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 64 (29.9 bits)
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