Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001661-TA|BGIBMGA001661-PA|IPR007087|Zinc finger,
C2H2-type
(164 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 97 1e-22
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 64 9e-13
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 54 9e-10
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 40 1e-05
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 40 1e-05
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 38 5e-05
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 38 7e-05
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 36 2e-04
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 2.7
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 3.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 4.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.2
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 96.7 bits (230), Expect = 1e-22
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 12 GQESY-CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLG 70
G++ Y C C K F K +L+VH R H++ + Y+CD C + + RH+ H G
Sbjct: 116 GEKPYQCEYCSKSFSVKENLSVHRRIHTKE--RPYKCDVCERAFEHSGKLHRHMR-IHTG 172
Query: 71 GATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHT 130
HKC C K F + HMR H +K +C+ C FT SK LK H RTHT
Sbjct: 173 -ERPHKCTVCSKTFIQSGQLVIHMRT-HTGEK---PYVCKACGKGFTCSKQLKVHTRTHT 227
Query: 131 GERPYVCPVCEATFAHSGTLYNHKRLMHGRALEK 164
GE+PY C +C +F ++ L H+ +G + K
Sbjct: 228 GEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYK 261
Score = 88.2 bits (209), Expect = 4e-20
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 17 CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHK 76
C+ C K F K HLR H + Y C+ CG + + RH + H G ++
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRT-HT-GEKPYQ 121
Query: 77 CPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYV 136
C C K F+ + H R+ +K+ P C++C +F S L H+R HTGERP+
Sbjct: 122 CEYCSKSFSVKENLSVHRRI--HTKERPYK--CDVCERAFEHSGKLHRHMRIHTGERPHK 177
Query: 137 CPVCEATFAHSGTLYNHKRLMHG 159
C VC TF SG L H R G
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTG 200
Score = 85.0 bits (201), Expect = 3e-19
Identities = 51/156 (32%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 4 LSAHSGDGGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRH 63
L +H +G C CGK F L H R H+ K Y+C+ C + + ++ H
Sbjct: 81 LRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGE--KPYQCEYCSKSFSVKENLSVH 138
Query: 64 ITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLK 123
H +KC C++ F + RHMR+ H + R C +C+ +F S L
Sbjct: 139 -RRIHT-KERPYKCDVCERAFEHSGKLHRHMRI-HTGE---RPHKCTVCSKTFIQSGQLV 192
Query: 124 AHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHG 159
H+RTHTGE+PYVC C F S L H R G
Sbjct: 193 IHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTG 228
Score = 81.0 bits (191), Expect = 5e-18
Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 43 KRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKK 102
K Y+C C + + H+ S G ++C C K FA RH R H +K
Sbjct: 60 KTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRT-HTGEK 118
Query: 103 MPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHGRAL 162
+ CE C+ SF+ + L H R HT ERPY C VCE F HSG L+ H R+ G
Sbjct: 119 PYQ---CEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERP 175
Query: 163 EK 164
K
Sbjct: 176 HK 177
Score = 60.5 bits (140), Expect = 8e-12
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 1 MHR-LSAHSGDGGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRS 59
+HR + H+G+ + C C K F L +H+R H+ K Y C CG + +
Sbjct: 163 LHRHMRIHTGERPHK--CTVCSKTFIQSGQLVIHMRTHTGE--KPYVCKACGKGFTCSKQ 218
Query: 60 IVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSS 119
+ H T H G + C C K F H + H ++ H +K+ + C +C +F S
Sbjct: 219 LKVH-TRTHTG-EKPYTCDICGKSFGYNHVLKLH-QVAHYGEKVYK---CTLCHETFGSK 272
Query: 120 KMLKAHIRTHT 130
K ++ HI+TH+
Sbjct: 273 KTMELHIKTHS 283
Score = 26.2 bits (55), Expect = 0.16
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 108 ICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHGR 160
+C S FTS T+ E+ Y C +C+ F +H R HG+
Sbjct: 35 VCSPDLSVFTSPACGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLR-SHGK 86
Score = 24.2 bits (50), Expect = 0.66
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 2 HRLSAHS-GDGGQESY-CVDCGKFFCNKYSLAVHLREHSE 39
