Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001660-TA|BGIBMGA001660-PA|IPR007087|Zinc finger,
C2H2-type
(240 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26192| Best HMM Match : zf-C2H2 (HMM E-Value=0) 35 0.052
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.85
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.85
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_3592| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_29933| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.5
SB_24580| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 2.0
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.6
SB_45205| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.6
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.6
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.4
SB_48438| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_45201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50428| Best HMM Match : zf-C2H2 (HMM E-Value=2e-16) 29 4.5
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.5
SB_43175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_33029| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.5
SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.5
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.5
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.5
SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33) 28 6.0
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_21206| Best HMM Match : PaREP8 (HMM E-Value=2.4) 28 6.0
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.9
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.9
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.9
SB_18177| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_26192| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 777
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 132 IELSDAELGAER-ERAIRDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQG 190
I+++D G + E D T+K+YKC +C ++ NL RHL + + D+
Sbjct: 443 IKMADQSRGEKSPENTSNDSLRTEKTYKCDECGKCFNRKTNLKRHLIIHSRRKPYKCDEC 502
Query: 191 V 191
V
Sbjct: 503 V 503
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+KSYKC +C + + NL +HL + + D+ G S + + R H G
Sbjct: 520 RKSYKCDECGKCFSESGNLKKHLIIHSRRKLYKCDEFGKSFTQHYHLKTHVRIHSG 575
>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+K YKC C + + N D+H L NE R D G S + + RRH G
Sbjct: 122 EKPYKCDICGRKFSLSSNRDKHFRLHTNEKPFRCDHCGKCFTHSGNLKEHIRRHSG 177
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 151 RYTKKSYKCQKCIISYDHAINLDRHLTLSH 180
RY +K Y+C KC Y N RH++ +H
Sbjct: 466 RYLEKHYRCMKCFSVYSSRNNFLRHVSKAH 495
>SB_3590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+K YKC +C ++ + NL HL + + + D G S S A+ + R H G
Sbjct: 271 EKPYKCDECGKCFNQSANLKTHLRIHTGQKPCKCDACGKSFNQSGALKRHLRIHSG 326
>SB_37102| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 618
Score = 31.1 bits (67), Expect = 0.85
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 149 DPRYTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ 189
D + +K ++C +C++S+ +L RHL + N + ++
Sbjct: 332 DGEHGEKPFRCTQCVMSFTRPSDLQRHLLIHSNSKPYKCEE 372
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEV-ALRLDQGVSLFSSVAIANYRRRHVGLGCS 212
+K Y C +C +S+ H L H+ H+ + + D+ + F + ++ R+HV C
Sbjct: 829 EKPYVCNRCGVSFRHDSTLTMHIRTRHDHLRPFKCDECGNTFGRL---SHLRKHVRKVCG 885
Query: 213 DER 215
+ R
Sbjct: 886 NRR 888
>SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 194
