Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001661-TA|BGIBMGA001661-PA|IPR007087|Zinc finger,
C2H2-type
(164 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 53 1e-07
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 45 3e-05
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 45 3e-05
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 44 7e-05
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 41 5e-04
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 37 0.006
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 37 0.006
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 36 0.013
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 36 0.018
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 34 0.054
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 33 0.072
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.072
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 33 0.072
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 33 0.072
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 33 0.072
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 33 0.13
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 33 0.13
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 33 0.13
At5g20220.1 68418.m02407 zinc knuckle (CCHC-type) family protein... 32 0.17
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 32 0.22
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 32 0.22
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 32 0.22
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 31 0.29
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 31 0.29
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 31 0.38
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 31 0.38
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 31 0.51
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 30 0.67
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 30 0.67
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 30 0.67
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 30 0.67
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 30 0.67
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 30 0.89
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 30 0.89
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 1.2
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 29 1.2
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 29 1.2
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 29 1.2
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 1.5
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 29 1.5
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 29 1.5
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 1.5
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 29 1.5
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 29 1.5
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 29 2.0
At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein ... 29 2.0
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 29 2.0
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 29 2.0
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 29 2.0
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 2.7
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 28 2.7
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 28 2.7
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 28 2.7
At4g33940.1 68417.m04816 zinc finger (C3HC4-type RING finger) fa... 28 3.6
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 28 3.6
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 28 3.6
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 28 3.6
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 28 3.6
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 28 3.6
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 28 3.6
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 27 4.7
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 4.7
At4g14200.1 68417.m02191 expressed protein 27 4.7
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 27 4.7
At3g26550.1 68416.m03314 DC1 domain-containing protein contains ... 27 4.7
At3g12270.1 68416.m01532 protein arginine N-methyltransferase fa... 27 4.7
At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger) fa... 27 4.7
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 27 4.7
At5g16470.1 68418.m01925 zinc finger (C2H2 type) family protein ... 27 6.2
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 27 6.2
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 27 6.2
At2g01620.1 68415.m00088 expressed protein 27 6.2
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 27 6.2
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa... 27 8.3
At4g11560.1 68417.m01853 bromo-adjacent homology (BAH) domain-co... 27 8.3
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 27 8.3
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 27 8.3
At3g02790.1 68416.m00271 zinc finger (C2H2 type) family protein ... 27 8.3
At2g04680.1 68415.m00478 DC1 domain-containing protein contains ... 27 8.3
At1g25570.1 68414.m03174 leucine-rich repeat protein-related co... 27 8.3
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 27 8.3