H L H G++ Y C C + F +K ++ +H++ HS+
Sbjct: 245 HVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSD 284
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 63.7 bits (148), Expect = 9e-13
Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 71 GATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHT 130
G +CP C K F HH + HMRL H +K C C F L+ H+R HT
Sbjct: 6 GEKPFECPECHKRFTRDHHLKTHMRL-HTGEKPYH---CSHCDRQFVQVANLRRHLRVHT 61
Query: 131 GERPYVCPVCEA 142
GERPY C +C A
Sbjct: 62 GERPYACELCAA 73
Score = 48.8 bits (111), Expect = 3e-08
Identities = 21/51 (41%), Positives = 25/51 (49%)
Query: 109 CEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHG 159
C C FT LK H+R HTGE+PY C C+ F L H R+ G
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTG 62
Score = 39.1 bits (87), Expect = 2e-05
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 127 RTHTGERPYVCPVCEATFAHSGTLYNHKRLMHG 159
RTHTGE+P+ CP C F L H RL G
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTG 34
Score = 33.9 bits (74), Expect = 8e-04
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 7 HSGDGGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITS 66
H+G+ E C +C K F + L H+R H+ K Y C C ++ ++ RH+
Sbjct: 4 HTGEKPFE--CPECHKRFTRDHHLKTHMRLHTGE--KPYHCSHCDRQFVQVANLRRHL-R 58
Query: 67 AHLGGATEHKCPRC 80
H G + C C
Sbjct: 59 VHT-GERPYACELC 71
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 53.6 bits (123), Expect = 9e-10
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 63 HITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKML 122
H +A C C+K++ + + H+R + +P C +C +F+ +L
Sbjct: 5 HCAAAEGQAKKSFSCKYCEKVYVSLGALKMHIR----THTLPCK--CHLCGKAFSRPWLL 58
Query: 123 KAHIRTHTGERPYVCPVCEATFA 145
+ HIRTHTGE+P+ C C FA
Sbjct: 59 QGHIRTHTGEKPFSCQHCNRAFA 81
Score = 29.1 bits (62), Expect = 0.023
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 5 SAHSGDGGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHI 64
+A G + C C K + + +L +H+R H+ +C CG K ++R +++
Sbjct: 7 AAAEGQAKKSFSCKYCEKVYVSLGALKMHIRTHT----LPCKCHLCG-KAFSRPWLLQGH 61
Query: 65 TSAHLGGATEHKCPRCDKIFA 85
H G C C++ FA
Sbjct: 62 IRTHT-GEKPFSCQHCNRAFA 81
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 39.9 bits (89), Expect = 1e-05
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 17 CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAH 68
C CGK C+K SL H+ + + Y C C Y +R S++ HI + H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 39.1 bits (87), Expect = 2e-05
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 43 KRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESK 101
K + C CG ++ S+ RH+ H E++C C++++ + + H+ H+S+
Sbjct: 4 KLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSR 62
Score = 34.3 bits (75), Expect = 6e-04
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 77 CPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERP 134
C C K+ + +RH+ KH ++ + C IC + S L HI T+ RP
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQ--EEYRCVICERVYCSRNSLMTHIYTYHKSRP 63
Score = 33.1 bits (72), Expect = 0.001
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 109 CEICASSFTSSKMLKAHIRTHTGERP--YVCPVCEATFAHSGTLYNHKRLMH 158
C++C S LK H+ ER Y C +CE + +L H H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 25.8 bits (54), Expect = 0.22
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 13 QESY-CVDCGKFFCNKYSLAVHL 34
QE Y CV C + +C++ SL H+
Sbjct: 33 QEEYRCVICERVYCSRNSLMTHI 55
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 39.9 bits (89), Expect = 1e-05
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 42 GKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESK 101
G Y CD CG T+ ++ RH H C C K+F T + H + H +
Sbjct: 369 GVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRRQ 428
Query: 102 K 102
K
Sbjct: 429 K 429
Score = 32.7 bits (71), Expect = 0.002
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 109 CEICASSFTSSKMLKAHIRTHTGE--RPYVCPVCEATFAHSGTLYNHKRLMHGR 160
C++C + ++ LK H + VC +C F +L NHK + H R
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRR 427
Score = 25.0 bits (52), Expect = 0.38
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 135 YVCPVCEATFAHSGTLYNHKRLMHGRAL 162
Y C VC T + TL HK H + L
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPL 399
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 37.9 bits (84), Expect = 5e-05