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 133 ELSDAE-LGAERERAIRDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-G 190
EL D E + E +A+ ++K Y+C +C + + L RHL + + R D+ G
Sbjct: 25 ELFDLEKIAKEASKALN---LSEKPYECGECGMGFTRHAYLKRHLRIHSGQKPYRCDECG 81
Query: 191 VSLFSSVAIANYRRRHVG 208
S A+ + R H G
Sbjct: 82 KGFTQSGALNRHLRIHSG 99
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSVAIANYRRRHVGLGCSD 213
K+ +KC KC S+ + L H+ HN + D F A ++H+ + C
Sbjct: 126 KRPFKCDKCWWSFKNPSGLREHIKAVHNSEKFKCDYCEKDFK---YAKSLKQHIEVHCDP 182
Query: 214 ERL 216
+R+
Sbjct: 183 KRV 185
>SB_3592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 293
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 155 KSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
K YKC +C Y+ +L RHL + + D+ G S A+ ++ R H G
Sbjct: 128 KPYKCNECGKCYNQTSSLKRHLRTHTGQKPYKCDECGKCFNQSGALNSHLRIHSG 182
>SB_29933| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 420
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLD 188
+K Y+C KC + ++NL RHL + + + D
Sbjct: 293 QKPYECDKCGKCFSESVNLKRHLMIDTGQKPYKCD 327
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLD 188
+K Y+C +C+ + + NL RHL + + + D
Sbjct: 349 QKPYECDECVECFSESGNLKRHLMIHTGQKPYKCD 383
>SB_24580| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 366
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+K YKC +C ++ + NL HL + + + D+ G V + + + H G
Sbjct: 199 QKPYKCDECGKCFNQSANLKTHLRIHSGQKPYKCDECGKCFIQYVDLKRHLKIHTG 254
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 152 YTKKSYKCQKCIISYDHAINLDRHLTLSHNE 182
+ +K +KC C +S+ I+L RH+ +H +
Sbjct: 509 HQEKPFKCSDCKMSFRQRISLQRHVIKTHGQ 539
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 155 KSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLF-SSVAIANYRRRHVG 208
K +KC C ++ + L RH+ L H + D F S A+A ++ H G
Sbjct: 870 KPFKCDTCEKAFRSSSELTRHVKLVHVKKPFPCDTCKQAFRSEDALARHKNTHAG 924
>SB_45205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
KK YKC +C + + L HL + + + D+ G S A+ + R H G
Sbjct: 271 KKPYKCDECGNCFSESGQLKVHLRIHSGQEPYKCDECGKCFTQSGALTTHLRIHTG 326
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
KK YKC +C + L HL + + D+ G S A+ + R H G
Sbjct: 131 KKPYKCDECGKCFTRHAQLKAHLVIHSGKKPYECDKCGKCFNQSGALTTHLRTHTG 186
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSVAIANYRRRHVGLGCSD 213
+K YKC C + + +L RH+ H + A + ++ FS + RHV GC
Sbjct: 661 EKPYKCDVCKKIFGLSSSLSRHIRTVHQDKAFKCERCEKKFSQ---PYHLTRHV-KGCHK 716
Query: 214 ER 215
E+
Sbjct: 717 EK 718
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 139 LGAERERAIRDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALR 186
L + R IR + K++KC++C + +L RH+ H E A++
Sbjct: 675 LSSSLSRHIRTV-HQDKAFKCERCEKKFSQPYHLTRHVKGCHKEKAMK 721
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSVA-IANYRRRH 206
+ +Y CQ C ++ NLD+HL L E + Q F++ + +A++ R H
Sbjct: 444 RNAYVCQTCDKTFSSKSNLDQHLKLHTGERPYQCTQCEKGFNAKSHLADHLRTH 497
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 152 YTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALR 186
+T+K Y+C+ C +S+ + L++H L+H + + R
Sbjct: 411 FTEKPYQCESCSMSFPRSSCLNKH-RLTHMDTSER 444
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 139 LGAERERAIRDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLF-SSV 197
+ + R R +R + K Y C +C S+ + +L RHL E R ++ F SS
Sbjct: 332 VSSNRARHMRSHKNIKP-YSCSQCEWSFTTSSDLKRHLKTHTGEKPYRCEECDKAFSSSC 390
Query: 198 AIANYRRRHVGL 209
++ +++ H +
