Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001663-TA|BGIBMGA001663-PA|IPR007087|Zinc finger,
C2H2-type
(309 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 40 0.003
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 40 0.003
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 40 0.003
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 40 0.003
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 40 0.003
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 39 0.004
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 38 0.006
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 38 0.006
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 38 0.006
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 38 0.009
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 38 0.009
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 38 0.011
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 38 0.011
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 37 0.020
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 37 0.020
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 32 0.42
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 32 0.42
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 32 0.42
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 32 0.56
At5g02330.1 68418.m00156 DC1 domain-containing protein contains ... 31 0.74
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 31 0.98
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 31 0.98
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 31 0.98
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 31 0.98
At1g02770.1 68414.m00231 expressed protein contains Pfam profile... 31 0.98
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 31 1.3
At5g36860.1 68418.m04416 Ulp1 protease family protein contains P... 30 1.7
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to... 30 1.7
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 29 3.0
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 29 3.0
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 29 4.0
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 29 5.2
At3g19680.1 68416.m02493 expressed protein 29 5.2
At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein ... 29 5.2
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 29 5.2
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 29 5.2
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 29 5.2
At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 28 6.9
At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identic... 28 6.9
At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identic... 28 6.9
At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein ... 28 6.9
At1g09400.1 68414.m01051 12-oxophytodienoate reductase, putative... 28 6.9
At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /... 28 9.1
At4g09310.1 68417.m01539 SPla/RYanodine receptor (SPRY) domain-c... 28 9.1
At4g09200.1 68417.m01522 SPla/RYanodine receptor (SPRY) domain-c... 28 9.1
At3g08670.1 68416.m01007 expressed protein 28 9.1
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 28 9.1
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 17/152 (11%)
Query: 85 RLSYICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRH-VREHGAVLQCL 143
+ ++ C IC F L+MH+ +H D Y+ + KG + +++H C
Sbjct: 214 KYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKH--YYSCP 271
