GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001659-TA|BGIBMGA001659-PA|IPR007087|Zinc finger,
C2H2-type
         (157 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    38   2e-04
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    31   0.013
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   3.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   4.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   5.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 37.5 bits (83), Expect = 2e-04
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERH-----IKRENADVIVCEICKSTFNDKRSYVPHHRR 153
           PYKC+ C   + +   LKRH+   H          A   +C  CK  F  K + + H   
Sbjct: 382 PYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAM 441

Query: 154 H 154
           H
Sbjct: 442 H 442



 Score = 31.1 bits (67), Expect = 0.017
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRH 154
           ++C+ C     +   L+ H++  H   +    I C+ C STF D+ SY  H + H
Sbjct: 298 FQCKLCPTTCGRKTDLRIHVQNLHTADKP---IKCKRCDSTFPDRYSYKMHAKTH 349



 Score = 27.9 bits (59), Expect = 0.16
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDK 144
           PY C+ C   + +   LK H     +   N  V  C++C +T   K
Sbjct: 267 PYSCDVCFARFTQSNSLKAHKMIHQV--GNKPVFQCKLCPTTCGRK 310



 Score = 25.8 bits (54), Expect = 0.64
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHH 151
           Y C  C    NK   L RHL+  H +      +VCE    T    +++V  H
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLK-THSEDRPHKCVVCERGFKTLASLQNHVNTH 177



 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/53 (20%), Positives = 21/53 (39%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHH 151
           P++C+ C   +     L RH+R RH          C+      +  + ++  H
Sbjct: 182 PHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTH 234


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 31.5 bits (68), Expect = 0.013
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 100 YKCEDCIVGYNKDVFLKRHLRERH-IKRENADVIVCEICKSTFNDKRSYVPHHR 152
           ++C  C + Y   +  ++H  E H I  EN   I C IC   F+ ++ Y  H R
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFG-IKCTICHKLFSQRQDYQLHMR 401


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVP 149
           P+ C DC + + + +    H+  R     N   I    CK  +N +RSY+P
Sbjct: 715 PFVC-DCNIDWLQKI---NHVTSRQYPTIND--IETVYCKLMYNRERSYIP 759


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 119 LRERHIKRENADVIVCEICKSTFNDK 144
           LR+ H  RE     VC+ CK   + K
Sbjct: 381 LRKGHSARECRSTYVCQQCKRKHHSK 406


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 24  DLETALPLSQIKEKKRKNAVRGM 46
           D+ET LPL  +++K  K  +R +
Sbjct: 575 DVETFLPLDYLQKKPLKERLRNI 597


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,509
Number of Sequences: 2123
Number of extensions: 4588
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 10
length of query: 157
length of database: 516,269
effective HSP length: 59
effective length of query: 98
effective length of database: 391,012
effective search space: 38319176
effective search space used: 38319176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)