Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001666-TA|BGIBMGA001666-PA|IPR001487|Bromodomain,
IPR009057|Homeodomain-like
(820 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 7e-09
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 60 9e-09
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-08
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 58 3e-08
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 5e-08
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 52 1e-06
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-05
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 49 2e-05
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 7e-05
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-04
SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41) 42 0.003
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.005
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.011
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 36 0.099
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 35 0.23
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 33 0.70
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.70
SB_32223| Best HMM Match : SH3BP5 (HMM E-Value=0.12) 33 1.2
SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35) 33 1.2
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 32 1.6
SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1) 32 2.1
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.1
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 31 2.8
SB_30757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 30 6.5
SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18) 30 6.5
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.6
SB_47486| Best HMM Match : Mic1 (HMM E-Value=7.8) 30 8.6
SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34) 30 8.6
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 60.1 bits (139), Expect = 7e-09
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 705 FLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEH 764
F P++D APGYS V+ PMD +TI+ ID+ + T F+ D LM +NA++YN+ +
Sbjct: 1274 FAYPVNDAIAPGYSRVITHPMDFSTIKTKIDSNSYTTIEAFRDDFYLMCNNAMVYNAPDT 1333
Query: 765 SVHSMAKEM 773
AK +
Sbjct: 1334 IYFKAAKRI 1342
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 59.7 bits (138), Expect = 9e-09
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
Query: 673 PSGNDAERQHRLWRKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRR 732
P + +R L+ + V L H A FL P+ + AP Y +++ PMDL+TI
Sbjct: 345 PPSCEEDRDEDLYT-GMYKVLDYLKKHNNAWPFLEPVDESYAPQYHEIIENPMDLSTIEE 403
Query: 733 NIDNGNIRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKEMHEEAQCQLGM-LVAAQAHA 791
+D T EFQ D+ LM N L YN + M + Q+ Q ++
Sbjct: 404 KLDTSKYATLDEFQSDMKLMFENCLEYNGPDSMYTKMGNTLEAAFNRQIKKHFPEDQENS 463
Query: 792 GLCAAPPLRRKRRRHHSPLHHPAHYT 817
LR+ RR+ L Y+
Sbjct: 464 DEDFEEELRKTRRKEMQKLQKKKGYS 489
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 663 SAAETSAPDSPSGNDAERQHRLWRKSVMLVYSRLCAHK----------YASLFLRPISDE 712
S + AP P RQ W + + + ++C ++ AS FLRP+
Sbjct: 517 SGRKRKAP-MPLNVSPPRQSSGWVRGALSLLQKVCGYRGIGRRKGDVSAASWFLRPVDPN 575
Query: 713 EAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEHSVHSMAKE 772
+APGY V++ PMD T++ +++G + F D++L+ +N YN H V + E
Sbjct: 576 DAPGYYKVIRTPMDFGTVKHKLESGVYDDYSAFHDDMMLVKNNCFCYNPQGHDVRNDCDE 635
Query: 773 M 773
+
Sbjct: 636 V 636
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 58.0 bits (134), Expect = 3e-08