Query: 144 KCDAKFSERRDFYA----------HHRRLH--EIFVCHHCGVS-FKMRYCIKDHLRRRHA 190
+ ++++R + + H++R H ++++C C V F + ++ H +
Sbjct: 272 QHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGD 331
Query: 191 PKKCTCCNKTFARYKSLWMHTRLSHASAVPAY 222
K C F+R L H L VPA+
Sbjct: 332 IKWVCSCGTKFSRKDKLMSHVSL-FLGHVPAH 362
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 134 REHGAV-LQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLR 186
R+HG C KC F+ R D+ H + +++ C CG FK + +KDH++
Sbjct: 294 RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCI-CGSDFKHKRSLKDHIK 346
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 193 KCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGPKH 245
+C C K F R + L H ++S+ S C C KH R HLN P H
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDH 70
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 193 KCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGPKH 245
+C C K F R + L H ++S+ S C C KH R HLN P H
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDH 70
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 134 REHGAV-LQCLK-CDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLR 186
R+HGA +C K C+ F+ R D+ H + +++ C CG FK + +KDH+R
Sbjct: 179 RKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCV-CGSDFKHKRSLKDHVR 232
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 194 CTCCNKTFARYKSLWMH 210
C+ CNKTF R+ ++ MH
Sbjct: 103 CSVCNKTFNRFNNMQMH 119
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 39.1 bits (87), Expect = 0.004
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 14/134 (10%)
Query: 112 DVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSE-RRDFYA--HHRRLHEIFVC 168
D Y C+ C Q Q D + H R H + LK D K E R+ Y LH C
Sbjct: 37 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHH-DPC 95
Query: 169 HHCGVSFKMRYCIKDHLRRRHAPKK---CTCCNKTFARYKSLWMHTRLSHASAVPAYCVE 225
H G IK H RR+H+ K C C+K +A H + + + +
Sbjct: 96 HALGDLVG----IKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSR---GHSCD 148
Query: 226 CDKHFTDVYKYRRH 239
C + F+ V + H
Sbjct: 149 CGRVFSRVESFIEH 162
Score = 36.7 bits (81), Expect = 0.020
Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDA 147
Y+C+IC F L+MH H ++ R + K +V L C A
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRHKVPWKL-LKRDKKDEEVRKRVYVCPEPTCLHHDPCHA 97
Query: 148 KFSERRDFYAHHRRLHEI---FVCHHCGVSFKMRYCIKDHLRRRHAPKKCTCCNKTFARY 204
+ H RR H + +VC C + ++ K HL+ + C + F+R
Sbjct: 98 -LGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCDCGRVFSRV 156
Query: 205 KSLWMH 210
+S H
Sbjct: 157 ESFIEH 162
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 38.3 bits (85), Expect = 0.006
Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 112 DVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYA--HHRRLHEIFVCH 169
D Y C+ C Q Q D + H R H + LK D ++ Y LH CH
Sbjct: 65 DRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHH-NPCH 123
Query: 170 HCGVSFKMRYCIKDHLRRRHAPKK---CTCCNKTFARYKSLWMHTRLSHASAVPAYCVEC 226
G IK H RR+H+ K C C+K +A H + + +C
Sbjct: 124 ALGDLVG----IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK---TCGTRGHSCDC 176
Query: 227 DKHFTDVYKYRRH 239
+ F+ V + H
Sbjct: 177 GRVFSRVESFIEH 189
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDA 147
YIC+IC F L+MH H + ++ + K +V L C A
Sbjct: 67 YICEICNQGFQRDQNLQMHRRRH--KVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHA 124
Query: 148 KFSERRDFYAHHRRL---HEIFVCHHCGVSFKMRYCIKDHLRRRHAPKKCTCCNKTFARY 204
+ H RR H+ +VC C + ++ K HL+ C + F+R