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 48 DDCGLKYYTRRSIVRHITSAHLGGATEHKCPR--CDKIFATAHHKRRHMRLKHESKKMPR 105
D CG ++ ++ +H +H+ G ++ C + C K F + +RH L H + R
Sbjct: 84 DGCGKTFFDVSALRKH---SHIHGERQYVCDQEGCGKKFLDSSKLKRHY-LIHTGE---R 136
Query: 106 DKIC--EICASSFTSSKMLKAHIRTHTGERPYVCPV--CEATFAHSGTLYNHKRLMH 158
+ IC E C +F+ L++H++TH+ E ++CP C +AH L NH H
Sbjct: 137 NYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYH 193
Score = 35.9 bits (79), Expect = 0.013
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 7 HSGDGGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITS 66
H+G+ CGK F ++L H++ HS+ C +Y + H+ +
Sbjct: 132 HTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAA 191
Query: 67 AHL---GGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLK 123
H GG T P +K+ T + + S P E C ++ LK
Sbjct: 192 YHEKNGGGETPKYTPPAEKVLRTV---KTPATVCGPSSDRPYACPYEGCEKAYIHEYKLK 248
Query: 124 AHI-RTHTG 131
H+ R H G
Sbjct: 249 LHLKREHPG 257
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 44.8 bits (101), Expect = 3e-05
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 14 ESYCVD--CGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHI-TSAHLG 70
E++C + C K+F N+ L H+R +H+ C+ CG K + +++I RH+ T
Sbjct: 246 EAFCSEPGCMKYFTNEECLKSHIRSCHQHI----NCEICGSK-HLKKNIKRHLRTHDEDS 300
Query: 71 GATEHKC--PRCDKIFATAHHKRRHMRLKHESKKMPRDKICEI--CASSFTSSKMLKAHI 126
E KC C F+ A + ++HM+ H+ R +C C F + H
Sbjct: 301 SPGEIKCEVEGCSSTFSKASNLQKHMKAVHDD---IRPFVCGFPGCGMRFAYKHVRNKH- 356
Query: 127 RTHTGERPYVC 137
++G Y C
Sbjct: 357 -ENSGYHVYTC 366
Score = 44.0 bits (99), Expect = 5e-05
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 43 KRYECDDCGLKYYTRRSIVRHITSAHL----------------GGATEHKCPRCDKIFAT 86
+ Y C CG+ I +HI S H ++ H C C F
Sbjct: 18 RNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKK 77
Query: 87 AHHKRRHMRLKHESKKMPRDKICEI--CASSFTSSKMLKAHIRTHTGERPYVCPV--CEA 142
H ++HM +S + R C + CA+S+ L H+ TH G + + CP C++
Sbjct: 78 PAHLKQHM----QSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKS 132
Query: 143 TFAHSGTLYNHKRLMH 158
F+ G + H + H
Sbjct: 133 EFSVQGNVGRHVKKYH 148
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 17 CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHK 76
C +CG F L H++ HS DDC Y + + RH+ + H G K
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLT-HKGKL--FK 124
Query: 77 CPR--CDKIFATAHHKRRHMRLKHESKKMPRD 106
CP+ C F+ + RH++ H + +D
Sbjct: 125 CPKENCKSEFSVQGNVGRHVKKYHSNDNRDKD 156
Score = 31.9 bits (69), Expect = 0.22
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 36 EHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMR 95
E E + C +CG ++ + +H+ S L + C + H RH+
Sbjct: 57 EVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHL- 115
Query: 96 LKHESKKMPRDKICEICASSFTSSKMLKAHIRTH 129
L H+ K K E C S F+ + H++ +
Sbjct: 116 LTHKGKLFKCPK--ENCKSEFSVQGNVGRHVKKY 147
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 96 LKHESKKMPRDKICEICASSFTSSKMLKAHIRTH 129
+K +KK R+ +C+ C S + + ++ HI++H
Sbjct: 9 VKTSAKKDIRNYLCQYCGISRSKNYLITKHIQSH 42
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 44.8 bits (101), Expect = 3e-05
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 14 ESYCVD--CGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHI-TSAHLG 70
E++C + C K+F N+ L H+R +H+ C+ CG K + +++I RH+ T
Sbjct: 158 EAFCSEPGCMKYFTNEECLKSHIRSCHQHI----NCEICGSK-HLKKNIKRHLRTHDEDS 212
Query: 71 GATEHKC--PRCDKIFATAHHKRRHMRLKHESKKMPRDKICEI--CASSFTSSKMLKAHI 126
E KC C F+ A + ++HM+ H+ R +C C F + H
Sbjct: 213 SPGEIKCEVEGCSSTFSKASNLQKHMKAVHDD---IRPFVCGFPGCGMRFAYKHVRNKH- 268
Query: 127 RTHTGERPYVC 137
++G Y C
Sbjct: 269 -ENSGYHVYTC 278
Score = 30.7 bits (66), Expect = 0.51
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 112 CASSFTSSKMLKAHIRTHTGERPYVCPV--CEATFAHSGTLYNHKRLMH 158
CA+S+ L H+ TH G + + CP C++ F+ G + H + H
Sbjct: 13 CAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYH 60
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 43.6 bits (98), Expect = 7e-05
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 36 EHSEHVGKRYEC--DDCGLKYYTRRSIVRHITSAHLGGATEHKCP--RCDKIFATAHHKR 91
E+ E Y+C + C + + + + ++ H + CP C K F + +
Sbjct: 1228 ENEEEECAAYQCNMEGCTMSFSSEKQLMLH---------KRNICPIKGCGKNFFSHKYLV 1278
Query: 92 RHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVC--PVCEATFAHSGT 149
+H R+ + + P + C +F + HIR HTG RPYVC P C TF
Sbjct: 1279 QHQRVHSDDR--PLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSD 1336
Query: 150 LYNHKR 155
HKR
Sbjct: 1337 FSRHKR 1342
Score = 31.1 bits (67), Expect = 0.38
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 20 CGK-FFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKC- 77
CGK FF +KY L H R HS+ + C + + S HI H GA + C
Sbjct: 1267 CGKNFFSHKY-LVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHI-RVHT-GARPYVCA 1323
Query: 78 -PRCDKIFATAHHKRRHMRLKHESKK 102
P C + F RH R S K
Sbjct: 1324 EPDCGQTFRFVSDFSRHKRKTGHSVK 1349
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 80 CDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPV 139
C K F + H R+ H+ ++ P + + C+ +F H+R HTGERPY+C V
Sbjct: 1245 CGKKFRAHKYLVLHQRV-HKDER-PFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKV 1302
Query: 140 --CEATFAHSGTLYNHKR-LMH 158
C +F H+R MH
Sbjct: 1303 DGCGLSFRFVSDYSRHRRKTMH 1324
Score = 33.5 bits (73), Expect = 0.072
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 110 EICASSFTSSKMLKAHIRTHTGERPYVC--PVCEATFAHSGTLYNHKRLMHG 159