Sbjct: 391 GLSTHKKIHFNI 402
>SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 646
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 152 YTK-KSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+TK K YKC +C ++ HA +L H+ E + Q G + + + + R H G
Sbjct: 383 HTKYKPYKCTQCGKAFAHASSLTEHMRTHSGEKPHKCTQCGKAFARASVLTRHMRTHSG 441
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNE 182
+K +KC +C ++ HA NL +H+ + E
Sbjct: 582 EKPHKCTQCGKAFVHASNLTKHMRIHSGE 610
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVGLGCS 212
++ +KC C SY NL HL + N+ G S F ++ N++ +V
Sbjct: 643 QEKWKCNWCEKSYTRKSNLTAHLKMHKNKKPFSCKACGKSFFYESSLVNHKCMNVSSTDK 702
Query: 213 DERL 216
DE +
Sbjct: 703 DESI 706
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSVAIANYRRRH 206
K+ Y+CQ+C SY L+ H SH V + G S SS + + RRH
Sbjct: 210 KRPYQCQECGKSYRLRSELNYH-ERSHKCVFPCKECGKSFRSSYLLEVHLRRH 261
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 155 KSYKCQKCIISYDHAINLDRHLTLSHNE 182
+ + C++C + AI L RHL LSH E
Sbjct: 579 EKFVCEQCDKKFITAIQLKRHLWLSHEE 606
>SB_48438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 147 IRDP-RYTKKSYKCQKCIISYDHAINLDRH 175
+RDP RY + Y C C S+ ++L++H
Sbjct: 290 VRDPARYARSLYTCGVCFKSFKSRVSLEQH 319
>SB_45201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
KK YKC +C + L HL + + D+ G S A+ + R H G
Sbjct: 131 KKPYKCDECGKCFTRHAQLKAHLVIHSGKKPYECDKCGKCFNQSGALTTHLRTHTG 186
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
KK YKC +C + + L RHL + E + D G S + + R H G
Sbjct: 271 KKPYKCDECGNCFSESGKLKRHLMIHTGEKPHKCDDCGKRFTQSGDLKTHLRIHTG 326
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVA 184
+K+Y+C C + + ++ RH+ ++H ++A
Sbjct: 447 EKAYQCDHCDMRFSRTNDVTRHVQVAHTDIA 477
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 131 VIELSDAELGAERERAIRDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHN 181
V++ + AE++ A +KK Y+C +C ++ +L RH HN
Sbjct: 62 VVDDIQKQANAEQQMADDVTACSKKIYQCDQCSKTFTRPHDLRRHTKSIHN 112
>SB_50428| Best HMM Match : zf-C2H2 (HMM E-Value=2e-16)
Length = 66
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNE 182
+K Y+C+ C +++H+ NL H+ L E
Sbjct: 2 EKPYQCEYCHQAFNHSSNLKNHMRLHTGE 30
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSVAIANYRRRHV 207
+K YKC +C + H+ L+ HL + + + D+ FS A R+HV
Sbjct: 200 QKPYKCHECGKCFTHSGALNSHLRIHTGQKPYKCDECDKCFSE---AGSLRKHV 250
>SB_43175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVA 184
+K+YKC +C ++ + NL HLT+ + A
Sbjct: 196 QKTYKCDECGECFNQSRNLKTHLTIHSGQKA 226
>SB_33029| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 927
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFS 195
+K YKC +C + + NL +HL + R D+ F+
Sbjct: 240 QKPYKCDECGKCFSESGNLKKHLVIHSRRKPYRCDECCECFT 281
>SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1239
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 151 RYTKKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
R + S+KC KC +++ L H+ +H++ + DQ G S S ++A + H G
Sbjct: 1107 RLHEGSFKCPKCPMTFPRRSRLAVHVR-THSDKVFQCDQCGKSFRHSRSLARHELLHSG 1164
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSV-AIANYRRRHVG 208
KK +KC C ++ NL HL + E + F+ ++A +RR H G
Sbjct: 759 KKEHKCDTCGKQFNSFANLKGHLRIHTGEKPYTCEFCQRSFTEYSSLAKHRRAHTG 814
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGVSLFSSVAIANYRRRHV 207
+K YKC +C + H+ L+ HL + + + D+ FS A R+HV
Sbjct: 165 QKPYKCHECGKCFTHSGALNSHLRIHTGQKPYKCDECDKCFSE---AGSLRKHV 215
>SB_18526| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 322