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 705 FLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEH 764
F +P++ ++ P Y V+K PMD+ T+R+++ +G R+ EF +V L+ +N+++YN H
Sbjct: 819 FHKPVNSKQVPDYYEVIKNPMDIETLRQHVQDGMCRSREEFLENVKLLHTNSVLYNGENH 878
Query: 765 SVHSMAKEMHEEAQCQ 780
A ++ A C+
Sbjct: 879 EFTKTANSIY--AACE 892
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 57.2 bits (132), Expect = 5e-08
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 701 YASLFLRPISDEEAPG---YSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNAL 757
YA F +P+ D EA G Y ++K+PMD+T I+ ++N + +EF D+ LM SN
Sbjct: 337 YAWPFYKPV-DAEALGLHDYHDIIKQPMDMTEIKNKLENRAYDSPSEFAADIRLMFSNCY 395
Query: 758 IYNSTEHSVHSMAKEMHE 775
YN +H V MA+++ +
Sbjct: 396 RYNPPDHDVVKMARQLQD 413
Score = 47.6 bits (108), Expect = 4e-05
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 692 VYSRLCAHKYASLFLRPISDEEA--PGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDV 749
V L H +A F P+ + P Y ++K+PMDL TI++ ++N E D
Sbjct: 123 VLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENNEYPCAQECIEDF 182
Query: 750 LLMLSNALIYNSTEHSVHSMAKEMHEEAQCQLGML 784
LM++N YN + M + M + ++ M+
Sbjct: 183 RLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMM 217
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 686 RKSVMLVYSRLCAHKYASLFLRPISDEEAPG---YSVVVKRPMDLTTIRRNIDNGNIRTT 742
R ++M +L + SL R D + G Y +V+ PMDL+TI+R +DNG +
Sbjct: 885 RLALMPTLEKLYKQEPESLPFRSPVDPKLLGCLDYFEIVRNPMDLSTIKRKLDNGQYKNP 944
Query: 743 AEFQRDVLLMLSNALIYNSTEHSVHSMAKEMHEEAQCQL 781
E+ DV LM NA +YN V+ ++ E + ++
Sbjct: 945 WEYCDDVWLMFDNAWLYNRKTSRVYKYCTKLSEVFESEI 983
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/75 (28%), Positives = 41/75 (54%)
Query: 704 LFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTE 763
+F P+ E Y V+K+PMD +T+R ID+ T +F+ D L++ N + YN+ +
Sbjct: 624 IFSDPVDTNEVLDYLDVIKQPMDFSTMRSRIDSNFYHTIEQFEADFNLIIENCMAYNAQD 683
Query: 764 HSVHSMAKEMHEEAQ 778
+ A ++ ++ +
Sbjct: 684 TIYYRAALKLRDQGR 698
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 692 VYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLL 751
V+ +L + F +P+ EE Y V++ PMDL+T+ ID T A + D+ L
Sbjct: 1439 VHHKLIMDRRFKEFSKPVDLEEVEDYLDVIQEPMDLSTMMEKIDRHQYSTCANYLLDIDL 1498
Query: 752 MLSNALIYN 760
+ SNAL YN
Sbjct: 1499 ITSNALKYN 1507
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 46.8 bits (106), Expect = 7e-05
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 677 DAERQHRLWRKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDN 736
+ E + W S ++ + L + + A FL P++ + P Y+ V++PMD +T+ R
Sbjct: 85 EEEPREESWVTSARILLNFLMSREDAEPFLAPVNLADFPDYTDYVEQPMDFSTVWRKFVE 144
Query: 737 GNIRTTAEFQRDVLLMLSNALIYNSTEHS-VHSM 769
+ D+ L+ SN+ YN+ S ++SM
Sbjct: 145 NQYSDPEQLVSDIRLVFSNSRAYNTQPRSRIYSM 178
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 683 RLWRKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTT 742
R R M C A FL+P E+ Y V +P+DL+ + +N+ + +T
Sbjct: 507 RCVRDGAMSASKWRCPSCQAKDFLQPFCLEKYDDYLQFVIKPVDLSLLEKNVRKKHYKTA 566
Query: 743 AEFQRDVLLMLSNALIYNSTEHSVHSMAKEMHEEAQCQLGMLV 785
+F+ +L NA+IY + + +A+ + E+ +L +V
Sbjct: 567 KQFREHAQWILHNAIIYFGEDRELTELAEAIMEDCDGELEEMV 609
>SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41)
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/72 (30%), Positives = 33/72 (45%)
Query: 699 HKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALI 758
H A F +P+ EAP Y +K PMDL T+ + +G + F D+ + N
Sbjct: 218 HASAWPFQKPVERAEAPDYYEHIKYPMDLKTMTERLKSGYYSSKKLFVADMRRIFQNCRT 277
Query: 759 YNSTEHSVHSMA 770
YNS + + A