E C F + K L H R H ERP+ C C TF H RL G
Sbjct: 1243 EGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTG 1294
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 72 ATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSK---MLKAHIRT 128
+ H+C C K+F H HM++ + S PR +C SF S + + H+
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 129 HTGERPYV---CPVCEATFAHSGTLYNHKRLMH 158
+ + C +C F + L HK H
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 72 ATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSK---MLKAHIRT 128
+ H+C C K+F H HM++ + S PR +C SF S + + H+
Sbjct: 14 SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73
Query: 129 HTGERPYV---CPVCEATFAHSGTLYNHKRLMH 158
+ + C +C F + L HK H
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 35.9 bits (79), Expect = 0.013
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 10/147 (6%)
Query: 16 YCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEH 75
YC CGK F +L +H+R H G Y+ + + ++ + H +H
Sbjct: 218 YCQICGKGFKRDANLRMHMRAH----GDEYKTREALISPTSQDKKGGYSLKKHYYSCPQH 273
Query: 76 KCPRCDKIFATAHHKRRHMRLKHESKK--MPRDKICEICA-SSFTSSKMLKAHIRTHTGE 132
C R ++ + + K+ K+ P+ +C C+ F+ L+ H H G+
Sbjct: 274 GC-RWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTH-EKHCGD 331
Query: 133 RPYVCPVCEATFAHSGTLYNHKRLMHG 159
+VC C F+ L +H L G
Sbjct: 332 IKWVCS-CGTKFSRKDKLMSHVSLFLG 357
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 35.5 bits (78), Expect = 0.018
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 103 MPRDKICEICASSFTSSKMLKAHIRTHT 130
+ + KIC++C SF++ K L H+R HT
Sbjct: 5 LKKTKICQVCKKSFSNGKALGGHMRAHT 32
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 33.9 bits (74), Expect = 0.054
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 91 RRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTL 150
++H R KH + K ICE C+ + KAH++T G R + C C F+ +
Sbjct: 135 KKHFRRKHSNHKQ---WICERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESF 189
Query: 151 YNHK 154
H+
Sbjct: 190 IEHQ 193
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 33.5 bits (73), Expect = 0.072
Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 24/150 (16%)
Query: 17 CVDCGKFFCNKYSLAVHLREHS-EHVGKRYECDDCGLKYYT--RRSIVRHITSAHLGGAT 73
C CGK F +L +H R H+ K+ + + Y ++ V H +S LG T
Sbjct: 68 CEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLT 127
Query: 74 EHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGER 133
K +H KH KK CE CA + KAH +T G R
Sbjct: 128 GIK---------------KHFCRKHGEKKWT----CEKCAKRYAVQSDWKAHSKT-CGTR 167
Query: 134 PYVCPVCEATFAHSGTLYNHKRLMHGRALE 163
Y C C F+ + H+ A E
Sbjct: 168 EYRCD-CGTIFSRRDSFITHRAFCDALAEE 196
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKR-YECDDCGLKYYTRRSIVRH 63
G ++ C C K +Y++ + HS+ G R Y CD CG + R S + H
Sbjct: 138 GEKKWTCEKCAK----RYAVQSDWKAHSKTCGTREYRCD-CGTIFSRRDSFITH 186
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.5 bits (73), Expect = 0.072
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 16/99 (16%)
Query: 32 VHLREHSE-HVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHK 90
+ L +H+E H ++EC C ++ + +++ H S HK P+ H
Sbjct: 33 IGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRAS--------HKKPKLTVEQKDVKHL 84
Query: 91 RRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTH 129
+ H K C IC+ SF + + L H+R H
Sbjct: 85 SNDYKGNHFHK-------CSICSQSFGTGQALGGHMRRH 116
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 33.5 bits (73), Expect = 0.072
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 109 CEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHGRALEK 164
C IC S FTS + L H+R H + PV + + GR++E+
Sbjct: 190 CSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQ 245
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 33.5 bits (73), Expect = 0.072
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 91 RRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTL 150
++H R KH + K +CE C+ + KAH++T G R + C C F+ +
Sbjct: 132 KKHFRRKHSNHKQ---WVCERCSKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRVESF 186
Query: 151 YNHK 154
H+
Sbjct: 187 IEHQ 190
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 33.5 bits (73), Expect = 0.072
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 17 CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHK 76
C C K F + +L H H + + + + LK ++S TS+H H+
Sbjct: 162 CETCEKVFKSYQALGGHRASHKKKIAETDQLGSDELKKKKKKS-----TSSH------HE 210
Query: 77 CPRCDKIF----ATAHHKRRHMRLKHE 99
CP C K+F A HKR H +E
Sbjct: 211 CPICAKVFTSGQALGGHKRSHASANNE 237
Score = 30.3 bits (65), Expect = 0.67
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 17/71 (23%)
Query: 76 KCPRCDKIF----ATAHHKRRHMRLKHESKKMPRDKI-------------CEICASSFTS 118
+C C+K+F A H+ H + E+ ++ D++ C ICA FTS
Sbjct: 161 ECETCEKVFKSYQALGGHRASHKKKIAETDQLGSDELKKKKKKSTSSHHECPICAKVFTS 220
Query: 119 SKMLKAHIRTH 129
+ L H R+H
Sbjct: 221 GQALGGHKRSH 231
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 91 RRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTL 150
++H KH KK CE C+ + KAH +T G R Y C C F+ +
Sbjct: 147 KKHYSRKHGEKKWK----CEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTLFSRKDSF 200
Query: 151 YNHK 154
H+
Sbjct: 201 ITHR 204
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKR-YECDDCGLKYYTRRSIVRH 63
G ++ C C K KY++ + H++ G R Y+CD CG + + S + H