Sbjct: 125 -LGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRV 183
Query: 205 KSLWMH 210
+S H
Sbjct: 184 ESFIEH 189
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 38.3 bits (85), Expect = 0.006
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 14/148 (9%)
Query: 87 SYICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRH---VREHGA-VLQC 142
++ C IC F L+MH+ H D Y+ +S G ++ + L C
Sbjct: 243 THFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGC 302
Query: 143 L--KCDAKFSERRDFYA---HHRRLH--EIFVCHHCGV-SFKMRYCIKDHLRRRHAPKKC 194
K KF + H++R H + F C C F + +K H + K
Sbjct: 303 KRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWL 362
Query: 195 TCCNKTFARYKSLWMHTRL--SHASAVP 220
C TF+R L+ H L H A+P
Sbjct: 363 CSCGTTFSRKDKLFGHIALFQGHTPAIP 390
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 38.3 bits (85), Expect = 0.006
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 14/148 (9%)
Query: 87 SYICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRH---VREHGA-VLQC 142
++ C IC F L+MH+ H D Y+ +S G ++ + L C
Sbjct: 243 THFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGC 302
Query: 143 L--KCDAKFSERRDFYA---HHRRLH--EIFVCHHCGV-SFKMRYCIKDHLRRRHAPKKC 194
K KF + H++R H + F C C F + +K H + K
Sbjct: 303 KRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWL 362
Query: 195 TCCNKTFARYKSLWMHTRL--SHASAVP 220
C TF+R L+ H L H A+P
Sbjct: 363 CSCGTTFSRKDKLFGHIALFQGHTPAIP 390
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/54 (33%), Positives = 24/54 (44%)
Query: 193 KCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGPKHK 246
KC C + F + + L H ++S+ S C C KH R HL GP K
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPK 69
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 37.9 bits (84), Expect = 0.009
Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 112 DVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYA--HHRRLHEIFVCH 169
D Y C+ C Q Q D + H R H + LK + R+ Y LH CH
Sbjct: 68 DRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHH-NPCH 126
Query: 170 HCGVSFKMRYCIKDHLRRRHAPKK---CTCCNKTFARYKSLWMHTRLSHASAVPAYCVEC 226
G IK H RR+H+ K C C+K +A H + + +C
Sbjct: 127 ALGDLVG----IKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLK---TCGTRGHSCDC 179
Query: 227 DKHFTDVYKYRRH 239
+ F+ V + H
Sbjct: 180 GRVFSRVESFIEH 192
Score = 34.7 bits (76), Expect = 0.080
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 6/126 (4%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDA 147
Y+C+IC F L+MH H + ++ + K +V L C A
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRH--KVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHA 127
Query: 148 KFSERRDFYAHHRRL---HEIFVCHHCGVSFKMRYCIKDHLRRRHAPKKCTCCNKTFARY 204
+ H RR H+ ++C C + ++ K HL+ C + F+R
Sbjct: 128 -LGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRV 186
Query: 205 KSLWMH 210
+S H
Sbjct: 187 ESFIEH 192
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 134 REHGA-VLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLR 186
R+HG C +C F+ + D+ H + +++ C CG FK + +KDH++
Sbjct: 333 RKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCS-CGSDFKHKRSLKDHVK 385
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 134 REHGAV-LQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLR 186
R+HG+ C KC + + D+ H + +++ C CG FK + +KDH+R
Sbjct: 258 RKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCT-CGSDFKHKRSLKDHIR 310
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 194 CTCCNKTFARYKSLWMH 210
C+ C+KTF RY ++ MH
Sbjct: 182 CSICSKTFNRYNNMQMH 198