Sbjct: 278 YNSPDTEYYKCA 289
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/89 (26%), Positives = 40/89 (44%)
Query: 672 SPSGNDAERQHRLWRKSVMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIR 731
SP+ D ++ + K V+ A FL + ++ P Y ++K+P+D+ IR
Sbjct: 843 SPNPPDLTKKMKRLLKYVVKHVDEDTGRSLAEPFLILPTKKDLPDYYQIIKQPVDIRKIR 902
Query: 732 RNIDNGNIRTTAEFQRDVLLMLSNALIYN 760
I++ R + D LM NA YN
Sbjct: 903 ERINSHKYRCLEDLDEDFTLMCRNAQTYN 931
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 39.5 bits (88), Expect = 0.011
Identities = 29/115 (25%), Positives = 47/115 (40%)
Query: 705 FLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYNSTEH 764
FLR S P Y V+K+P+ L IR I +G + + ++ L +NA YN
Sbjct: 359 FLRLPSRRAYPDYYEVIKKPIALMKIRSQIKSGLYDSLEALETELELCFNNAKTYNEPNS 418
Query: 765 SVHSMAKEMHEEAQCQLGMLVAAQAHAGLCAAPPLRRKRRRHHSPLHHPAHYTRP 819
++ A+ M + + +V A G+ L+ K + S A P
Sbjct: 419 MLYKDAERMLDHMSKKKTEIVQMMADKGINLDEFLKTKGKARKSEASDGASVASP 473
Score = 34.7 bits (76), Expect = 0.30
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 714 APGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIY---NSTEHSVHSMA 770
+P Y V+ P+DL I++ + F D+ L+L NAL Y +S E+ +
Sbjct: 54 SPEYYDVISTPIDLLKIQQRLKTDEYEDVGTFTADMELLLDNALKYYKPDSQEYQDATQL 113
Query: 771 KEMHEEAQCQLG 782
K++ +E + + G
Sbjct: 114 KQVFDELKEEQG 125
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 36.3 bits (80), Expect = 0.099
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 700 KYASLFLRPISDEEAPGYSVVV 721
+YA++FL P++D+EAPGY VV
Sbjct: 532 RYANVFLHPVTDDEAPGYHTVV 553
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 696 LCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDNGNIR---TTAEFQRDVLLM 752
L H + F + +S + P Y V+ PMDL+TIR I + + + EF D L+
Sbjct: 506 LFCHSDSIPFQQKVS-KSVPNYYKVITHPMDLSTIRAKIQPQHFQHYSSITEFLSDCQLI 564
Query: 753 LSNALIYNSTEHSVHSMAKEM 773
SN +N ++ K++
Sbjct: 565 FSNCATFNDDLPECFAIRKDI 585
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 33.5 bits (73), Expect = 0.70
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 61 QYGTLLEHVETPKRKKRNSDGGVETPQE--SILKRLTQDRIAEIQKNIAEMSQQHEVMKD 118
Q TLLE + + + N+ V +E SI+KR + E KN+ + + E+ +
Sbjct: 387 QIQTLLEERDFERTEVANATSQVAKAEEEVSIIKRQHEQAAMEYSKNMQALKELIELAEK 446
Query: 119 ELSEIRNPSTSDERLLELWANMES 142
E +E+ + RLL +A ++
Sbjct: 447 EKAELHCQVEEERRLLSFYARRKT 470
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 33.5 bits (73), Expect = 0.70
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 88 ESILKRLTQDRIAEIQKNIAEMSQQHEVMKDEL--SEIRNPSTSDERLLELWANME 141
E+ L++L +D +A +++IA++ +HE +KDEL +E N + D++ EL A +E
Sbjct: 661 EADLQKL-KDELASTKRHIADLQDKHEALKDELDKTEDENDALRDKK-KELEAEIE 714
>SB_32223| Best HMM Match : SH3BP5 (HMM E-Value=0.12)
Length = 709
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 516 PEALPQDESVEEPPPAQQPEDVEEE 540
P+ + Q +S+EE PPA QPED +E
Sbjct: 502 PKVVTQTQSLEETPPAPQPEDHTQE 526
>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
Length = 432
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 715 PGYSVVVKRPMDLTTIRRNIDNGNIRTTAEFQRDVLLMLSNALIYN 760
P Y + PMDL+ ++ + + + EF RD+ L+ SN +N
Sbjct: 2 PEYYKQIANPMDLSIVKEKLHSYQYHSVVEFVRDMNLIFSNCKDFN 47
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 695 RLCAHKYASLFLRPISDEEAPGYSVVVKR---PMDLTTIRRNIDNGNIRTTAEFQRDVLL 751
+LC + +L+ + +E GY V P DL +R + R +F D+LL
Sbjct: 984 KLCCQEENPKWLQEMQEEMQAGYQRVEFENGTPKDLDAVRAKVKENAYRVVGDFCHDMLL 1043
Query: 752 MLSNALIYNSTEH 764
+L+ T H
Sbjct: 1044 ILNKVCKIRVTNH 1056
>SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1)