Sbjct: 155 GEKKWKCEKCSK----KYAVQSDWKAHAKTCGTREYKCD-CGTLFSRKDSFITH 203
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 91 RRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTL 150
++H R KH K +CE C+ + KAH++T G R + C C F+ +
Sbjct: 105 KKHFRRKHSVHKQ---WVCERCSKGYAVQSDYKAHLKT-CGSRGHSCD-CGRVFSRVESF 159
Query: 151 YNHK 154
H+
Sbjct: 160 IEHQ 163
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 32.7 bits (71), Expect = 0.13
Identities = 40/150 (26%), Positives = 54/150 (36%), Gaps = 24/150 (16%)
Query: 17 CVDCGKFFCNKYSLAVHLREHS-EHVGKRYECDDCGLKYYT--RRSIVRHITSAHLGGAT 73
C CGK F +L +H R H+ K+ + + Y +S V H + LG T
Sbjct: 72 CEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALGDLT 131
Query: 74 EHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGER 133
K +H KH KK CE CA + KAH +T G R
Sbjct: 132 GIK---------------KHFCRKHGEKKWK----CEKCAKRYAVQSDWKAHSKT-CGTR 171
Query: 134 PYVCPVCEATFAHSGTLYNHKRLMHGRALE 163
Y C C F+ + H+ A E
Sbjct: 172 EYRCD-CGTIFSRRDSFITHRAFCDALAEE 200
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVGKR-YECDDCGLKYYTRRSIVRH 63
G ++ C C K +Y++ + HS+ G R Y CD CG + R S + H
Sbjct: 142 GEKKWKCEKCAK----RYAVQSDWKAHSKTCGTREYRCD-CGTIFSRRDSFITH 190
>At5g20220.1 68418.m02407 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 393
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 13 QESYCVDCGKFFCNKYSLAVHLREHSEHVG----KRYECDDCGLKYYTRRSIVRHITSAH 68
Q S + KF+C H R + +G +++ C CG K + RR+ + +
Sbjct: 254 QRSLSMKGTKFYCKNCGQEGHRRHYCPELGTNADRKFRCRGCGGKGHNRRTCPKSKSIVT 313
Query: 69 LGGATE-HKCPRC 80
G +T HKC C
Sbjct: 314 KGISTRYHKCGIC 326
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 31.9 bits (69), Expect = 0.22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 100 SKKMPRDKICEICASSFTSSKMLKAHIRTHTG 131
SKK + C IC + F+S + L H+R H G
Sbjct: 185 SKKPEKTHECSICKAEFSSGQALGGHMRRHRG 216
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 47 CDDCGLKYYTRRSIVRHITSAH-------LGGATEHKCPRCDKIFATAHHKRRHMRLKH 98
C CG K+ + S+V H+ H G T CPRC + F H+ H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNHIERDH 273
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 31.9 bits (69), Expect = 0.22
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)
Query: 10 DGGQESY-CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIV-RHITSA 67
+G + S+ C C K F + +L H+R H+ Y + R+ + +H
Sbjct: 3 EGKENSFLCKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQ 62
Query: 68 HLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLK 123
+G C C ++F + R HM E KKM D + S TSS ++
Sbjct: 63 QVG------CRECGRVFVSLKALRGHMACHGEVKKMLMDDNSQSDTESETSSAPMR 112
Score = 31.5 bits (68), Expect = 0.29
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 108 ICEICASSFTSSKMLKAHIRTHTGE 132
+C+ C +F S K L HIR HT E
Sbjct: 10 LCKYCYKTFPSGKALGGHIRIHTNE 34
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 31.5 bits (68), Expect = 0.29
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 75 HKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERP 134
+KC C K+F + H R H+ ++ +K + + + + ++ +R
Sbjct: 173 YKCETCGKVFKSYQALGGH-RASHKKNRVSNNKTEQRSETEYDNVVVV--------AKRI 223
Query: 135 YVCPVCEATFAHSGTLYNHKRLMHG 159
+ CP+C FA L HKR HG
Sbjct: 224 HECPICLRVFASGQALGGHKR-SHG 247
Score = 27.9 bits (59), Expect = 3.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 109 CEICASSFTSSKMLKAHIRTH 129
C +C SF + K L H+R+H
Sbjct: 6 CRVCFKSFVNGKALGGHMRSH 26
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 31.5 bits (68), Expect = 0.29
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 75 HKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERP 134
+KC CDK F++ H K +K + TSS + + T +G +
Sbjct: 80 YKCSVCDKTFSSYQALGGH---KASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSG-KS 135
Query: 135 YVCPVCEATFAHSGTLYNHKR 155
+VC +C +F L HKR
Sbjct: 136 HVCTICNKSFPSGQALGGHKR 156
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 31.1 bits (67), Expect = 0.38
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 91 RRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTL 150
++H KH KK CE C+ + KAH +T G + Y C C F+ +
Sbjct: 157 KKHFFRKHGEKKWK----CEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTLFSRRDSF 210
Query: 151 YNHKRLMHGRALE 163
H+ A E
Sbjct: 211 ITHRAFCDALAEE 223
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K KY++ + H++ G K Y+CD CG + R S + H
Sbjct: 165 GEKKWKCEKCSK----KYAVQSDWKAHAKTCGTKEYKCD-CGTLFSRRDSFITH 213
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 31.1 bits (67), Expect = 0.38
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 105 RDKICEICASSFTSSKMLKAHIRTHTGE 132
R +C+ C+ F K L HIRTH E
Sbjct: 7 RKFVCKFCSKRFPCGKSLGGHIRTHMNE 34
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 27 KYSLAVHLREHSEHVGKRYECDDCG--LKYYTRRSIVRHITSAHLGGATEHKCPRCDKIF 84
KY + + EH + C D +K +++ +V+ A + H+CP C ++F
Sbjct: 350 KYEFTESVYDSGEHSLETDSCADTNRTIKIHSKSPMVKKANGAKKK-SKGHECPICFRVF 408
Query: 85 ----ATAHHKRRH 93
A HKR H
Sbjct: 409 KSGQALGGHKRSH 421
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 88 HHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTH-TGERPYVCPVCEATFAH 146
H K ++ + +KK + C IC F S + L H R+H G + + V + AH
Sbjct: 380 HSKSPMVKKANGAKKKSKGHECPICFRVFKSGQALGGHKRSHFIGNQEHRTLVIQHQVAH 439
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 30.7 bits (66), Expect = 0.51