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 193 KCTCCNKTFARYKSLWMHTRLSHASAVPAYCVECDKHFTDVYKYRRHLNGPKHK 246
KC C + F + + L H R+S+ S C C+KH R HL GP K
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPK 60
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 134 REHGAV-LQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLR 186
R+HG+ C C F+ + D+ H + +++ C CG FK + +KDH++
Sbjct: 255 RKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCS-CGSDFKHKRSLKDHVK 307
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 32.3 bits (70), Expect = 0.42
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 93 CESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHG-----AVLQC--LKC 145
C F ++ LK HI S C+ C + K RH+R H ++C C
Sbjct: 254 CMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKNIK-RHLRTHDEDSSPGEIKCEVEGC 312
Query: 146 DAKFSERRDFYAHHRRLHE---IFVCHHCGVSFKMRYCIKDHLRRRH 189
+ FS+ + H + +H+ FVC G MR+ K H+R +H
Sbjct: 313 SSTFSKASNLQKHMKAVHDDIRPFVCGFPGCG--MRFAYK-HVRNKH 356
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 87 SYICDICESNFPDKLRLKMHIASH-----FDVYECQYCRQICQGDSSKGRHVREH-GAVL 140
++ C C + F LK H+ SH F Y C + RH+ H G +
Sbjct: 65 NHTCQECGAEFKKPAHLKQHMQSHSLERSFTCY-VDDCAASYRRKDHLNRHLLTHKGKLF 123
Query: 141 QCLK--CDAKFSERRDFYAHHRRLH 163
+C K C ++FS + + H ++ H
Sbjct: 124 KCPKENCKSEFSVQGNVGRHVKKYH 148
Score = 28.3 bits (60), Expect = 6.9
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 13/107 (12%)
Query: 114 YECQYCRQICQGDSSKGRHVREHGAV-LQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCG 172
Y CQYC + +H++ H + L+ + D + ++H C CG
Sbjct: 20 YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNH-------TCQECG 72
Query: 173 VSFKMRYCIKDHLRRRHAPKKCTC----CNKTFARYKSLWMHTRLSH 215
FK +K H++ + TC C ++ R L H L+H
Sbjct: 73 AEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHL-LTH 118
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 32.3 bits (70), Expect = 0.42
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 93 CESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHG-----AVLQC--LKC 145
C F ++ LK HI S C+ C + K RH+R H ++C C
Sbjct: 166 CMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKNIK-RHLRTHDEDSSPGEIKCEVEGC 224
Query: 146 DAKFSERRDFYAHHRRLHE---IFVCHHCGVSFKMRYCIKDHLRRRH 189
+ FS+ + H + +H+ FVC G MR+ K H+R +H
Sbjct: 225 SSTFSKASNLQKHMKAVHDDIRPFVCGFPGCG--MRFAYK-HVRNKH 268
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 134 REHG-AVLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLR 186
R+HG C C + + D+ H + + +VC CG FK + +KDH++
Sbjct: 222 RKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCV-CGSDFKHKRSLKDHVK 274
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 31.9 bits (69), Expect = 0.56
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 211 TRLSHASAVPAYCVECDKHFTDVYKYRRHLN--GPKHKPGKKRRSWSIGIYCFTEMGRSV 268
TR+SH PA V C+ D+ H G + KP K ++++S + E +
Sbjct: 515 TRVSHDVDTPALSVGCNSKEEDLDVPGVHTTAFGGRRKPSKPKKNFSFAVDTIEEPDSNK 574
Query: 269 VPLAETIPPVNRGNNYSELLKEGGSVEAQAED 300
+ I + NN S+ G + AE+
Sbjct: 575 EDMQGFIDEQDGANNESDFTANDGLNSSAAEE 606
>At5g02330.1 68418.m00156 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 656
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 53 EICLECEAMLKRIDDFYNRVQRAIGLLLSGTKRLSYICDIC---ESNFPDKLRLKMHIAS 109
++ L + +K I F + +R LL K+ S +CD+C + FP + L+ +
Sbjct: 216 KLSLHPDCAMKPISIFIDHPKRHPHLLTFFPKQASLLCDVCSLIKEAFPTYVCLRCIFVA 275
Query: 110 HFDVYECQYCRQICQ 124
H D Y +IC+
Sbjct: 276 HRDCIYFPYVIKICR 290
