BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001663-TA|BGIBMGA001663-PA|IPR007087|Zinc finger, C2H2-type (309 letters) Database: tribolium 317 sequences; 114,650 total letters Searching....................................................done Score E Sequences producing significant alignments: (bits) Value AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 53 3e-09 AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 52 4e-09 AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 49 5e-08 L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 42 6e-06 AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 34 0.002 L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 33 0.002 X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 30 0.025 DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 29 0.033 L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 28 0.076 U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 2.2 DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 23 3.8 AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 22 5.0 AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 5.0 AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 8.7 >AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein protein. Length = 370 Score = 52.8 bits (121), Expect = 3e-09 Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 166 FVCHHCGVSFKMRYCIKDHLRRR--HAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYC 223 F C C SF ++ +++H R P +C C+K F R L H RL H P C Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRL-HTGERPYRC 193 Query: 224 VECDKHFTDVYKYRRHL 240 CD+ F V RRHL Sbjct: 194 EHCDRQFVQVANLRRHL 210 Score = 49.2 bits (112), Expect = 4e-08 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 10/132 (7%) Query: 88 YICDICESNFPDKLRLKMHIASHF--DVYECQYCRQICQGDSSKGRHVREHGA--VLQCL 143 + C++C +F K L+ H +H +ECQ C + D H+R H +C Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE 194 Query: 144 KCDAKFSERRDFYAHHRRLH---EIFVCHHCGVSFKMRYCIKDH--LRRRHAPKKCTCCN 198 CD +F + + H R+H + C HC + F +K H + P +C C Sbjct: 195 HCDRQFVQVANL-RRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNEKPFECDKCR 253 Query: 199 KTFARYKSLWMH 210 F R L H Sbjct: 254 GRFRRRHHLVHH 265 Score = 45.2 bits (102), Expect = 6e-07 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 7/104 (6%) Query: 142 CLKCDAKFSERRDFYAHHRRLH---EIFVCHHCGVSFKMRYCIKDHLRRR--HAPKKCTC 196 C C+ F + +H R H + F C C F + +K H+R P +C Sbjct: 137 CEVCNRSFGYKH-VLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCEH 195 Query: 197 CNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHL 240 C++ F + +L H R+ H P C C F+D + + H+ Sbjct: 196 CDRQFVQVANLRRHLRV-HTGERPYGCEHCSMKFSDSNQLKAHV 238 Score = 39.1 bits (87), Expect = 4e-05 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Query: 181 IKDHLRRRHAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHL 240 +KD R R P C CN++F YK + + +H P C EC K FT + + H+ Sbjct: 126 VKDSSRDR--PFTCEVCNRSFG-YKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHM 182 >AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein protein. Length = 392 Score = 52.4 bits (120), Expect = 4e-09 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%) Query: 116 CQYCRQICQGDSSKGRHVREHGAV--LQCLKCDAKFSERRDFYAHHRRL--HEIFVCHHC 171 C+ C + S+ H+R H +C+ C+ FS+ + AH R + F C C Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVC 311 Query: 172 GVSFKMRYCIKDHLRRRHA--PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKH 229 F + H+R P +C C K F+ +L H R+ H+ P C C Sbjct: 312 DRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRI-HSGEKPYECKLCLLR 370 Query: 230 FTDVYKYRRHL 240 F+ RH+ Sbjct: 371 FSQSGNLNRHM 381 Score = 50.4 bits (115), Expect = 2e-08 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Query: 167 VCHHCGVSFKMRYCIKDHLRRR--HAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCV 224 VC CG S+ +K HLR P +C CNK+F++ +L H R +H+ P C Sbjct: 251 VCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR-THSGEKPFRCP 309 Query: 225 ECDKHFTDVYKYRRHL 240 CD+ F+ H+ Sbjct: 310 VCDRRFSQSSSVTTHM 325 Score = 49.6 bits (113), Expect = 3e-08 Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 9/157 (5%) Query: 71 RVQRAIGLLLSGTKRLSYICDICESNFPDKLRLKMHIASHF--DVYECQYCRQICQGDSS 128 R + +I LL ++ + +C IC ++ LK H+ +H Y C C + ++ Sbjct: 234 RRRHSINLLEEDNQKPN-VCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAAN 292 Query: 129 KGRHVREHGA--VLQCLKCDAKFSERRDFYAHHRRL--HEIFVCHHCGVSFKMRYCIKDH 184 HVR H +C CD +FS+ H R + C C +F + H Sbjct: 293 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKH 352 Query: 185 LR--RRHAPKKCTCCNKTFARYKSLWMHTRLSHASAV 219 LR P +C C F++ +L H R+ A+++ Sbjct: 353 LRIHSGEKPYECKLCLLRFSQSGNLNRHMRVHGAASM 389 Score = 39.1 bits (87), Expect = 4e-05 