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 17 CVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATE-H 75
C C K F + +L H H + G + T +I S GG+ + H
Sbjct: 91 CSVCDKAFSSYQALGGHKASHRKSFSLTQSAG--GDELSTSSAITTSGISGGGGGSVKSH 148
Query: 76 KCPRCDKIFATAHHKRRHMRLKHESK 101
C C K FAT H R +E K
Sbjct: 149 VCSICHKSFATGQALGGHKRCHYEGK 174
Score = 29.9 bits (64), Expect = 0.89
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 75 HKCPRCDKIF----ATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHT 130
+KC CDK F A HK H + ++ D++ TSS + + I
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELS-------TSSAITTSGISGGG 141
Query: 131 GE--RPYVCPVCEATFAHSGTLYNHKR 155
G + +VC +C +FA L HKR
Sbjct: 142 GGSVKSHVCSICHKSFATGQALGGHKR 168
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 30.3 bits (65), Expect = 0.67
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 70 GGATEHKCPRCDKIF----ATAHHKRRHMRLK----HESKKMPRDKIC--EICASSFTSS 119
G +H C C+K F A H+ H ++K H+++ + E + S+
Sbjct: 337 GAREKHVCVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAIITGLASA 396
Query: 120 KMLKAHIRT-HTGERPYVCPVCEATFAHSGTLYNHKR 155
+ + + H G+ +VC +C +F+ L HKR
Sbjct: 397 QGTNTSLSSSHNGD--HVCNICHKSFSTGQALGGHKR 431
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 106 DKICEICASSFTSSKMLKAHIRTH-TGERPYVCPVCEATFA 145
D +C IC SF++ + L H R H T V P T A
Sbjct: 410 DHVCNICHKSFSTGQALGGHKRCHWTAPVSTVAPTTVPTAA 450
Score = 27.1 bits (57), Expect = 6.2
Identities = 22/87 (25%), Positives = 30/87 (34%), Gaps = 11/87 (12%)
Query: 70 GGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHI-RT 128
G +H C C K F + H R+ + E S KM+ + R+
Sbjct: 74 GEEKKHICCECGKRFVSGKALGGHKRIH----------VLETRKFSMMRPKMVSGMVGRS 123
Query: 129 HTGERPYVCPVCEATFAHSGTLYNHKR 155
G+ C VC F LY H R
Sbjct: 124 ERGDLEVACCVCYKKFTSMKALYGHMR 150
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 30.3 bits (65), Expect = 0.67
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 102 KMPRDKI--CEICASSFTSSKMLKAHIRTHTG 131
K ++K+ C IC + FTS + L H+R H G
Sbjct: 222 KASKNKVHECGICGAEFTSGQALGGHMRRHRG 253
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 30.3 bits (65), Expect = 0.67
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 99 ESKKMPRDKICEICASSFTSSKMLKAHIRTHTGE 132
ES + R C IC F+S K H+R H+ E
Sbjct: 41 ESPQPQRKHFCVICEKQFSSGKAYGGHVRIHSIE 74
Score = 29.1 bits (62), Expect = 1.5
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 13 QESYCVDCGKFFCNKYSLAVHLREHS---EHVGKRYECDDCGLKYYTRRSI-------VR 62
++ +CV C K F + + H+R HS + GK + LK +R I +
Sbjct: 47 RKHFCVICEKQFSSGKAYGGHVRIHSIEYNNKGKMKKMKKMKLKKKKKRKIGLVKKEKEK 106
Query: 63 HITSAHLGGATEHKCPRCDKIFATAHHKRRHMR 95
I A + +C C K F T H HMR
Sbjct: 107 EIDLARTDVEGKIRCCLCGKEFQTMHSLFGHMR 139
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.3 bits (65), Expect = 0.67
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 20 CGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHI 64
C + K+S+ L+ H +H GK CG + + + HI
Sbjct: 335 CSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHI 379
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 94 MRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGE 132
++L+ E P C IC F L+ H+R H E
Sbjct: 231 LQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDE 269
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.3 bits (65), Expect = 0.67
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 20 CGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHI 64
C + K+S+ L+ H +H GK CG + + + HI
Sbjct: 335 CSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHI 379
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 94 MRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGE 132
++L+ E P C IC F L+ H+R H E
Sbjct: 231 LQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDE 269
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 29.9 bits (64), Expect = 0.89
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 11/66 (16%)
Query: 75 HKCPRCDKIF----ATAHHKRRHMRLK---HESKKMP----RDKICEICASSFTSSKMLK 123
+KC C K F A HK H L K P + +C +C SF + + L
Sbjct: 75 YKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALG 134
Query: 124 AHIRTH 129
H R H
Sbjct: 135 GHKRCH 140
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 29.9 bits (64), Expect = 0.89
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 109 CEICASSFTSSKMLKAHIRTHTG 131
C IC + FTS + L H+R H G
Sbjct: 263 CGICGAEFTSGQALGGHMRRHRG 285
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K KY++ + HS+ G K Y+CD CG + R S + H
Sbjct: 133 GEKKWKCEKCSK----KYAVQSDWKAHSKICGTKEYKCD-CGTLFSRRDSFITH 181
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 17 CVDCGKFFCN----KYSLAVHLREHSEHVGKRYECDDCGLKYY-TRRSIVRHITSAHLGG 71
C +CG FCN K SLA + + + CDDC +K R S+ SA
Sbjct: 658 CYNCGSVFCNSCTSKKSLAAAMAPKTNRPYR--VCDDCYIKLEGIRESLATPANSARFSN 715
Query: 72 ATEHKCPRCDKIFAT 86
A+ D+I T
Sbjct: 716 ASLPSSYEMDEIGIT 730
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 75 HKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHI 126
+KC C + F H HM++ + S P C +C S + L+ H+
Sbjct: 15 NKCAACYRQFNKLEHLVEHMKISYHSGHEP---TCGVCKKHCRSFESLREHL 63
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K KY++ + HS+ G K Y CD CG + R S + H
Sbjct: 172 GEKKWKCDKCSK----KYAVQSDCKAHSKTCGTKEYRCD-CGTLFSRRDSFITH 220
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 39 EHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFA 85