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 31.1 bits (67), Expect = 0.98
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)
Query: 116 CQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSF 175
C+ C + Q D + H R H + + +K +R + + V HH +
Sbjct: 68 CEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTC----VHHHSSRAL 123
Query: 176 KMRYCIKDHLRRRHAPKKCTC--CNKTFARYKSLWMHTR 212
IK H R+H KK TC C K +A H++
Sbjct: 124 GDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSK 162
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 14 LLCRTCLNGEQKLKPLGQLSAIFRKLFSDCKGLFDL-EMIEICLECEAMLKRID 66
+L R L +LK L QL + D G DL EM+E+CLE + L+ +D
Sbjct: 632 ILTRLLLRNCTRLKRLPQLRPLTNLQILDACGATDLVEMLEVCLEEKKELRILD 685
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 31.1 bits (67), Expect = 0.98
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 114 YECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGV 173
+ C+ C + Q D + H R H + + + K +++ Y HH
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETN---CAHHHPSR 138
Query: 174 SFKMRYCIKDHLRRRHAPKKCTC--CNKTFARYKSLWMHTRL 213
+ IK H R+H KK C C+K +A HT++
Sbjct: 139 ALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKI 180
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 87 SYICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCD 146
SY C++C P L H ASH + + G+ + + + G + +C C
Sbjct: 749 SYQCNVCGRELPSYQALGGHKASH----RTKPPVENATGEKMRPKKLAPSGKIHKCSICH 804
Query: 147 AKFSERRDFYAHHRRLH 163
+FS + H+RLH
Sbjct: 805 REFSTGQSL-GGHKRLH 820
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 112 DVYECQYCRQICQGDSSKGRHVREH---GAVLQCLKCDAKFSERRDFYAHHRRLHEIFVC 168
D+++C C ++ + G H H A L+ DA R + ++H+ +C
Sbjct: 191 DLFKCSICEKVFTSYQALGGHKASHSIKAAQLENAGADAGEKTRSKMLSPSGKIHKCDIC 250
Query: 169 HHCGVSFKMRYCIKDHLRRRH 189
H V F + H RR +
Sbjct: 251 H---VLFPTGQALGGHKRRHY 268
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 90 CDICESNFPDKLRLKMHIASHFDVYECQYCRQICQ-GDSSKGRHVREHGAVLQCLKCDAK 148
C ICE F L H ASH + Q G+ ++ + + G + +C C
Sbjct: 195 CSICEKVFTSYQALGGHKASH-SIKAAQLENAGADAGEKTRSKMLSPSGKIHKCDICHVL 253
Query: 149 FSERRDFYAHHRRLHE 164
F + H RR +E
Sbjct: 254 FPTGQALGGHKRRHYE 269
>At1g02770.1 68414.m00231 expressed protein contains Pfam profile
PF04776: Protein of unknown function (DUF626)
Length = 316
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 53 EICLECEAMLKRIDDFYNRVQRAIGLLLSGTKRLSYICDICESNFPDKLRLKMHIASHFD 112
E+CLE E R+D+ I GT + Y C + S PD + +K++ ++
Sbjct: 16 ELCLEVEDYWARVDESDGFDVEGIQAPPGGTPLIHYDCHLPNSRHPDPVLVKLYASAGLH 75
Query: 113 VY 114
Y
Sbjct: 76 RY 77
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 83 TKRLSYICDICESNFPDKLRLKMHIASH 110
+K L Y C++CE FP L H ASH
Sbjct: 101 SKNLPYKCNVCEKAFPSYQALGGHKASH 128
>At5g36860.1 68418.m04416 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1204
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 211 TRLSHASAVPAYCVECDKHFTDVYKYRRHLN--GPKHKPGKKRRSWSIGIYCFTEMGRSV 268
TR+SH PA V C+ D+ H G + KP K +++ S + E +
Sbjct: 548 TRVSHDVDTPALSVGCNSKEEDLDVPGVHTTAFGGRRKPSKPKKNVSFAVDTIEEPDSNK 607
Query: 269 VPLAETIPPVNRGNNYSELLKEGGSVEAQAED 300
+ I + NN S+ G + AE+
Sbjct: 608 EDMQGFIDEQDGANNESDFTANDGLNSSAAEE 639
>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
At3g24390, At4g05280, At1g25886, At4g03300; contains
Pfam profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1468
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 211 TRLSHASAVPAYCVECDKHFTDVYKYRRHLN--GPKHKPGKKRRSWSIGIYCFTEMGRSV 268