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 191 PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHL 240 P C C K++AR +L H R +H+ P C++C+K F+ H+ Sbjct: 249 PNVCRICGKSYARPSTLKTHLR-THSGEKPYRCIDCNKSFSQAANLTAHV 297 >AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein protein. Length = 136 Score = 48.8 bits (111), Expect = 5e-08 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 132 HVREHGAV--LQCLKCDAKFSERRDFYAHHRRL--HEIFVCHHCGVSFKMRYCIKDHLRR 187 H+R H +C+ C+ FS+ + AH R + F C C F + H+R Sbjct: 12 HLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRT 71 Query: 188 RHA--PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHL 240 P +C C K F+ +L H R+ H+ P C C F+ RH+ Sbjct: 72 HSGERPYRCRLCKKAFSDSSTLTKHLRI-HSGEKPYECKLCLLRFSQSGNLNRHM 125 Score = 41.1 bits (92), Expect = 1e-05 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 181 IKDHLRRRHA--PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRR 238 +K HLR P +C CNK+F++ +L H R +H+ P C CD+ F+ Sbjct: 9 LKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVR-THSGEKPFRCPVCDRRFSQSSSVTT 67 Query: 239 HL 240 H+ Sbjct: 68 HM 69 Score = 36.7 bits (81), Expect = 2e-04 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 88 YICDICESNFPDKLRLKMHIASHFDV--YECQYCRQICQGDSSKGRHVREHGA 138 Y C +C+ F D L H+ H YEC+ C + RH+R HGA Sbjct: 78 YRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRVHGA 130 >L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein protein. Length = 74 Score = 41.9 bits (94), Expect = 6e-06 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 191 PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHL 240 P +C C+K F R L H RL H P C CD+ F V RRHL Sbjct: 9 PFECQECHKRFTRDHHLKTHMRL-HTGERPYRCEHCDRQFVQVANLRRHL 57 Score = 34.7 bits (76), Expect = 9e-04 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Query: 166 FVCHHCGVSFKMRYCIKDHLRRR--HAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYC 223 F C C F + +K H+R P +C C++ F + +L H R+ H P C Sbjct: 10 FECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRV-HTGERPYGC 68 Query: 224 VEC 226 C Sbjct: 69 EHC 71 Score = 29.5 bits (63), Expect = 0.033 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Query: 114 YECQYCRQICQGDSSKGRHVREHGA--VLQCLKCDAKFSERRDFYAHHRRLH---EIFVC 168 +ECQ C + D H+R H +C CD +F + + H R+H + C Sbjct: 10 FECQECHKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANL-RRHLRVHTGERPYGC 68 Query: 169 HHCGV 173 HC + Sbjct: 69 EHCSM 73 Score = 24.6 bits (51), Expect = 0.93 Identities = 9/27 (33%), Positives = 13/27 (48%) Query: 214 SHASAVPAYCVECDKHFTDVYKYRRHL 240 +H P C EC K FT + + H+ Sbjct: 3 THTGEKPFECQECHKRFTRDHHLKTHM 29 >AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein protein. Length = 314 Score = 33.9 bits (74), Expect = 0.002 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 191 PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGPKHKP 247 P +C C++ + +L MH R +H P C C + FT + H+ + KP Sbjct: 134 PNQCVICHRVLSCKSALQMHYR-THTGERPFKCKICGRAFTTKGNLKTHMGVHRAKP 189 Score = 30.7 bits (66), Expect = 0.014 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 8/81 (9%) Query: 141 QCLKCDAKFSERRDFYAHHRRL--HEIFVCHHCGVSFKMRYCIKDHL--RRRHAPKK--- 193 QC+ C S + H+R F C CG +F + +K H+ R P + Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLH 195 Query: 194 -CTCCNKTFARYKSLWMHTRL 213 C C+K F L H RL Sbjct: 196 QCPVCHKKFTNALVLQQHIRL 216 Score = 24.6 bits (51), Expect = 0.93 Identities = 9/26 (34%), Positives = 14/26 (53%) Query: 85 RLSYICDICESNFPDKLRLKMHIASH 110 R+ + C +C F + L L+ HI H Sbjct: 192 RVLHQCPVCHKKFTNALVLQQHIRLH 217 Score = 22.6 bits (46), Expect = 3.8 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 6/53 (11%) Query: 90 CDICESNFPDKLRLKMHIASHFD------VYECQYCRQICQGDSSKGRHVREH 136 C IC F K LK H+ H +++C C + +H+R H Sbjct: 165 CKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLH 217 >L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein protein. Length = 46 Score = 33.5 bits (73), Expect = 0.002 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 185 LRRRHAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHF 230 +R P KCT C K F+R L H R +H P C C++ F Sbjct: 1 IRTHTLPCKCTICPKAFSRPWLLQGHIR-THTGEKPFSCTYCNRAF 45 Score = 27.9 bits (59), Expect = 0.10 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 168 CHHCGVSFKMRYCIKDHLRRR--HAPKKCTCCNKTFA 202 C C +F + ++ H+R P CT CN+ FA Sbjct: 10 CTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNRAFA 46 >X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. Length = 524 Score = 29.9 bits (64), Expect = 0.025 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 7/82 (8%) Query: 84 KRLSYICDICESNFPDKLRLKMHIASHFDV--YECQYCRQICQGDSSKGRHVREHGAVLQ 141 KRL+ C C K L+ H+ +H ++C C C S H++ H V + Sbjct: 229 