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 153 TKKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
++K YKC +C + ++ + L RHL + + + D+ G + ++R H G
Sbjct: 46 SEKPYKCDECGMGFNQSGALKRHLRIHSGQKPYKCDECGKCCTLHTHLKTHQRIHSG 102
>SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 62 EPEDVEVKEVVAENTPEVND---FYNETAEFPEAQGCEEMKEDGWNLELVGGREEMKKD 117
E E+VE+K E T E ND YNE E +G EE + N E G EE + D
Sbjct: 379 EEEEVEIKRGYGEETGEENDKEAGYNEKEEVDIERGYEEETGEE-NDEEAGYDEEEEVD 436
>SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33)
Length = 644
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQGV 191
+K YKC +C + A L++H L E +L + V
Sbjct: 407 EKPYKCSECDRGFKQASQLNQHYRLHTGEKPYKLSEAV 444
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 59 VKIEPEDVEVKEVVAENTPEVNDFYNET--AEFPEAQGCEEMKEDGWNLELVGGREEMKK 116
V++E E + E + E+ F E+ E PE QG E K+D + + ++E+ +
Sbjct: 3473 VRLEEEWQNLNEQANDKRKELKSFLGESDEQEMPEDQGDPEKKKDNGKVNMPEFKKELAR 3532
Query: 117 D 117
+
Sbjct: 3533 N 3533
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+K YKC +C ++ A NL H+ E + Q G + + + + R H G
Sbjct: 515 EKPYKCTQCGKAFARAFNLTTHMRTHSGEKPYKCTQCGKAFAWAFNLTTHMRTHSG 570
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 154 KKSYKCQKCIISYDHAINLDRHLTLSHNEVALRLDQ-GVSLFSSVAIANYRRRHVG 208
+K YKC +C ++ A NL H+ E + Q G + + + + R H G
Sbjct: 543 EKPYKCTQCGKAFAWAFNLTTHMRTHSGEKPYKCTQCGKAFAHNGVLTTHMRTHSG 598
>SB_21206| Best HMM Match : PaREP8 (HMM E-Value=2.4)
Length = 589
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 57 CEVKIEPEDVEVKEVVAENTPEVNDFYNETAEFPEAQGCEEMKEDGW 103
C++K++ ED E E A+NT ++ Y+ + + + +KE +
Sbjct: 524 CKLKLKEEDSEFSETNADNTQLHSNLYHMIRDDTTPEALQRIKESNF 570
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 155 KSYKCQKCIISYDHAINLDRHLTLSHN 181
K Y C++C + A NL +HL HN
Sbjct: 548 KPYACEQCDACFAQAGNLKKHLNRWHN 574
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 156 SYKCQKCIISYDHAINLDRHLTLSHNE 182
++KC C + A+NL+RH+ L HN+
Sbjct: 562 AFKCNTCDKRFCSAVNLNRHM-LCHNQ 587
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 148 RDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHN 181
R P+ T YKC KC SY + +H+ HN
Sbjct: 2588 RSPQ-TPIEYKCNKCSNSYVSFSEMKKHMRTVHN 2620
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 148 RDPRYTKKSYKCQKCIISYDHAINLDRHLTLSHN 181
R P+ T YKC KC SY + +H+ HN
Sbjct: 2786 RSPQ-TPIEYKCNKCSNSYVSFSEMKKHMRTVHN 2818
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 153 TKKSYKCQKCIISYDHAINLDRHLTLSHN 181
T YKC KC SY + +H++ HN
Sbjct: 3092 TPIEYKCNKCSNSYVSFSEMKKHMSTVHN 3120
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 153 TKKSYKCQKCIISYDHAINLDRHLTLSHN 181
T YKC KC SY + +H++ HN
Sbjct: 4223 TPIEYKCNKCSNSYVSFSEMKKHMSTVHN 4251
>SB_18177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 10 LLKKTDLFLKRVEQCCSILQGKTSQFKKV 38
LL++T+L LK+ ++ C + T+Q K+V
Sbjct: 75 LLRETNLTLKKTDEICRASKSPTAQMKEV 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,374,425
Number of Sequences: 59808
Number of extensions: 271727
Number of successful extensions: 1115
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 905
Number of HSP's gapped (non-prelim): 234
length of query: 240
length of database: 16,821,457
effective HSP length: 80
effective length of query: 160
effective length of database: 12,036,817
effective search space: 1925890720
effective search space used: 1925890720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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