TR+SH PA V C+ D+ H G + KP K +++ S + E +
Sbjct: 546 TRVSHDVDTPALSVGCNSKEEDLDVPGIHTTAFGGRRKPSKPKKNVSFAVDTIEEPDSNK 605
Query: 269 VPLAETIPPVNRGNNYSELLKEGGSVEAQAED 300
+ I + NN S+ G + AE+
Sbjct: 606 EDMQGFIDEQDGANNESDFTANDGLNSSAAEE 637
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 139 VLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSFKMRYCIKDHLRRRHAPK-KCTCC 197
V Q KC + R H+ RL E C + D + P KC C
Sbjct: 21 VEQWTKCKKRSKRSRSDLHHNHRLTEEEYLAFCLMLLARDGGDLDSVTVAEKPSYKCGVC 80
Query: 198 NKTFARYKSLWMHTRLSHAS 217
KTF+ Y++L H + SH S
Sbjct: 81 YKTFSSYQALGGH-KASHRS 99
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 11/67 (16%)
Query: 134 REHGAVLQCLKCDAKFSERRDFYAHHRRLHE-----------IFVCHHCGVSFKMRYCIK 182
+++G V C +C AKFS H + HE + VC C F+ +
Sbjct: 207 KDNGIVEVCPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLV 266
Query: 183 DHLRRRH 189
+H+ R H
Sbjct: 267 NHIERDH 273
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDVYECQYCRQICQGDSSKGRHVREHGAVLQCLKCDA 147
Y C C+ FP L H ASH + + D K + + +++
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNL---DLKKNTYANDAVSLVHTTTTVF 209
Query: 148 KFSERRDFYAHHR-RLHEIFVCHHCGVSFKMRYCIKDHLRR 187
K + R + + +++ C CG F + H+RR
Sbjct: 210 KNNNSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRR 250
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 189 HAPKKCTCCNKTFARYKSLWMHTRLSH 215
H KCT C K+F+ Y++L H + SH
Sbjct: 94 HRDYKCTVCGKSFSSYQALGGH-KTSH 119
>At3g19680.1 68416.m02493 expressed protein
Length = 491
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 240 LNGPKHKPGKKRRSWSIGIYCFTEMGRSVVPLAETIPP 277
+N K +P K+R+ WSI ++ ++ S V +A + P
Sbjct: 251 MNSEKEQPSKERKGWSITVH---DLSGSPVAMASMVTP 285
>At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; weak similarity to Zinc finger protein T86
(Swiss-Prot:O00488) [Homo sapiens]
Length = 198
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 222 YCVECDKHFTDVYKYRRHLNGPKHK 246
YC+ CD++F++V H KHK
Sbjct: 59 YCLHCDRYFSNVSVRDDHFKTKKHK 83
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 232 DVYKYRRHLNG-PKHKPGKKRRSWSIGIYCFTEMGRSVVPLAETIPPVN---RGNNYSEL 287
++ KY + G K KPG +W + + TE R V AE N R E+
Sbjct: 1061 ELIKYFESIEGVQKIKPGHNPAAWMLDVTASTEEHRLGVDFAEIYRNSNLCQRNKELIEV 1120
Query: 288 LKEGGSVEAQAEDPRR 303
L + ++ + E P R
Sbjct: 1121 LSKPSNIAKEIEFPTR 1136
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 211 TRLSHASAVPAYCVECDKHFTDVYKYRRHLN--GPKHKPGKKRRSWSIGIYCFTEMGRSV 268
TR+SH PA V C+ D+ H G + KP K +++ S + E +
Sbjct: 548 TRVSHDVDTPALFVGCNSKEEDLDVPGVHTTAFGGRRKPSKLKKNVSFAVDTTEEPDSNK 607
Query: 269 VPLAETIPPVNRGNNYSELLKEGGSVEAQAED 300
+ I + NN S+ G + AE+
Sbjct: 608 EDMQGFIDEQDGANNESDFTANDGLNSSAAEE 639
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Query: 211 TRLSHASAVPAYCVECDKHFTDVYKYRRHLN--GPKHKPGKKRRSWSIGIYCFTEMGRSV 268
TR+SH PA V C+ D+ H G + KP K +++ S + E +
Sbjct: 548 TRVSHDVDTPALFVGCNSKEEDLDVPGVHTTAFGGRRKPSKLKKNVSFAVDTTEEPDSNK 607
Query: 269 VPLAETIPPVNRGNNYSELLKEGGSVEAQAED 300
+ I + NN S+ G + AE+
Sbjct: 608 EDMQGFIDEQDGANNESDFTANDGLNSSAAEE 639
>At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 486
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDV-YEC 116
Y CD C+ + K+R+K + FD+ EC
Sbjct: 45 YNCDYCQKDITGKIRIKCAVCPDFDLCIEC 74
>At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 483
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDV-YEC 116
Y CD C+ + K+R+K + FD+ EC
Sbjct: 45 YNCDYCQKDITGKIRIKCAVCPDFDLCIEC 74
>At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 487
