Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001663-TA|BGIBMGA001663-PA|IPR007087|Zinc finger,
C2H2-type
(309 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 40 3e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 39 8e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 37 0.004
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 36 0.010
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.052
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 30 0.36
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.48
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.64
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 29 0.64
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 29 1.1
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 28 1.5
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 28 1.9
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 27 3.4
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.5
SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.9
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 26 7.8
SPCC965.08c |alr1||alanine racemase Alr1|Schizosaccharomyces pom... 26 7.8
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 171 CGVSFKMRYCIKDHLRRR--HAPKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDK 228
C F Y +K H+ + P +C+ C K+FAR H +L H CV C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL-HTGIKAFACVTCNQ 635
Query: 229 HFTDVYKYRRH 239
F + RH
Sbjct: 636 RFARMDALNRH 646
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 87 SYICDI--CESNFPDKLRLKMHIASH--FDVYECQYCRQICQGDSSKGRHVREHGAV--L 140
+Y+C C F LK H+ +H + ++C C++ K RH + H +
Sbjct: 569 NYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAF 628
Query: 141 QCLKCDAKFSERRDFYAHHR 160
C+ C+ +F+ H++
Sbjct: 629 ACVTCNQRFARMDALNRHYK 648
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 39.1 bits (87), Expect = 8e-04
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 166 FVCHHCGVSFKMRYCIKDHLRRRHAPKK-CTC-CNKTFARYKSLWMHTRLSHASAVP 220
FVC C FK ++ H+R H +K C C K F+R +L H RL H +A P
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERL-HVNASP 478
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 194 CTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRH 239
C C+K F R + L H R H S P C+ C K F+ R+H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQH 469
Score = 29.5 bits (63), Expect = 0.64
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 137 GAVLQCLKCDAKFSERRDFYAHHRRLH---EIFVCHHCGVSFKMRYCIKDHLRRR-HAPK 192
G C +C KF H R LH + FVC CG F R ++ H R +A
Sbjct: 420 GKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Query: 193 KCTCCNKTFARYKS 206
+ C + Y S
Sbjct: 479 RLACFFQPSGYYSS 492
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 36.7 bits (81), Expect = 0.004
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 166 FVCHH--CGVSFKMRYCIKDHLRRRHA--PKKCTCCNKTFARYKSLWMHTRLSHASAVPA 221
+VC + C +Y ++ H++ + P +C C F R+ L H R+ H + P
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRI-HENGRPY 501
Query: 222 YCVECDKHFTDVYKYRRH 239
C EC K F + RH
Sbjct: 502 VC-ECLKRFNRLDALNRH 518
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 35.5 bits (78), Expect = 0.010
Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 23/169 (13%)
Query: 93 CESNFPDKLRLKMHIAS---HFDVYECQY--CRQICQGDSSKGRHV-REHGAVLQ----- 141
C+ F +L+ HI++ H Y C Y C HV R H ++
Sbjct: 120 CDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPH 179
Query: 142 --CLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFK----MRYCIKDHLRRRHAPKKCT 195
C+ + F + H R H + C CG FK +R+ + H K
Sbjct: 180 ESCVGHEG-FEKWSQLQNHIREAH-VPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYH 237
Query: 196 C----CNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHL 240
C C K+F R +L H + H + +C C F + +RHL
Sbjct: 238 CPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
Score = 28.3 bits (60), Expect = 1.5
Identities = 36/146 (24%), Positives = 51/146 (34%), Gaps = 22/146 (15%)
Query: 57 ECEAMLKRIDDFYNRVQRAIGLLLSGTKRLSYIC--DIC--ESNFPDKLRLKMHIASHFD 112
+CE N V RA K +SY C + C F +L+ HI
Sbjct: 150 DCELRFATKQKLQNHVNRA------HEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH- 202
Query: 113 VYECQYCRQICQGDSSKGRHVREHGAVLQCLK--------CDAKFSERRDFYAHHRRLHE 164
V C C + + + HV H L+ K C F+ H +HE
Sbjct: 203 VPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHE 262
Query: 165 ---IFVCHHCGVSFKMRYCIKDHLRR 187
F C CG F ++ ++ HL R
Sbjct: 263 GNMAFHCDSCGTKFGYKHMLQRHLER 288
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.1 bits (72), Expect = 0.052
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 114 YECQYCRQICQGDSSKGRHVREHGA--VLQCL--KCDAKFSERRDFYAHHRRLH 163