KRLT--CPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYR 286 Query: 142 CLKCDAKFSERRDFYAHHRRLH 163 D ++ + Y H ++H Sbjct: 287 YSCRDCSYATK---YCHSLKIH 305 Score = 28.3 bits (60), Expect = 0.076 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 90 CDICESNFPDKLRLKMHIASHFDV--YECQYCRQICQGDSSKGRHVREHG 137 C+ C+ +K L H+ SH +V Y C+ C + S H+R +G Sbjct: 261 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRRYG 310 Score = 23.8 bits (49), Expect = 1.6 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Query: 124 QGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYAH--HRRLHEIFVCHHCGVSFKMRYCI 181 + DS+ + E + C C+ F + + H + H F C+ CGV + Sbjct: 458 ESDSNNNNNKEEGNS---CQYCNIAFGDAVLYTIHMGYHGFHNPFTCNMCGVECSDKVSF 514 Query: 182 KDHLRR 187 H+ R Sbjct: 515 FLHIAR 520 >DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped protein. Length = 126 Score = 29.5 bits (63), Expect = 0.033 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 2/47 (4%) Query: 166 FVCHHCGVSFKMRYCIKDHLRRR--HAPKKCTCCNKTFARYKSLWMH 210 F+C +C F Y + H R P C C K F R L H Sbjct: 80 FICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126 Score = 29.1 bits (62), Expect = 0.043 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 88 YICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREH 136 +IC C F L +H +H D E Y IC + H+R+H Sbjct: 80 FICKYCNRQFTKSYNLLIHERTHTD--ERPYSCDICGKAFRRQDHLRDH 126 Score = 28.3 bits (60), Expect = 0.076 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 194 CTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRH 239 C CN+ F + +L +H R +H P C C K F R H Sbjct: 82 CKYCNRQFTKSYNLLIHER-THTDERPYSCDICGKAFRRQDHLRDH 126 >L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein protein. Length = 69 Score = 28.3 bits (60), Expect = 0.076 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 100 KLRLKMHIASHFDV--YECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYA 157 K L+ H+ +H ++C C C S H++ H V + D ++ + Y Sbjct: 1 KHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATK---YC 57 Query: 158 HHRRLH 163 H ++H Sbjct: 58 HSLKIH 63 Score = 28.3 bits (60), Expect = 0.076 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 90 CDICESNFPDKLRLKMHIASHFDV--YECQYCRQICQGDSSKGRHVREHG 137 C+ C+ +K L H+ SH +V Y C+ C + S H+R +G Sbjct: 19 CNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRRYG 68 >U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. Length = 470 Score = 23.4 bits (48), Expect = 2.2 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 71 RVQRAIGLLLSGTKRLSYICDICE-SNFPDKLRLKMHIASHFDVYECQYCR 120 RV R +G + R ++ + SN D L HI++ F YE Y R Sbjct: 299 RVMRELGRIFRAYCRENHASWVNHLSNIEDCLNYVPHISTGFSPYEILYGR 349 >DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like protein protein. Length = 135 Score = 22.6 bits (46), Expect = 3.8 Identities = 6/16 (37%), Positives = 12/16 (75%) Query: 192 KKCTCCNKTFARYKSL 207 K+C CC ++F R +++ Sbjct: 79 KECYCCRESFLRERTI 94 >AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger protein protein. Length = 456 Score = 22.2 bits (45), Expect = 5.0 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%) Query: 81 SGTKRLSYICDICESNFPDKLRLKMHIASH 110 +G KR + C IC F L H+ +H Sbjct: 370 TGEKR--FACPICNKRFMRSDHLAKHVKTH 397 >AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein protein. Length = 1156 Score = 22.2 bits (45), Expect = 5.0 Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 138 AVLQCLKCDAKFSERRDFYAH 158 AVL C CD FS ++ H Sbjct: 546 AVLTCKVCDQAFSSLKELSNH 566 Score = 21.4 bits (43), Expect = 8.7 Identities = 6/26 (23%), Positives = 14/26 (53%) Query: 138 AVLQCLKCDAKFSERRDFYAHHRRLH 163 ++++C CD F + + H ++H Sbjct: 1052 SIMKCAFCDTPFISKGAYRHHLSKMH 1077 >AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nuclear receptor protein. Length = 407 Score = 21.4 bits (43), Expect = 8.7 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 12/41 (29%) Query: 80 LSGTKRLSYICDICESNFPDKLRLKMHIASHFDVYECQYCR 120 LSG+K L C IC K H+ VY C+ C+ Sbjct: 79 LSGSKHL---CSICGDRASGK---------HYGVYSCEGCK 107 Database: tribolium Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 114,650 Number of sequences in database: 317 Lambda K H 0.326 0.139 0.450 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 78,585 Number of Sequences: 317 Number of extensions: 3542 Number of successful extensions: 67 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 8 Number of HSP's gapped (non-prelim): 40 length of query: 309 length of database: 114,650 effective HSP length: 57 effective length of query: 252 effective length of database: 96,581 effective search space: 24338412 effective search space used: 24338412 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.7 bits) S2: 43 (21.4 bits)
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