GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001662-TA|BGIBMGA001662-PA|undefined
         (257 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051770-1|AAK93194.1| 1240|Drosophila melanogaster LD29802p pro...    29   6.3  
AF487677-1|AAM18044.1| 1240|Drosophila melanogaster vanaso protein.    29   6.3  
AF487674-1|AAM18043.1| 1240|Drosophila melanogaster vanaso protein.    29   6.3  
AE014296-358|AAF47570.1| 1240|Drosophila melanogaster CG32315-PA...    29   6.3  

>AY051770-1|AAK93194.1| 1240|Drosophila melanogaster LD29802p
           protein.
          Length = 1240

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 70  RELIYKVIKFFESEKQNRGYAFPVE 94
           R+L YK +K +E    NRG+ FP E
Sbjct: 466 RDLFYKALKRWEVSHLNRGFNFPSE 490


>AF487677-1|AAM18044.1| 1240|Drosophila melanogaster vanaso protein.
          Length = 1240

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 70  RELIYKVIKFFESEKQNRGYAFPVE 94
           R+L YK +K +E    NRG+ FP E
Sbjct: 466 RDLFYKALKRWEVSHLNRGFNFPSE 490


>AF487674-1|AAM18043.1| 1240|Drosophila melanogaster vanaso protein.
          Length = 1240

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 70  RELIYKVIKFFESEKQNRGYAFPVE 94
           R+L YK +K +E    NRG+ FP E
Sbjct: 466 RDLFYKALKRWEVSHLNRGFNFPSE 490


>AE014296-358|AAF47570.1| 1240|Drosophila melanogaster CG32315-PA
           protein.
          Length = 1240

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 70  RELIYKVIKFFESEKQNRGYAFPVE 94
           R+L YK +K +E    NRG+ FP E
Sbjct: 466 RDLFYKALKRWEVSHLNRGFNFPSE 490


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,257,623
Number of Sequences: 52641
Number of extensions: 234734
Number of successful extensions: 445
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 441
Number of HSP's gapped (non-prelim): 4
length of query: 257
length of database: 24,830,863
effective HSP length: 83
effective length of query: 174
effective length of database: 20,461,660
effective search space: 3560328840
effective search space used: 3560328840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)