Length = 99
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 689 VMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKRPMDLTTIRRNIDN 736
+M RLC A F+ P+ + P Y VV P+DL TI + N
Sbjct: 48 IMGCVDRLCELSLAGPFVYPVDVQAYPDYWSVVPYPIDLHTIIEKLGN 95
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 62 YGTLLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELS 121
YG ++ +R+ + +GG + +RL + ++A++QK I+++ +EV+ ++ +
Sbjct: 172 YGGPMDDFSRKRRRDSSGEGGDYLQLKDENERLHR-QVADLQKQISDLKATNEVLLEQNA 230
Query: 122 EIRNPSTS 129
RN + S
Sbjct: 231 RYRNQANS 238
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.5 bits (68), Expect = 2.8
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 67 EHVETPKRKKRNS-DGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEIRN 125
E ++ ++++R+S D G+ E + ++L + +I+ E+ +Q E ++DEL E
Sbjct: 1027 EFIQVLEQERRSSPDSGMSEALEELRQKLEAEHQEDIEATRKELIEQVESLRDELQEAAT 1086
Query: 126 PSTSDER 132
D +
Sbjct: 1087 RDIEDAK 1093
>SB_30757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 65 LLEHVETPKRKKRNSDGGVETPQESILKRLTQDRIAEIQKNIAEMSQQHEVMKDELSEI 123
L HV++P+ +KR SD + P+ LK Q ++A ++ ++ Q+ ++ E+
Sbjct: 11 LSTHVDSPRGQKRASDDDLADPERKRLKDAYQQQVAHERQERRKVEQESAELRASNEEL 69
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 96 QDRIAEIQKNIAEMSQQHEVMKDELSEIRNP-STSDERLLELWANME 141
Q+ ++ +Q+N + + EVMK+E S + ST + L+EL ++++
Sbjct: 318 QEEVSTVQRNYERLESRLEVMKEEKSRLEETISTHRKELIELKSSVK 364
>SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18)
Length = 458
Score = 30.3 bits (65), Expect = 6.5
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 695 RLCAHKYASLFLRPISDEEAPGYSVVVKR---PMDLTTIRRNIDNGNIRTTAEFQRDVLL 751
+LC + +L+ + +E GY V P DL +R + R +F D+LL
Sbjct: 325 KLCCQEENPKWLQEMQEEMQAGYQRVEFENGTPKDLDAVRAKVKENAYRVVGDFCHDMLL 384
Query: 752 MLSNALIYNSTEHSVHSMA 770
+L+ + V + A
Sbjct: 385 ILNKVCKITGNQPLVRNAA 403
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 671 DSPSGNDAERQHRLWRKS-------VMLVYSRLCAHKYASLFLRPISDEEAPGYSVVVKR 723
+ G++ E +H + RK + + + H A FL P++ ++ P Y ++++
Sbjct: 1275 EDEEGDNQETRHHINRKQQSKDMAPCRTILAEMEKHDDAWPFLIPVNAKQFPEYYKIIRK 1334
Query: 724 PMDLTTIR 731
PMD T++
Sbjct: 1335 PMDFHTMK 1342
>SB_47486| Best HMM Match : Mic1 (HMM E-Value=7.8)
Length = 263
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 54 PPDCCAAQYGTLLEH-VETPKRKKRNSDGGVETPQE 88
PPD C A+ L+H V+T + KRN +TP++
Sbjct: 142 PPDSCFARVINALQHEVQTKRLAKRNLSSEEDTPKQ 177
>SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34)
Length = 572
Score = 29.9 bits (64), Expect = 8.6
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 38 WMSVSRALKTLGEPNRPPDCCAAQYGTLLEHVETPKRKKRNSDGGVETPQE--SILKRLT 95
W++ K EP+R P CAAQ + ++T KR K D + + + ++LK+
Sbjct: 225 WLNDITHGKDFDEPSRAPS-CAAQKTESSDILDTLKRTKEYYDEMITSYERKVTLLKQKI 283
Query: 96 QDRIAEIQKNIAEMSQQHE 114
D+ +E++K + + HE
Sbjct: 284 VDQGSELKKLYSLLDILHE 302
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.126 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,600,155
Number of Sequences: 59808
Number of extensions: 607334
Number of successful extensions: 1742
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1709
Number of HSP's gapped (non-prelim): 42
length of query: 820
length of database: 16,821,457
effective HSP length: 88
effective length of query: 732
effective length of database: 11,558,353
effective search space: 8460714396
effective search space used: 8460714396
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 64 (29.9 bits)
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