GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001665-TA|BGIBMGA001665-PA|IPR011497|Protease inhibitor,
Kazal-type
         (153 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC084578-1|AAH84578.1|  719|Homo sapiens AGRN protein protein.         37   0.033
AL645608-12|CAI15575.2| 2045|Homo sapiens agrin protein.               37   0.033
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.      37   0.033
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.                37   0.033

>BC084578-1|AAH84578.1|  719|Homo sapiens AGRN protein protein.
          Length = 719

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 59  LCPSSCPALNVMVCAECGHGIYRTFLSVCHMRMFRCRHHEENIQLASREPC 109
           +CPS C AL   VC   GH    T+ S C + +  C  H+ ++ +AS  PC
Sbjct: 36  VCPSECVALAQPVCGSDGH----TYPSECMLHVHACT-HQISLHVASAGPC 81


>AL645608-12|CAI15575.2| 2045|Homo sapiens agrin protein.
          Length = 2045

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 59  LCPSSCPALNVMVCAECGHGIYRTFLSVCHMRMFRCRHHEENIQLASREPC 109
           +CPS C AL   VC   GH    T+ S C + +  C  H+ ++ +AS  PC
Sbjct: 554 VCPSECVALAQPVCGSDGH----TYPSECMLHVHACT-HQISLHVASAGPC 599


>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
          Length = 2026

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 59  LCPSSCPALNVMVCAECGHGIYRTFLSVCHMRMFRCRHHEENIQLASREPC 109
           +CPS C AL   VC   GH    T+ S C + +  C  H+ ++ +AS  PC
Sbjct: 535 VCPSECVALAQPVCGSDGH----TYPSECMLHVHACT-HQISLHVASAGPC 580


>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
          Length = 2045

 Score = 36.7 bits (81), Expect = 0.033
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 59  LCPSSCPALNVMVCAECGHGIYRTFLSVCHMRMFRCRHHEENIQLASREPC 109
           +CPS C AL   VC   GH    T+ S C + +  C  H+ ++ +AS  PC
Sbjct: 554 VCPSECVALAQPVCGSDGH----TYPSECMLHVHACT-HQISLHVASAGPC 599


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.133    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,419,188
Number of Sequences: 224733
Number of extensions: 591511
Number of successful extensions: 1932
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1929
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 73,234,838
effective HSP length: 84
effective length of query: 69
effective length of database: 54,357,266
effective search space: 3750651354
effective search space used: 3750651354
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 61 (28.7 bits)