+H K+++CD C KY + H + G E++C C +F+
Sbjct: 170 KHGEKKWKCDKCSKKYAVQSDCKAHSKTC---GTKEYRCD-CGTLFS 212
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.1 bits (62), Expect = 1.5
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 75 HKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTS 118
+KC C + F H HMR+ + S P IC SF S
Sbjct: 6 NKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDS 49
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 75 HKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKI 108
HKC CD++F T HMR KH + + I
Sbjct: 93 HKCTICDQMFGTGQALGGHMR-KHRTSMITEQSI 125
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 95 RLKHESKKMPRDKICEICASSFTSSKMLKAHIRTH 129
++KH +K+ K C IC F + + L H+R H
Sbjct: 82 QVKHRNKENDMHK-CTICDQMFGTGQALGGHMRKH 115
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K KY++ + HS+ G K Y+CD CG + R S + H
Sbjct: 135 GEKKWKCDKCSK----KYAVQSDWKAHSKICGTKEYKCD-CGTLFSRRDSFITH 183
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 39 EHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFA 85
+H K+++CD C KY + H + + G E+KC C +F+
Sbjct: 133 KHGEKKWKCDKCSKKYAVQSDWKAH---SKICGTKEYKCD-CGTLFS 175
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.1 bits (62), Expect = 1.5
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 67 AHLGGATEHKCPRCDKIF----ATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKML 122
++L + HKC C K F A H+R H +K +K+ + + E+ SK+
Sbjct: 35 SNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIK---EKLSKQEFSEVYP---RKSKLQ 88
Query: 123 KAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRL 156
K R + Y C VC F L H +L
Sbjct: 89 K---RPESSSSCYECKVCGKIFGCYRGLGGHTKL 119
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 73 TEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLK 123
+ +KC C+K F + H RL H K +P+ + E +S SS+ K
Sbjct: 443 SSYKCSICEKSFVCSQALGSHQRL-HRWKLVPKPEYIEDDSSLLDSSEAKK 492
Score = 27.1 bits (57), Expect = 6.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 135 YVCPVCEATFAHSGTLYNHKRLMHGRALEK 164
Y C +CE +F S L +H+RL + + K
Sbjct: 445 YKCSICEKSFVCSQALGSHQRLHRWKLVPK 474
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 96 LKHESKKMPRDKI-CEICASSFTSSKMLKAHIRTH 129
L+ + +K R C IC SF S+ L +H R H
Sbjct: 433 LRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLH 467
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 120 KMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKR 155
+ L+ H + G +P+ C +C FA G H++
Sbjct: 247 RTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEK 282
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 29.1 bits (62), Expect = 1.5
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 58 RSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFT 117
R++ H H G C C K+ A R H K + +C +C S F
Sbjct: 214 RTLQTHYKRKH--GHKPFSCRLCGKLLAVKGDWRTH------EKNCGKRWVC-VCGSDFK 264
Query: 118 SSKMLKAHIRTH-TGERPYVCPVCEATFAHS 147
+ LK H++ +G PY + E ++S
Sbjct: 265 HKRSLKDHVKAFGSGHGPYPTGLFEEQASNS 295
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 28.7 bits (61), Expect = 2.0
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 17 CVDCGKFFCNKYSLAVHLRE-HSEHVGKR-------YEC--DDCGLKYYTRRSIVRHITS 66
C C + + L++H+ E H + YEC + CGLK+ T ++ RH+
Sbjct: 173 CSVCSRVYPTSRLLSIHISEAHDSFFQAKVSRGYDMYECLVEGCGLKFKTYKARHRHLID 232
Query: 67 AHLGGATEH--KCPRCDKIFATAHHKRRHMRLKHESKK 102
H T K + K ++ +LKHE K
Sbjct: 233 KHKFPTTFEFFKKTQLSKKRREKLQRQHVSKLKHEEDK 270
>At4g35610.1 68417.m05058 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 271
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 90 KRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTH 129
K++ L H K P +C IC F S K + H+R H
Sbjct: 124 KKKAKELTHPPKGPP---VCHICGRGFGSWKAVFGHMRAH 160
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 107 KICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHG 159
K C IC S+ + H++ G+ ++C C F + Y H R +HG
Sbjct: 1717 KECPICKSTIEKTDGCN-HLQCRCGK--HICWTCLDVFTQAEPCYAHLRTIHG 1766
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 28.7 bits (61), Expect = 2.0
Identities = 38/150 (25%), Positives = 53/150 (35%), Gaps = 24/150 (16%)
Query: 17 CVDCGKFFCNKYSLAVHLREHS-EHVGKRYECDDCGLKYY--TRRSIVRHITSAHLGGAT 73
C C K F + +L +H R H+ K+ + K Y S V H S LG T
Sbjct: 83 CEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRALGDLT 142
Query: 74 EHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGER 133
K +H KH KK C+ C+ + KAH +T G +
Sbjct: 143 GIK---------------KHYYRKHGEKKWK----CDKCSKRYAVQSDWKAHSKT-CGTK 182
Query: 134 PYVCPVCEATFAHSGTLYNHKRLMHGRALE 163
Y C C F+ + H+ A E
Sbjct: 183 EYRCD-CGTLFSRRDSFITHRAFCDALAQE 211
Score = 27.9 bits (59), Expect = 3.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K +Y++ + HS+ G K Y CD CG + R S + H
Sbjct: 153 GEKKWKCDKCSK----RYAVQSDWKAHSKTCGTKEYRCD-CGTLFSRRDSFITH 201
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 35 REHSEHVGKRYECDDCGLKYYTRRSIVRHI 64
RE GK YEC C LK++ +++ H+
Sbjct: 73 REKQTKDGKEYECRFCSLKFFKSQALGGHM 102
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 28.3 bits (60), Expect = 2.7
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 74 EHKCPRCDKIF----ATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTH 129
++KC C K F A HK H + + S E+ +S ++S + ++ +
Sbjct: 96 DYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQ---ELSNNSHSNSGSVVINVTVN 152