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 88 YICDICESNFPDKLRLKMHIASHFDV-YEC 116
Y CD C+ + K+R+K + FD+ EC
Sbjct: 45 YNCDYCQKDITGKIRIKCAVCPDFDLCIEC 74
>At1g67030.1 68414.m07622 zinc finger (C2H2 type) family protein
(ZFP6) identical to zinc finger protein, ZFP6
gi|790683|gb|AAA87302; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 197
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 114 YECQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYAHH 159
YECQYC + + G H H Q LK A+ R HH
Sbjct: 41 YECQYCCREFANSQALGGHQNAHKKERQLLK-RAQMLATRGLPRHH 85
>At1g09400.1 68414.m01051 12-oxophytodienoate reductase, putative
similar to OPR1 [GI:3882355] and OPR2 [GI:3882356]
Length = 324
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 85 RLSYICDICESNFPDKLRLKMHIASHFDVYECQYCRQI 122
RLS D ES D RL +++A + +E YC I
Sbjct: 212 RLSPFADYMESGDTDPKRLGLYMAKSLNRFEILYCHMI 249
>At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /
protein kinase, putative nearly identical to IRE
(incomplete root hair elongation) [Arabidopsis thaliana]
gi|6729346|dbj|BAA89783
Length = 1168
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 53 EICLECEAMLKRIDDFYNRVQRAIGLLLSGTKRLSYICDIC--------ESNFPDKLRLK 104
E L+CE +++++DD R + +G L RL +I C ES + ++ L
Sbjct: 286 EFWLKCEGIVQKLDD--KRQELPMGGLKQAHNRLLFILTRCNRLVQFRKESGYVEEHILG 343
Query: 105 MHIASHFDVYECQYCRQICQGDSSKGRHVRE 135
MH S VY Q Q D + + +++
Sbjct: 344 MHQLSDLGVYPEQMVEISRQQDLLREKEIQK 374
>At4g09310.1 68417.m01539 SPla/RYanodine receptor (SPRY)
domain-containing protein low similarity to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 397
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 22 GEQKLKPLGQLSAIFRKLFSDCKGLFDLEMIE 53
G Q K S++ + LF DC LF+ E IE
Sbjct: 311 GNQDFKDFRD-SSLLKNLFDDCSALFECETIE 341
>At4g09200.1 68417.m01522 SPla/RYanodine receptor (SPRY)
domain-containing protein low similarity to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 397
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 22 GEQKLKPLGQLSAIFRKLFSDCKGLFDLEMIE 53
G Q K S++ + LF DC LF+ E IE
Sbjct: 311 GNQDFKDFRD-SSLLKNLFDDCSALFECETIE 341
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 266 RSVVPLAETIPPVNRGNNYSELLKEGGSVEA-QAEDPRR 303
+S+ P + I P+ GNN+S+ + G+ +A + RR
Sbjct: 469 QSIRPASSKIQPIRSGNNHSDSISSNGTENGNEANEGRR 507
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 27.9 bits (59), Expect = 9.1
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
Query: 116 CQYCRQICQGDSSKGRHVREHGAVLQCLKCDAKFSERRDFYAHHRRLHEIFVCHHCGVSF 175
C+ C + Q D + H R H + + K R+ Y V HH +
Sbjct: 94 CEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPE---PGCVHHHPSRAL 150
Query: 176 KMRYCIKDHLRRRHAPKKCTC--CNKTFARYKSLWMHTRLSHASAVPAYCVECD 227
IK H R+H KK C C+K +A +S W +HA +CD
Sbjct: 151 GDLTGIKKHFFRKHGEKKWKCEKCSKKYA-VQSDWK----AHAKTCGTKEYKCD 199
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.326 0.139 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,855,309
Number of Sequences: 28952
Number of extensions: 340349
Number of successful extensions: 1326
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1249
Number of HSP's gapped (non-prelim): 97
length of query: 309
length of database: 12,070,560
effective HSP length: 81
effective length of query: 228
effective length of database: 9,725,448
effective search space: 2217402144
effective search space used: 2217402144
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)
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