Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001659-TA|BGIBMGA001659-PA|IPR007087|Zinc finger,
C2H2-type
(157 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 34 0.009
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 29 0.25
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.43
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 28 0.57
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 28 0.75
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 0.99
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 27 1.3
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 27 1.3
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 27 1.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 4.0
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 25 4.0
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 25 5.3
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 25 5.3
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 25 5.3
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 25 5.3
SPCC584.14 |mug160||conserved eukaryotic protein|Schizosaccharom... 25 7.0
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 25 7.0
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 24 9.3
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 24 9.3
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 34.3 bits (75), Expect = 0.009
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 99 PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRH 154
PY+C+ C G+ + LKRHLR EN VCE C FN + H +R+
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLR----IHENGRPYVCE-CLKRFNRLDALNRHKQRN 522
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 29.5 bits (63), Expect = 0.25
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRH 154
+ C +C + + L+RH+R H + VC IC F+ + + H R H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEK---PFVC-ICGKRFSRRDNLRQHERLH 473
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.7 bits (61), Expect = 0.43
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 8 KSSPNDTDVKVESDSSDLETALPLSQIKEKKRKNAVR-GMCAIKKTKTEMTSDASPYMDE 66
+S+ D D+++ES S++E+ P K K +KN + + + + D P DE
Sbjct: 6 RSTQRDADLELESLQSEIESESPQPVTKSKAKKNKKKLNKASAFNSDNDSNYDLKPEDDE 65
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 28.3 bits (60), Expect = 0.57
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 5 ENGKSSPNDTDVKVESDSSDLETALPLSQIKEKKRKNAVRGMCAIKKTKTE 55
E ND ++K++ +++ + A P+ +EK + ++ G ++ K+E
Sbjct: 832 EKASKGSNDDEMKIDKKTTEEKEATPMEMDEEKSQDISINGNSKKEEPKSE 882
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 27.9 bits (59), Expect = 0.75
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEI--CKSTFNDKRSYVPHHRRH 154
Y+C +C+ G+++ LK H +R VC+ C FN + + H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERP----FVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 27.5 bits (58), Expect = 0.99
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTF 141
YKC+ G K K H R N+ +C C S+F
Sbjct: 17 YKCD--FQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSF 56
Score = 27.1 bits (57), Expect = 1.3
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 102 CEDCIVGYNKDVFLKRHLRERHIKRENA 129
C C + + L RH+ ++H+K+ +A
Sbjct: 49 CPHCSSSFTRSDVLNRHVNQKHVKQNDA 76
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 27.1 bits (57), Expect = 1.3
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 12 NDTDVKVESDSSDLETALPLSQIKEKKRKNAVRGMCAIKKTKTEMTSDASPYMDESYVG 70
+D + KVE+ + A+ + +KKR+ +++T ++ D ++DE Y G
Sbjct: 64 HDEEKKVEARIEFDKVAIAYGVLSDKKRRKHYDKTGQLRETDADIDFDWKEWLDELYQG 122
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 27.1 bits (57), Expect = 1.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 8 KSSPNDTDVKVESDSSDLETALPLSQIKEKKRK---NAVRGMCAIKKTKTEMTSDASPYM 64
K P+ + + SSD P S + NAV+ +C+ KK+K ++T+ M
Sbjct: 137 KEKPDASSINTNRSSSDNGFLTPSSSPRSPSCSRVFNAVQ-LCSPKKSKDDITTPKKRLM 195
Query: 65 DESY 68
+++Y
Sbjct: 196 EDTY 199
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 26.6 bits (56), Expect = 1.7
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 ENGKSSPNDTDVKVESDSSDLETALPLSQIKEK--KRKNAVRGMCAIKKTKTEMTSDASP 62
EN + TDVKVE +LP+ Q K+ K N + + + +T + T+
Sbjct: 394 ENPVDTDKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQ 453
Query: 63 YMDES 67
++ E+
Sbjct: 454 FLHEA 458
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 4.0
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 101 KCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRR-HFI 156
KCE C + D L +H RE+H + D + F + S H + H+I
Sbjct: 246 KCEFCNTHFYDDDELFKHCREKHERCYICDQVAGRPTHQYFKNYDSLERHFEKDHYI 302
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 4.0
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 15 DVKVESDSSDLETALPLSQIKEKKRKNAVRGMCAIKKTKTEMTSD 59
+ + DS+DL +P ++K K ++ A + A K E+T++
Sbjct: 60 ETSISKDSADLNLPVPRLRVKGKPQELAQKWAEAFPKDLVEVTAN 104
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 5.3
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 5 ENGKSSPNDTDVKVESDS--SDLETALPLSQIKEK 37
E G++SP ++ VK+ S S + +TAL L+++ K
Sbjct: 348 EGGETSPENSKVKIYSSSIANSEKTALRLAKLASK 382
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 25.0 bits (52), Expect = 5.3
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKREN 128
+ C C + + L RH+++ H++++N
Sbjct: 56 FSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.0 bits (52), Expect = 5.3
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 6/35 (17%)
Query: 10 SPNDTDVKVESDSSDLETALPLSQIKEK-KRKNAV 43
S ND+D +SDSS +PLSQ+++K +++N+V
Sbjct: 442 SENDSDSDSDSDSS-----VPLSQLQKKSQQRNSV 471
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.0 bits (52), Expect = 5.3
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 13 DTDVKVESDSSDLETALPLSQIKEKKRKNAVRGMCAIKKTKTEMTSDAS 61
+ D+K D+ETA + +KK+KN KK K + D+S
Sbjct: 88 EEDLKSSETGKDVETAAAAAAAAKKKKKNK-------KKVKAKKVGDSS 129
>SPCC584.14 |mug160||conserved eukaryotic
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 24.6 bits (51), Expect = 7.0
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 13 DTDVKVESDSS------DLETALPLSQIKEKKRKNAVRGMCAIKKTKTEMTSDASPYMDE 66
DT + +++D S + ET+ P S I E AV KKT E T +S + E
Sbjct: 258 DTTISLKNDDSSSLGDMEFETSQPSSSISEIIHLLAVLDKRIPKKTLVEKTYASSMELQE 317
Query: 67 SY 68
Y
Sbjct: 318 LY 319
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 24.6 bits (51), Expect = 7.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 10 SPNDTDVKVESDSSDLETALPLSQIKEKKRKNAV 43
+P D + VE S+L+T Q++E +++N V
Sbjct: 193 NPTDENSAVEIPESELQTFFTQQQLQELEQENDV 226
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 9.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 12 NDTDVKVESDSSDLETALPLSQIKEKKR 39
+D+D + +SDS A S+IK K++
Sbjct: 236 SDSDTERQSDSGSKNVARQFSRIKRKRK 263
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 24.2 bits (50), Expect = 9.3
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 115 LKRHLRERHIKRENADVIVCEICKSTFNDKRSYVP 149
L H++ + KR N +C C+ FN++ Y P
Sbjct: 902 LSEHIQYQ--KRRNIIPPLCHTCRQPFNEQDVYKP 934
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,088
Number of Sequences: 5004
Number of extensions: 24363
Number of successful extensions: 102
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 21
length of query: 157
length of database: 2,362,478
effective HSP length: 67
effective length of query: 90
effective length of database: 2,027,210
effective search space: 182448900
effective search space used: 182448900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)
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