Query: 130 TGE------RPYVCPVCEATFAHSGTLYNHKR 155
TG + + C +C +FA L HKR
Sbjct: 153 TGNGVSQSGKIHTCSICFKSFASGQALGGHKR 184
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 114 SSFTSSKMLKAHIRTHT--GER--PYVCPVCEATFAHSGTLYNHKRLMH 158
S F S K ++ RTH+ E+ PY CP C + F S H MH
Sbjct: 221 SDFDSGKDIEYDGRTHSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMH 269
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 107 KICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHG 159
K C IC S+ + H++ G+ ++C C F Y H R +HG
Sbjct: 1720 KECPICKSTIEKTDGCN-HMKCRCGK--HICWTCLDVFTQEEPCYAHLRTIHG 1769
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 58 RSIVRHITSAHLGGATEHKC-PRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSF 116
R++ H H GA +C +C+K FA R H K + C +C S F
Sbjct: 171 RTLQTHYKRKH--GAKPFRCRKKCEKTFAVRGDWRTH------EKNCGKLWFC-VCGSDF 221
Query: 117 TSSKMLKAHIR 127
+ LK H+R
Sbjct: 222 KHKRSLKDHVR 232
>At4g33940.1 68417.m04816 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 262
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 97 KHESKKMPRDKICEICASSFT 117
K ES+ P D +C IC SFT
Sbjct: 62 KIESESPPEDDVCPICFGSFT 82
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 97 KHESKKMPRDKICEICASSFTSSKMLKAHIRTHT 130
K++S + P C ICA + SSK + H+++ +
Sbjct: 58 KNKSNEAPMLYTCAICAKGYRSSKAHEQHLQSRS 91
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 97 KHESKKMPRDKICEICASSFTSSKMLKAHIRTHT 130
K++S + P C ICA + SSK + H+++ +
Sbjct: 58 KNKSNEAPMLYTCAICAKGYRSSKAHEQHLQSRS 91
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 45 YECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESK 101
Y C C ++YT ++ H H TE++ R +I ++ H+R + K+ K
Sbjct: 117 YFCGVCDRRFYTNEKLINHFKQIH---ETENQ-KRMRQIESSKGHRRVRLVAKYSMK 169
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 134 PYVCPVCEATFAHSGTLYNHKRLMH 158
PY C VC+ F + L NH + +H
Sbjct: 116 PYFCGVCDRRFYTNEKLINHFKQIH 140
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 100 SKKMPRDKICEICASSFTSSKMLKAHIRTHTGER 133
S R ICE C F++++ L H+ H +R
Sbjct: 14 SGSQARPYICEFCERGFSNAQALGGHMNIHRKDR 47
Score = 27.1 bits (57), Expect = 6.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 133 RPYVCPVCEATFAHSGTLYNHKRL 156
RPY+C CE F+++ L H +
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNI 42
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 120 KMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKR 155
+ L+ H + G RP+ C C FA G H++
Sbjct: 325 RTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK 360
Score = 26.6 bits (56), Expect = 8.3
Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Query: 58 RSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFT 117
R++ H H G C RC K FA R H K + C C S F
Sbjct: 325 RTLQTHYKRKH--GVRPFACRRCGKAFAVKGDWRTH------EKNCGKLWYCS-CGSDFK 375
Query: 118 SSKMLKAHIR 127
+ LK H++
Sbjct: 376 HKRSLKDHVK 385
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 27.9 bits (59), Expect = 3.6
Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 12/84 (14%)
Query: 76 KCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPY 135
KC C K+F + H R H+ K K ++ K K H
Sbjct: 195 KCETCGKVFKSYQALGGH-RASHKKNKACMTKTEQVETEYVLGVKEKKVH---------- 243
Query: 136 VCPVCEATFAHSGTLYNHKRLMHG 159
CP+C F L HKR HG
Sbjct: 244 ECPICFRVFTSGQALGGHKR-SHG 266
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 90 KRRHMRLKHESKKMPRDKICEICASSFTSSKMLKAHIRTHTGER 133
K+R L H K C C +F S L H++ H ER
Sbjct: 64 KKRDTVLIHPPKDNKISHTCRFCKRNFKSCFALGGHMKCHKKER 107
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 76 KCPRCDKIFATAHHKRRHMRLKHESKKMPRD 106
KC +C + F + + RRH R+ +K +D
Sbjct: 62 KCEKCSREFCSPVNFRRHNRMHRRQRKPEKD 92
>At4g14200.1 68417.m02191 expressed protein
Length = 784
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 6 AHSGDGGQESYCVDCGKFFCNKYSLAVHLREHSEHVG--KRYECDDCGLK 53
++S GG+ C CG + N + A + R H + G K +E D +K
Sbjct: 8 SNSPGGGKNHVCTKCGWSYSNPHPSAKNRRAHKKICGTIKGFEIFDSEMK 57
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K KY++ + HS+ G K Y CD CG + + S + H
Sbjct: 141 GEKKWKCDKCSK----KYAVMSDWKAHSKICGTKEYRCD-CGTLFSRKDSFITH 189
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 39 EHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFA 85
+H K+++CD C KY H + + G E++C C +F+
Sbjct: 139 KHGEKKWKCDKCSKKYAVMSDWKAH---SKICGTKEYRCD-CGTLFS 181
>At3g26550.1 68416.m03314 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 681
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 125 HIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHGRALE 163
H R Y C C+A F HS + H+ + G+ LE
Sbjct: 293 HQRVDNNYGAYSCGKCDAYFVHSKCAF-HRNVWDGKELE 330
>At3g12270.1 68416.m01532 protein arginine N-methyltransferase
family protein similar to protein arginine
N-methyltransferase 3 from {Rattus norvegicus}
SP|O70467, {Homo sapiens} SP|O60678
Length = 590
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 132 ERPYVCPVCEATFAHSGTLYNHKRLMHG 159
E ++C C++ F L+ H RL HG
Sbjct: 48 ESDFLCLFCDSHFVSCDLLFEHCRLSHG 75
>At2g46495.1 68415.m05788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 99 ESKKMPR---DKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCE 141
ES+++P D +C IC S + S + ++ H R E P P C+
Sbjct: 307 ESRRLPGNNDDIVCPICLSEYASKETVRPH-RCGPLEVPIRFPFCD 351
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K +Y++ + HS+ G K Y CD CG + R S + H