YEC +C+++ + RH+R H +C C +F+ RRD H R H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFT-RRDELIRHVRTH 56
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 87 SYICDICESNFPDKLRLKMHIASHF--DVYECQY--CRQICQGDSSKGRHVREH 136
SY C C+ F + HI SH +EC Y C++ RHVR H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 30.3 bits (65), Expect = 0.36
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 193 KCTCCNKTFARYKSLWMHTRLSHASAVPAYC--VECDKHFTDVYKYRRH 239
+CT C + F+R SL +HT SH P C C K F RRH
Sbjct: 469 RCTECLQGFSRPSSLKIHT-YSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 81 SGTKRLSYICDICESNFPDKLRLKMHIASHFD--VYECQY--CRQICQGDSSKGRHVREH 136
S + Y C C F LK+H SH + C Y C + S+ RH R H
Sbjct: 461 SSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Query: 137 G 137
G
Sbjct: 521 G 521
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 29.9 bits (64), Expect = 0.48
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 145 CDAKFSERRDFYAHHRRLH---EIFVCHHCGVSFKMRYCIKDHLRRRHAPKKCTCCNKTF 201
C F+ R++ H R H + F+C HC SF + H+ ++H K+ ++T
Sbjct: 24 CTKSFT-RKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHV-KQNDAGSQTH 81
Query: 202 ARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGP 243
++ + + P+Y VE D + H++ P
Sbjct: 82 PKHDKTLISSS-DQELPFPSY-VEADVQDAAYTDLKSHIDQP 121
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.5 bits (63), Expect = 0.64
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 191 PKKCTCCNKTFARYKSLWMHTRLSHASAVPAYCV--ECDKHFTDVYKYRRH 239
P KC C K F R + H R +H P C C K F+ + RH
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIR-THTGEKPHVCTFPGCAKRFSRSDELTRH 74
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 29.5 bits (63), Expect = 0.64
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 194 CTCCNKTFARYKSLWMHTRLSHASAVPAYCVECD 227
C C + FAR + L H R SH + P C E D
Sbjct: 72 CETCTRAFARLEHLKRHIR-SHTNEKPFTCSEID 104
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 88 YICDICESNFPDKLRLKMHIASH 110
Y+C+ C F LK HI SH
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSH 92
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 220 PAYCVECDKHFTDVYKYRRHLNGPKHKPGKKRRSWSI 256
P C+ C+K+F + H N KHK ++ + I
Sbjct: 269 PIMCMVCNKNFRSQNQLENHENSKKHKKNLRKMNQEI 305
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 159 HRRLHEIFVCHH--CGVSFKMRYCIKDHLRRRHAPK--KCTCCNKTFARYKSLWMHTRLS 214
HR F C + C SF + ++ H R K C+ CN+ FAR L H +
Sbjct: 19 HRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQM 78
Query: 215 H 215
H
Sbjct: 79 H 79
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 194 CTCCNKTFARYKSLWMHTRLSHASAVPAYCVECD 227
C C K F R+++L H + H+ A P C C+
Sbjct: 33 CDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCE 65
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 3.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 194 CTCCNKTFARYKSLWMHTRLSH 215
C C+ TF K LW H + +H
Sbjct: 60 CLFCDSTFTCLKDLWSHCKEAH 81
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 188 RHAPKKCTCCN-KTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYK-YRRH 239
RH + CT CN K R + H ++ + +P YC + D Y+ +R H
Sbjct: 1413 RHCDEDCTVCNRKKACRLWNFKPHWQV--ITRIPQYCHDTHYGVYDAYRDFRSH 1464
>SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 103
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 213 LSHASAVPAYCVECDKHFTDVYKYRRHLNGPKHKPGKKRR 252
LS A+ + YC+ ++ F YRR + P+ K K RR
Sbjct: 21 LSVANKIMFYCILNERAFKHYKTYRRITDCPEIKNKKSRR 60
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 82 GTKRLSYICDICESNFPDKLRLKMHIASHFDVY 114
G RL + D+C+ + PD+ + ++A +F +
Sbjct: 197 GIPRLIEVEDVCDVDRPDERSIMTYVAEYFHAF 229
>SPCC965.08c |alr1||alanine racemase Alr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 375
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 52 IEICLECEAMLKRIDDFYNRVQRAIGLLLSGTKRLSYICDICESNFPDKLRLKMHIASHF 111
+EI L+ ++ + R+ ++ + LL S K +S I I F D L H +
Sbjct: 126 VEIWLKLDSGMNRLGFTPSQFMKFYNLL-SNNKNVSNIGKITHFAFADMLENPEHTLKQW 184
Query: 112 DVYE 115
D++E
Sbjct: 185 DIFE 188
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.326 0.139 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,466,419
Number of Sequences: 5004
Number of extensions: 62099
Number of successful extensions: 192
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 162
Number of HSP's gapped (non-prelim): 34
length of query: 309
length of database: 2,362,478
effective HSP length: 73
effective length of query: 236
effective length of database: 1,997,186
effective search space: 471335896
effective search space used: 471335896
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 54 (25.8 bits)
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