GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001664-TA|BGIBMGA001664-PA|IPR005829|Sugar transporter
superfamily, IPR007114|Major facilitator superfamily, IPR003663|Sugar
transporter, IPR005828|General substrate transporter
         (469 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       26   1.9  
AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      26   1.9  

>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 362 VSYLCIALVVLFVTMFAIGPGSIPWFLVTELFNQSSRPAASS 403
           +++LC+ALVV+  +      G +P +   +   +S +P +SS
Sbjct: 8   LAFLCLALVVVVQSAPQYARGDVPTYDEEDFDEESLKPHSSS 49


>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 362 VSYLCIALVVLFVTMFAIGPGSIPWFLVTELFNQSSRPAASS 403
           +++LC+ALVV+  +      G +P +   +   +S +P +SS
Sbjct: 8   LAFLCLALVVVVQSAPQYARGDVPTYDEEDFDEESLKPHSSS 49


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.135    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,205
Number of Sequences: 2123
Number of extensions: 11896
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 2
length of query: 469
length of database: 516,269
effective HSP length: 66
effective length of query: 403
effective length of database: 376,151
effective search space: 151588853
effective search space used: 151588853
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 50 (24.2 bits)