Sbjct: 155 GEKKWKCEKCSK----RYAVQSDWKAHSKTCGTKEYRCD-CGTIFSRRDSYITH 203
>At5g16470.1 68418.m01925 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 104
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 65 TSAHLGGATEHKCPRC-----DKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFTSS 119
T GG +++CP C D HH+ +H +L +E PR+ + E A+ SS
Sbjct: 37 TGKEKGGHAKYECPHCKITVPDLKTMQIHHESKHPKLTYEE---PRN-LHEALAAPAESS 92
Query: 120 K 120
K
Sbjct: 93 K 93
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 105 RDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKR 155
R+ I A + L+ H + G +P++C C FA G H++
Sbjct: 271 RNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEK 321
Score = 27.1 bits (57), Expect = 6.2
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
Query: 58 RSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFT 117
R++ H H G C +C K FA R H K + C IC S F
Sbjct: 286 RTLQTHYKRKH--GIKPFMCRKCGKAFAVRGDWRTH------EKNCGKLWYC-ICGSDFK 336
Query: 118 SSKMLKAHIR 127
+ LK HI+
Sbjct: 337 HKRSLKDHIK 346
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/61 (24%), Positives = 24/61 (39%)
Query: 100 SKKMPRDKICEICASSFTSSKMLKAHIRTHTGERPYVCPVCEATFAHSGTLYNHKRLMHG 159
+KK C IC F + L H+R H E+ V + + T+ K+ G
Sbjct: 79 NKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTALKKFSSG 138
Query: 160 R 160
+
Sbjct: 139 K 139
>At2g01620.1 68415.m00088 expressed protein
Length = 292
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 76 KCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEIC 112
KC C+K + T H RRH ++ P + CE C
Sbjct: 242 KCRFCNKPYCTNHSSRRHEIAITDAASRPSFE-CEAC 277
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 37 HSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFA 85
+ +H K+++CD C +Y + H + G E++C C IF+
Sbjct: 150 YRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC---GTKEYRCD-CGTIFS 194
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 11 GGQESYCVDCGKFFCNKYSLAVHLREHSEHVG-KRYECDDCGLKYYTRRSIVRH 63
G ++ C C K +Y++ + HS+ G K Y CD CG + R S + H
Sbjct: 154 GEKKWKCDKCSK----RYAVQSDWKAHSKTCGTKEYRCD-CGTIFSRRDSYITH 202
>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles:PF05495 CHY zinc
finger, PF00097 zinc finger, C3HC4 type (RING finger)
Length = 291
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 15 SYCVDC-GKFFCNKYSLAVHLREHSEHVGKRYECDDCGL 52
S C C GK+FC+K + K+Y CD+CG+
Sbjct: 92 SNCGVCMGKYFCSKCKFF-----DDDLSKKQYHCDECGI 125
>At4g11560.1 68417.m01853 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 587
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 25 CNKYS-LAVHLRE--HSEHVGKRY--ECDDCGLKYYTRRSIVRHIT 65
C++ S L V LR+ + H G RY EC DCG +Y R V +T
Sbjct: 492 CSRCSQLTVGLRDIIQAGH-GDRYQLECVDCGYSWYASRDEVSTLT 536
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 59 SIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKK 102
S++ +++ AT H CP C F HMR +H S+K
Sbjct: 69 SLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMR-RHRSEK 111
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 4 LSAHSGDGGQESYCVDCGK---FFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRS 59
L S G C CG+ F C++ +++++ G Y C +C + Y ++S
Sbjct: 678 LICRSSTAGDWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGLEYVCPNCSVSNYRKKS 736
>At3g02790.1 68416.m00271 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 105
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Query: 65 TSAHLGGATEHKCPRCDKIFATA------HHKRRHMRLKHESKKM 103
T GG +++CP C KI A HH+ +H + +E K+
Sbjct: 37 TGKEKGGHAKYECPHC-KITAPGLKTMQIHHESKHPNIIYEESKL 80
>At2g04680.1 68415.m00478 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 657
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 61 VRHITSAHLGGATEHKCPRCDKIFATAHHKRRH 93
++HITS ++KC C++ F H K H
Sbjct: 186 LKHITSEEAPDYADNKCLLCEEEFDQQHPKIHH 218
>At1g25570.1 68414.m03174 leucine-rich repeat protein-related
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to light
repressible receptor protein kinase [Arabidopsis
thaliana] gi|1321686|emb|CAA66376
Length = 628
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 5 SAHSGDG-GQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRH 63
S++ DG GQ V+ G+ C H+++ G+ ++ D+ + RS+ R
Sbjct: 181 SSYDADGTGQNVLLVNYGRLSCGSDQWGPGFTNHTDNFGRSWQSDE-DFRSEDSRSVARS 239
Query: 64 ITS 66
+++
Sbjct: 240 LST 242
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 26.6 bits (56), Expect = 8.3
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 10/79 (12%)
Query: 58 RSIVRHITSAHLGGATEHKCPRCDKIFATAHHKRRHMRLKHESKKMPRDKICEICASSFT 117
R++ H H G+ C +C K A R H K + C C S F
Sbjct: 250 RTLQTHYKRKH--GSKPFSCGKCGKALAVKGDWRTH------EKNCGKLWYCT-CGSDFK 300
Query: 118 SSKMLKAHIRTH-TGERPY 135
+ LK HIR+ +G P+
Sbjct: 301 HKRSLKDHIRSFGSGHSPH 319
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.325 0.135 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,228,830
Number of Sequences: 28952
Number of extensions: 169743
Number of successful extensions: 993
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 782
Number of HSP's gapped (non-prelim): 274
length of query: 164
length of database: 12,070,560
effective HSP length: 76
effective length of query: 88
effective length of database: 9,870,208
effective search space: 868578304
effective search space used: 868578304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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