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 17 CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGA 72
C C + F YSL H ++ E Y C+ C +Y T+ S+ H + H G +
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGSS 63
Score = 31.9 bits (69), Expect = 0.003
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 76 KCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAH 125
+CP C + F+ + +RH + KHE +CE C + + L H
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTL--YVCEFCNRRYRTKNSLTTH 54
Score = 31.5 bits (68), Expect = 0.004
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 109 CEICASSFTSSKMLKAHIRT--HTGERPYVCPVCEATFAHSGTLYNHKRLMH 158
C C +F+ LK H + + YVC C + +L HK L H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 30.3 bits (65), Expect = 0.010
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 41 VGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKH 98
+ + EC C + S+ RH H T + C C++ + T + H L+H
Sbjct: 2 INEPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 37.5 bits (83), Expect = 7e-05
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 88 HHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHS 147
HH H+R SK CE C+ S + ML +H+++H+ Y C C T+A
Sbjct: 2 HHLEYHLRNHFGSKPFK----CEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC--TYA-- 53
Query: 148 GTLYNHKRLMHGR 160
T Y H +H R
Sbjct: 54 -TKYCHSLKLHLR 65
Score = 25.8 bits (54), Expect = 0.22
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 2 HRLSAHSGD--GGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDC 50
H L H + G + C C NK L HL+ HS +Y C +C
Sbjct: 2 HHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVY--QYRCANC 50
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 35.9 bits (79), Expect = 2e-04
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 109 CEICASSFTSSKMLKAHIRT-HTG-ERPYVCPVCEATFAHSGTLYNHKRLMH 158
CE C TS L+ HI+ HT + +C +C+ ++ +L NHK + H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
Score = 35.1 bits (77), Expect = 4e-04
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 74 EHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAH 125
E +C C+KI + RRH++ H + ++ IC IC ++S L+ H
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVH--TRPSKEPICNICKRVYSSLNSLRNH 51
Score = 31.5 bits (68), Expect = 0.004
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 45 YECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKH 98
+ C+ C + + RHI + H + E C C +++++ + R H + H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/55 (23%), Positives = 20/55 (36%)
Query: 14 ESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAH 68
E C C K + L H++ K C+ C Y + S+ H + H
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYH 56
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.2 bits (45), Expect = 2.7
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 68 HLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHI- 126
H G E+ CP D + RR K K +P + C C ++ + H+
Sbjct: 6 HNGRDFEY-CPDLDNVTMPETTPRR----KKNKKPLPTE--CVFCRNNGEEEAYYRKHLL 58
Query: 127 RTHTGE------RPYVCPVCEA 142
+ G R Y CP+C A
Sbjct: 59 KDADGRVSCPVLRAYTCPICGA 80
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 36 EHSEHVGKRYECDDCG 51
E E+V Y C DCG
Sbjct: 474 EEYEYVHDEYTCMDCG 489
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 36 EHSEHVGKRYECDDCG 51
E E+V Y C DCG
Sbjct: 564 EEYEYVYDEYTCMDCG 579
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 64 ITSAHLGGATEHKC 77
+ S HLGG E +C
Sbjct: 339 LLSVHLGGNAEFRC 352
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 64 ITSAHLGGATEHKC 77
+ S HLGG E +C
Sbjct: 339 LLSVHLGGNAEFRC 352
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 8.2
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 33 HLREHSEHVGKRYECDDCGLKYYT 56
HLR+ H CD +K+ T
Sbjct: 312 HLRDPDHHSTDIQNCDSVKIKFET 335
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.325 0.135 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,006
Number of Sequences: 429
Number of extensions: 2124
Number of successful extensions: 62
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 41
length of query: 164
length of database: 140,377
effective HSP length: 53
effective length of query: 111
effective length of database: 117,640
effective search space: 13058040
effective search space used: 13058040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 41 (20.6 bits)
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